RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 TRIM62Q9BVG3 475 aa12.2□□□□□ -0.46
UBE3B-204ENST00000449510 LRTM1Q9HBL6 345 aa12.2□□□□□ -0.46
UBE3B-204ENST00000449510 DYRK4Q9NR20 520 aa12.2□□□□□ -0.46
UBE3B-204ENST00000449510 RAB23Q9ULC3 237 aa12.2□□□□□ -0.46
UBE3B-204ENST00000449510 OR6C70A6NIJ9 312 aa12.2□□□□□ -0.46
UBE3B-204ENST00000449510 SLC22A1O15245 554 aa12.2□□□□□ -0.46
UBE3B-204ENST00000449510 GPX3P22352 226 aa12.2□□□□□ -0.46
UBE3B-204ENST00000449510 CDH12P55289 794 aa12.2□□□□□ -0.46
UBE3B-204ENST00000449510 GALNT2Q10471 571 aa12.2□□□□□ -0.46
UBE3B-204ENST00000449510 SELPLGQ14242 412 aa12.2□□□□□ -0.46
UBE3B-204ENST00000449510 ZNF284Q2VY69 593 aa12.2□□□□□ -0.46
UBE3B-204ENST00000449510 FAM117BQ6P1L5 589 aa12.2□□□□□ -0.46
UBE3B-204ENST00000449510 BLOC1S3Q6QNY0 202 aa12.2□□□□□ -0.46
UBE3B-204ENST00000449510 SYVN1Q86TM6 617 aa12.2□□□□□ -0.46
UBE3B-204ENST00000449510 KBTBD8Q8NFY9 601 aa12.2□□□□□ -0.46
UBE3B-204ENST00000449510 C1GALT1C1Q96EU7 318 aa12.2□□□□□ -0.46
UBE3B-204ENST00000449510 ART5Q96L15 291 aa12.2□□□□□ -0.46
UBE3B-204ENST00000449510 PPP3R2Q96LZ3 170 aa12.2□□□□□ -0.46
UBE3B-204ENST00000449510 GSTO2Q9H4Y5 243 aa12.2□□□□□ -0.46
UBE3B-204ENST00000449510 SP140LQ9H930 580 aa12.2□□□□□ -0.46
UBE3B-204ENST00000449510 CNOT11Q9UKZ1 510 aaKnown RBP12.2□□□□□ -0.46
UBE3B-204ENST00000449510 PLCH1Q4KWH8 1693 aa12.2□□□□□ -0.46
UBE3B-204ENST00000449510 SMIM10L2AP0DMW4 78 aa12.2□□□□□ -0.46
UBE3B-204ENST00000449510 SMIM10L2BP0DMW5 78 aa12.2□□□□□ -0.46
UBE3B-204ENST00000449510 PTPN5P54829 565 aa12.2□□□□□ -0.46
UBE3B-204ENST00000449510 PFKPQ01813 784 aa12.2□□□□□ -0.46
UBE3B-204ENST00000449510 POM121L1PQ3SYA9 428 aa12.2□□□□□ -0.46
UBE3B-204ENST00000449510 RBM48Q5RL73 367 aaKnown RBP12.2□□□□□ -0.46
UBE3B-204ENST00000449510 DESI1Q6ICB0 168 aa12.2□□□□□ -0.46
UBE3B-204ENST00000449510 PLEKHG7Q6ZR37 379 aa12.2□□□□□ -0.46
UBE3B-204ENST00000449510 EIF3MQ7L2H7 374 aaKnown RBP12.2□□□□□ -0.46
UBE3B-204ENST00000449510 ADCK2Q7Z695 626 aa12.2□□□□□ -0.46
UBE3B-204ENST00000449510 GHDCQ8N2G8 530 aa12.2□□□□□ -0.46
UBE3B-204ENST00000449510 CENPIQ92674 756 aaPredicted RBP12.2□□□□□ -0.46
UBE3B-204ENST00000449510 HDAC2Q92769 488 aaKnown RBP12.2□□□□□ -0.46
UBE3B-204ENST00000449510 C12orf42Q96LP6 360 aa12.2□□□□□ -0.46
UBE3B-204ENST00000449510 NECTIN4Q96NY8 510 aa12.2□□□□□ -0.46
UBE3B-204ENST00000449510 SERPINB11Q96P15 392 aa12.2□□□□□ -0.46
UBE3B-204ENST00000449510 CIPCQ9C0C6 399 aa12.2□□□□□ -0.46
UBE3B-204ENST00000449510 ZBTB20Q9HC78 741 aaPredicted RBP12.2□□□□□ -0.46
UBE3B-204ENST00000449510 TLR8Q9NR97 1041 aaKnown RBP12.2□□□□□ -0.46
UBE3B-204ENST00000449510 IGSF5Q9NSI5 407 aa12.2□□□□□ -0.46
UBE3B-204ENST00000449510 CACNA1CQ13936 2221 aa12.19□□□□□ -0.46
UBE3B-204ENST00000449510 A0A1W2PQ72 361 aa12.19□□□□□ -0.46
UBE3B-204ENST00000449510 FAM234BA2RU67 622 aa12.19□□□□□ -0.46
UBE3B-204ENST00000449510 ZNF197O14709 1029 aa12.19□□□□□ -0.46
UBE3B-204ENST00000449510 APOL3O95236 402 aa12.19□□□□□ -0.46
UBE3B-204ENST00000449510 OTCP00480 354 aa12.19□□□□□ -0.46
UBE3B-204ENST00000449510 CDKN1CP49918 316 aaPredicted RBP12.19□□□□□ -0.46
UBE3B-204ENST00000449510 ACSM2AQ08AH3 577 aa12.19□□□□□ -0.46
UBE3B-204ENST00000449510 GANABQ14697 944 aaKnown RBP12.19□□□□□ -0.46
UBE3B-204ENST00000449510 ACSM2BQ68CK6 577 aa12.19□□□□□ -0.46
UBE3B-204ENST00000449510 VTCN1Q7Z7D3 282 aa12.19□□□□□ -0.46
UBE3B-204ENST00000449510 CRYBG2Q8N1P7 616 aa12.19□□□□□ -0.46
UBE3B-204ENST00000449510 FAM86B1Q8N7N1 296 aa12.19□□□□□ -0.46
UBE3B-204ENST00000449510 CDKN2AIPNLQ96HQ2 116 aa12.19□□□□□ -0.46
UBE3B-204ENST00000449510 MRGPRX2Q96LB1 330 aa12.19□□□□□ -0.46
UBE3B-204ENST00000449510 TRNT1Q96Q11 434 aaKnown RBP12.19□□□□□ -0.46
UBE3B-204ENST00000449510 NEURL2Q9BR09 285 aa12.19□□□□□ -0.46
UBE3B-204ENST00000449510 PAAF1Q9BRP4 392 aa12.19□□□□□ -0.46
UBE3B-204ENST00000449510 CRTAC1Q9NQ79 661 aa12.19□□□□□ -0.46
UBE3B-204ENST00000449510 UBA2Q9UBT2 640 aaPredicted RBP12.19□□□□□ -0.46
UBE3B-204ENST00000449510 ATP6V1HQ9UI12 483 aa12.19□□□□□ -0.46
UBE3B-204ENST00000449510 PRMT5O14744 637 aaPredicted RBP12.19□□□□□ -0.46
UBE3B-204ENST00000449510 TULP3O75386 442 aa12.19□□□□□ -0.46
UBE3B-204ENST00000449510 RFPL2O75678 378 aa12.19□□□□□ -0.46
UBE3B-204ENST00000449510 RPP40O75818 363 aaKnown RBP12.19□□□□□ -0.46
UBE3B-204ENST00000449510 CHRNA1P02708 482 aa12.19□□□□□ -0.46
UBE3B-204ENST00000449510 MAGEA6P43360 314 aa12.19□□□□□ -0.46
UBE3B-204ENST00000449510 OR1E2P47887 323 aa12.19□□□□□ -0.46
UBE3B-204ENST00000449510 ACADVLP49748 655 aa12.19□□□□□ -0.46
UBE3B-204ENST00000449510 EEFSECP57772 596 aaKnown RBP12.19□□□□□ -0.46
UBE3B-204ENST00000449510 CTXN3Q4LDR2 81 aa12.19□□□□□ -0.46
UBE3B-204ENST00000449510 ELMSAN1Q6PJG2 1045 aa12.19□□□□□ -0.46
UBE3B-204ENST00000449510 PLET1Q6UQ28 207 aa12.19□□□□□ -0.46
UBE3B-204ENST00000449510 LARP4Q71RC2 724 aaKnown RBP eCLIP12.19□□□□□ -0.46
UBE3B-204ENST00000449510 TMEM199Q8N511 208 aa12.19□□□□□ -0.46
UBE3B-204ENST00000449510 OR4F6Q8NGB9 312 aa12.19□□□□□ -0.46
UBE3B-204ENST00000449510 MTERF1Q99551 399 aaKnown RBP12.19□□□□□ -0.46
UBE3B-204ENST00000449510 ARMC1Q9NVT9 282 aa12.19□□□□□ -0.46
UBE3B-204ENST00000449510 IL37Q9NZH6 218 aa12.19□□□□□ -0.46
UBE3B-204ENST00000449510 GMIPQ9P107 970 aa12.19□□□□□ -0.46
UBE3B-204ENST00000449510 PRELID1Q9Y255 219 aa12.19□□□□□ -0.46
UBE3B-204ENST00000449510 MYO9BQ13459 2157 aa12.19□□□□□ -0.46
UBE3B-204ENST00000449510 MAP1BP46821 2468 aaKnown RBP12.19□□□□□ -0.46
UBE3B-204ENST00000449510 ZSCAN5BA6NJL1 495 aa12.19□□□□□ -0.46
UBE3B-204ENST00000449510 FGF10O15520 208 aaPredicted RBP12.19□□□□□ -0.46
UBE3B-204ENST00000449510 SLC7A4O43246 635 aa12.19□□□□□ -0.46
UBE3B-204ENST00000449510 CREG1O75629 220 aa12.19□□□□□ -0.46
UBE3B-204ENST00000449510 SLC25A14O95258 325 aaPredicted RBP12.19□□□□□ -0.46
UBE3B-204ENST00000449510 DARSP14868 501 aaKnown RBP12.19□□□□□ -0.46
UBE3B-204ENST00000449510 SLC15A1P46059 708 aa12.19□□□□□ -0.46
UBE3B-204ENST00000449510 IRF8Q02556 426 aa12.19□□□□□ -0.46
UBE3B-204ENST00000449510 GHRHRQ02643 423 aa12.19□□□□□ -0.46
UBE3B-204ENST00000449510 LRRC73Q5JTD7 316 aa12.19□□□□□ -0.46
UBE3B-204ENST00000449510 Q6ZPB1 254 aaPredicted RBP12.19□□□□□ -0.46
UBE3B-204ENST00000449510 PTCHD4Q6ZW05 846 aa12.19□□□□□ -0.46
UBE3B-204ENST00000449510 MFSD6LQ8IWD5 586 aa12.19□□□□□ -0.46
UBE3B-204ENST00000449510 OR8H1Q8NGG4 311 aa12.19□□□□□ -0.46
UBE3B-204ENST00000449510 TMEM125Q96AQ2 219 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms