RNA–Protein interactions for RNA: ENST00000449709.1

HMGB3P8-201, Transcript of high mobility group box 3 pseudogene 8, humanhuman

BASIC

Gene HMGB3P8, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P8-201ENST00000449709 FTCDO95954 541 aa3.57□□□□□ -1.84
HMGB3P8-201ENST00000449709 BMP15O95972 392 aa3.57□□□□□ -1.84
HMGB3P8-201ENST00000449709 AGR2O95994 175 aa3.57□□□□□ -1.84
HMGB3P8-201ENST00000449709 IL18BPO95998 194 aa3.57□□□□□ -1.84
HMGB3P8-201ENST00000449709 BCL10O95999 233 aa3.57□□□□□ -1.84
HMGB3P8-201ENST00000449709 IGHV2-70P01814 119 aa3.57□□□□□ -1.84
HMGB3P8-201ENST00000449709 SLC4A1P02730 911 aa3.57□□□□□ -1.84
HMGB3P8-201ENST00000449709 CSTBP04080 98 aaKnown RBP3.57□□□□□ -1.84
HMGB3P8-201ENST00000449709 SERPING1P05155 500 aa3.57□□□□□ -1.84
HMGB3P8-201ENST00000449709 MPOP05164 745 aa3.57□□□□□ -1.84
HMGB3P8-201ENST00000449709 URODP06132 367 aa3.57□□□□□ -1.84
HMGB3P8-201ENST00000449709 YES1P07947 543 aa3.57□□□□□ -1.84
HMGB3P8-201ENST00000449709 SERPINA6P08185 405 aa3.57□□□□□ -1.84
HMGB3P8-201ENST00000449709 ASNSP08243 561 aa3.57□□□□□ -1.84
HMGB3P8-201ENST00000449709 LTA4HP09960 611 aaKnown RBP3.57□□□□□ -1.84
HMGB3P8-201ENST00000449709 WEE2P0C1S8 567 aa3.57□□□□□ -1.84
HMGB3P8-201ENST00000449709 SUPT20HL2P0C7V6 817 aa3.57□□□□□ -1.84
HMGB3P8-201ENST00000449709 SMIM6P0DI80 62 aa3.57□□□□□ -1.84
HMGB3P8-201ENST00000449709 CYP2C8P10632 490 aa3.57□□□□□ -1.84
HMGB3P8-201ENST00000449709 CETPP11597 493 aa3.57□□□□□ -1.84
HMGB3P8-201ENST00000449709 KRT10P13645 584 aa3.57□□□□□ -1.84
HMGB3P8-201ENST00000449709 GFAPP14136 432 aa3.57□□□□□ -1.84
HMGB3P8-201ENST00000449709 IL1R1P14778 569 aa3.57□□□□□ -1.84
HMGB3P8-201ENST00000449709 ZNF182P17025 639 aaPredicted RBP3.57□□□□□ -1.84
HMGB3P8-201ENST00000449709 IFNAR1P17181 557 aa3.57□□□□□ -1.84
HMGB3P8-201ENST00000449709 EN2P19622 333 aaPredicted RBP3.57□□□□□ -1.84
HMGB3P8-201ENST00000449709 NCF2P19878 526 aaPredicted RBP3.57□□□□□ -1.84
HMGB3P8-201ENST00000449709 MALP21145 153 aa3.57□□□□□ -1.84
HMGB3P8-201ENST00000449709 DNAJB1P25685 340 aa3.57□□□□□ -1.84
HMGB3P8-201ENST00000449709 IVDP26440 423 aa3.57□□□□□ -1.84
HMGB3P8-201ENST00000449709 ERP29P30040 261 aaKnown RBP3.57□□□□□ -1.84
HMGB3P8-201ENST00000449709 SLC7A1P30825 629 aa3.57□□□□□ -1.84
HMGB3P8-201ENST00000449709 CYP2C18P33260 490 aa3.57□□□□□ -1.84
HMGB3P8-201ENST00000449709 ETV6P41212 452 aa3.57□□□□□ -1.84
HMGB3P8-201ENST00000449709 GRIA1P42261 906 aa3.57□□□□□ -1.84
HMGB3P8-201ENST00000449709 RPS5P46782 204 aaKnown RBP3.57□□□□□ -1.84
HMGB3P8-201ENST00000449709 RAP1GAPP47736 663 aa3.57□□□□□ -1.84
HMGB3P8-201ENST00000449709 ARCN1P48444 511 aaKnown RBP3.57□□□□□ -1.84
HMGB3P8-201ENST00000449709 KCNC1P48547 511 aa3.57□□□□□ -1.84
HMGB3P8-201ENST00000449709 PSMD8P48556 350 aa3.57□□□□□ -1.84
HMGB3P8-201ENST00000449709 HSPA7P48741 367 aa3.57□□□□□ -1.84
HMGB3P8-201ENST00000449709 NUMBP49757 651 aa3.57□□□□□ -1.84
HMGB3P8-201ENST00000449709 MEOX2P50222 304 aa3.57□□□□□ -1.84
HMGB3P8-201ENST00000449709 PSMD4P55036 377 aaKnown RBP3.57□□□□□ -1.84
HMGB3P8-201ENST00000449709 CDH4P55283 916 aa3.57□□□□□ -1.84
HMGB3P8-201ENST00000449709 SUMO3P55854 103 aaPredicted RBP3.57□□□□□ -1.84
HMGB3P8-201ENST00000449709 YWHAEP62258 255 aaKnown RBP3.57□□□□□ -1.84
HMGB3P8-201ENST00000449709 CCNA1P78396 465 aa3.57□□□□□ -1.84
HMGB3P8-201ENST00000449709 HTRA4P83105 476 aaPredicted RBP3.57□□□□□ -1.84
HMGB3P8-201ENST00000449709 ZNF200P98182 395 aaPredicted RBP3.57□□□□□ -1.84
HMGB3P8-201ENST00000449709 SCN7AQ01118 1682 aa3.57□□□□□ -1.84
HMGB3P8-201ENST00000449709 GNA12Q03113 381 aa3.57□□□□□ -1.84
HMGB3P8-201ENST00000449709 CAV1Q03135 178 aa3.57□□□□□ -1.84
HMGB3P8-201ENST00000449709 TLE1Q04724 770 aa3.57□□□□□ -1.84
HMGB3P8-201ENST00000449709 PPATQ06203 517 aa3.57□□□□□ -1.84
HMGB3P8-201ENST00000449709 CALCOCO2Q13137 446 aa3.57□□□□□ -1.84
HMGB3P8-201ENST00000449709 TUBB3Q13509 450 aa3.57□□□□□ -1.84
HMGB3P8-201ENST00000449709 GPR50Q13585 617 aa3.57□□□□□ -1.84
HMGB3P8-201ENST00000449709 SLC12A1Q13621 1099 aa3.57□□□□□ -1.84
HMGB3P8-201ENST00000449709 RAB39AQ14964 217 aa3.57□□□□□ -1.84
HMGB3P8-201ENST00000449709 PPA1Q15181 289 aa3.57□□□□□ -1.84
HMGB3P8-201ENST00000449709 TAF12Q16514 161 aa3.57□□□□□ -1.84
HMGB3P8-201ENST00000449709 CCNG2Q16589 344 aa3.57□□□□□ -1.84
HMGB3P8-201ENST00000449709 GEN1Q17RS7 908 aa3.57□□□□□ -1.84
HMGB3P8-201ENST00000449709 TYSND1Q2T9J0 566 aa3.57□□□□□ -1.84
HMGB3P8-201ENST00000449709 WSCD2Q2TBF2 565 aa3.57□□□□□ -1.84
HMGB3P8-201ENST00000449709 PARP15Q460N3 678 aa3.57□□□□□ -1.84
HMGB3P8-201ENST00000449709 SETMARQ53H47 684 aaPredicted RBP3.57□□□□□ -1.84
HMGB3P8-201ENST00000449709 C19orf54Q5BKX5 351 aa3.57□□□□□ -1.84
HMGB3P8-201ENST00000449709 RILPL1Q5EBL4 403 aa3.57□□□□□ -1.84
HMGB3P8-201ENST00000449709 RABGAP1LQ5R372 815 aa3.57□□□□□ -1.84
HMGB3P8-201ENST00000449709 KRT79Q5XKE5 535 aa3.57□□□□□ -1.84
HMGB3P8-201ENST00000449709 C11orf63Q6NUN7 778 aa3.57□□□□□ -1.84
HMGB3P8-201ENST00000449709 IYDQ6PHW0 289 aa3.57□□□□□ -1.84
HMGB3P8-201ENST00000449709 C5orf46Q6UWT4 87 aa3.57□□□□□ -1.84
HMGB3P8-201ENST00000449709 ABHD15Q6UXT9 468 aa3.57□□□□□ -1.84
HMGB3P8-201ENST00000449709 ZNF782Q6ZMW2 699 aaPredicted RBP3.57□□□□□ -1.84
HMGB3P8-201ENST00000449709 PDZD4Q76G19 769 aaPredicted RBP3.57□□□□□ -1.84
HMGB3P8-201ENST00000449709 CXXC5Q7LFL8 322 aaKnown RBP3.57□□□□□ -1.84
HMGB3P8-201ENST00000449709 ZER1Q7Z7L7 766 aa3.57□□□□□ -1.84
HMGB3P8-201ENST00000449709 NEK8Q86SG6 692 aa3.57□□□□□ -1.84
HMGB3P8-201ENST00000449709 GALNT10Q86SR1 603 aa3.57□□□□□ -1.84
HMGB3P8-201ENST00000449709 ATG4DQ86TL0 474 aaPredicted RBP3.57□□□□□ -1.84
HMGB3P8-201ENST00000449709 NT5DC3Q86UY8 548 aa3.57□□□□□ -1.84
HMGB3P8-201ENST00000449709 SLC22A16Q86VW1 577 aa3.57□□□□□ -1.84
HMGB3P8-201ENST00000449709 ARHGEF19Q8IW93 802 aa3.57□□□□□ -1.84
HMGB3P8-201ENST00000449709 DSELQ8IZU8 1212 aa3.57□□□□□ -1.84
HMGB3P8-201ENST00000449709 RBFAQ8N0V3 343 aa3.57□□□□□ -1.84
HMGB3P8-201ENST00000449709 LGI2Q8N0V4 545 aa3.57□□□□□ -1.84
HMGB3P8-201ENST00000449709 TTC5Q8N0Z6 440 aa3.57□□□□□ -1.84
HMGB3P8-201ENST00000449709 BCL6BQ8N143 479 aaPredicted RBP3.57□□□□□ -1.84
HMGB3P8-201ENST00000449709 DPP10Q8N608 796 aa3.57□□□□□ -1.84
HMGB3P8-201ENST00000449709 ARFGAP1Q8N6T3 406 aa3.57□□□□□ -1.84
HMGB3P8-201ENST00000449709 CCDC185Q8N715 623 aa3.57□□□□□ -1.84
HMGB3P8-201ENST00000449709 FAM71DQ8N9W8 422 aa3.57□□□□□ -1.84
HMGB3P8-201ENST00000449709 ZNF527Q8NB42 609 aa3.57□□□□□ -1.84
HMGB3P8-201ENST00000449709 SRFBP1Q8NEF9 429 aaKnown RBP3.57□□□□□ -1.84
HMGB3P8-201ENST00000449709 OR7G3Q8NG95 312 aa3.57□□□□□ -1.84
HMGB3P8-201ENST00000449709 OR5T2Q8NGG2 359 aa3.57□□□□□ -1.84
HMGB3P8-201ENST00000449709 OLIG1Q8TAK6 271 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms