RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 FAM8A1Q9UBU6 413 aa18.84■□□□□ 0.61
RPS28-202ENST00000449223 MOSPD1Q9UJG1 213 aa18.84■□□□□ 0.61
RPS28-202ENST00000449223 PCOLCE2Q9UKZ9 415 aa18.84■□□□□ 0.61
RPS28-202ENST00000449223 GPSM3Q9Y4H4 160 aa18.84■□□□□ 0.61
RPS28-202ENST00000449223 PCDHGA2Q9Y5H1 932 aa18.84■□□□□ 0.61
RPS28-202ENST00000449223 ZNF318Q5VUA4 2279 aa18.83■□□□□ 0.61
RPS28-202ENST00000449223 A8MT66 165 aa18.83■□□□□ 0.6
RPS28-202ENST00000449223 PRR5-ARHGAP8B1AHC4 643 aa18.83■□□□□ 0.6
RPS28-202ENST00000449223 TRIM13O60858 407 aa18.83■□□□□ 0.6
RPS28-202ENST00000449223 H2AFYO75367 372 aaKnown RBP18.83■□□□□ 0.6
RPS28-202ENST00000449223 TNFP01375 233 aa18.83■□□□□ 0.6
RPS28-202ENST00000449223 FGF3P11487 239 aaPredicted RBP18.83■□□□□ 0.6
RPS28-202ENST00000449223 ITPKAP23677 461 aa18.83■□□□□ 0.6
RPS28-202ENST00000449223 HOXD12P35452 270 aa18.83■□□□□ 0.6
RPS28-202ENST00000449223 AP1S2P56377 157 aa18.83■□□□□ 0.6
RPS28-202ENST00000449223 SRSF5Q13243 272 aaKnown RBP18.83■□□□□ 0.6
RPS28-202ENST00000449223 PHKG1Q16816 387 aa18.83■□□□□ 0.6
RPS28-202ENST00000449223 CAPRIN2Q6IMN6 1127 aaKnown RBP18.83■□□□□ 0.6
RPS28-202ENST00000449223 SPATS2Q86XZ4 545 aaKnown RBP18.83■□□□□ 0.6
RPS28-202ENST00000449223 GPBAR1Q8TDU6 330 aa18.83■□□□□ 0.6
RPS28-202ENST00000449223 SREK1Q8WXA9 508 aaKnown RBP18.83■□□□□ 0.6
RPS28-202ENST00000449223 SKA1Q96BD8 255 aa18.83■□□□□ 0.6
RPS28-202ENST00000449223 FOPNLQ96NB1 174 aa18.83■□□□□ 0.6
RPS28-202ENST00000449223 ZDHHC5Q9C0B5 715 aa18.83■□□□□ 0.6
RPS28-202ENST00000449223 KLF15Q9UIH9 416 aa18.83■□□□□ 0.6
RPS28-202ENST00000449223 PDE10AQ9Y233 779 aa18.83■□□□□ 0.6
RPS28-202ENST00000449223 DNAJC16Q9Y2G8 782 aa18.83■□□□□ 0.6
RPS28-202ENST00000449223 ANKRD12Q6UB98 2062 aa18.83■□□□□ 0.6
RPS28-202ENST00000449223 PRR33A8MZF0 331 aa18.82■□□□□ 0.6
RPS28-202ENST00000449223 STX16-NPEPL1H3BU86 382 aa18.82■□□□□ 0.6
RPS28-202ENST00000449223 UBXN8O00124 270 aa18.82■□□□□ 0.6
RPS28-202ENST00000449223 STX16O14662 325 aa18.82■□□□□ 0.6
RPS28-202ENST00000449223 FFAR2O15552 330 aa18.82■□□□□ 0.6
RPS28-202ENST00000449223 SMIM24O75264 130 aa18.82■□□□□ 0.6
RPS28-202ENST00000449223 CSF2P04141 144 aa18.82■□□□□ 0.6
RPS28-202ENST00000449223 NME1P15531 152 aaKnown RBP18.82■□□□□ 0.6
RPS28-202ENST00000449223 CYP2A7P20853 494 aa18.82■□□□□ 0.6
RPS28-202ENST00000449223 IDSP22304 550 aa18.82■□□□□ 0.6
RPS28-202ENST00000449223 CTBSQ01459 385 aa18.82■□□□□ 0.6
RPS28-202ENST00000449223 ASPHQ12797 758 aa18.82■□□□□ 0.6
RPS28-202ENST00000449223 FRA10AC1Q70Z53 315 aa18.82■□□□□ 0.6
RPS28-202ENST00000449223 UBE2R2Q712K3 238 aaPredicted RBP18.82■□□□□ 0.6
RPS28-202ENST00000449223 ARMCX6Q7L4S7 300 aa18.82■□□□□ 0.6
RPS28-202ENST00000449223 TAX1BP1Q86VP1 789 aa18.82■□□□□ 0.6
RPS28-202ENST00000449223 HID1Q8IV36 788 aa18.82■□□□□ 0.6
RPS28-202ENST00000449223 ZNF75CPQ92670 426 aaPredicted RBP18.82■□□□□ 0.6
RPS28-202ENST00000449223 C1QTNF3Q9BXJ4 246 aa18.82■□□□□ 0.6
RPS28-202ENST00000449223 TMEM168Q9H0V1 697 aa18.82■□□□□ 0.6
RPS28-202ENST00000449223 MANSC1Q9H8J5 431 aa18.82■□□□□ 0.6
RPS28-202ENST00000449223 SUSD2Q9UGT4 822 aa18.82■□□□□ 0.6
RPS28-202ENST00000449223 PILRBQ9UKJ0 227 aa18.82■□□□□ 0.6
RPS28-202ENST00000449223 A0A1B0GTW7 788 aa18.81■□□□□ 0.6
RPS28-202ENST00000449223 NEMP2A6NFY4 417 aa18.81■□□□□ 0.6
RPS28-202ENST00000449223 CATP04040 527 aaKnown RBP18.81■□□□□ 0.6
RPS28-202ENST00000449223 GRK2P25098 689 aa18.81■□□□□ 0.6
RPS28-202ENST00000449223 LSP1P33241 339 aa18.81■□□□□ 0.6
RPS28-202ENST00000449223 DPP6P42658 865 aa18.81■□□□□ 0.6
RPS28-202ENST00000449223 RPIAP49247 311 aa18.81■□□□□ 0.6
RPS28-202ENST00000449223 ALDH18A1P54886 795 aaKnown RBP18.81■□□□□ 0.6
RPS28-202ENST00000449223 METTL2BQ6P1Q9 378 aaKnown RBP18.81■□□□□ 0.6
RPS28-202ENST00000449223 ABRAXAS1Q6UWZ7 409 aa18.81■□□□□ 0.6
RPS28-202ENST00000449223 NRROSQ86YC3 692 aa18.81■□□□□ 0.6
RPS28-202ENST00000449223 PHACTR4Q8IZ21 702 aa18.81■□□□□ 0.6
RPS28-202ENST00000449223 SKA2Q8WVK7 121 aaPredicted RBP18.81■□□□□ 0.6
RPS28-202ENST00000449223 L3HYPDHQ96EM0 354 aa18.81■□□□□ 0.6
RPS28-202ENST00000449223 RMDN2Q96LZ7 410 aa18.81■□□□□ 0.6
RPS28-202ENST00000449223 ERVMER34-1Q9H9K5 563 aa18.81■□□□□ 0.6
RPS28-202ENST00000449223 TSR3Q9UJK0 312 aaKnown RBP18.81■□□□□ 0.6
RPS28-202ENST00000449223 KCNK6Q9Y257 313 aa18.81■□□□□ 0.6
RPS28-202ENST00000449223 PLEKHM1Q9Y4G2 1056 aa18.81■□□□□ 0.6
RPS28-202ENST00000449223 WDR91A4D1P6 747 aa18.8■□□□□ 0.6
RPS28-202ENST00000449223 A6NCN8 305 aa18.8■□□□□ 0.6
RPS28-202ENST00000449223 ARHGEF33A8MVX0 844 aa18.8■□□□□ 0.6
RPS28-202ENST00000449223 SUPT3HB4E1H0 165 aa18.8■□□□□ 0.6
RPS28-202ENST00000449223 IFRD1O00458 451 aaPredicted RBP18.8■□□□□ 0.6
RPS28-202ENST00000449223 GALR2O43603 387 aaPredicted RBP18.8■□□□□ 0.6
RPS28-202ENST00000449223 SUPT3HO75486 399 aa18.8■□□□□ 0.6
RPS28-202ENST00000449223 C1orf105O95561 183 aa18.8■□□□□ 0.6
RPS28-202ENST00000449223 SERPINE1P05121 402 aa18.8■□□□□ 0.6
RPS28-202ENST00000449223 SLC35G4P0C7Q5 338 aa18.8■□□□□ 0.6
RPS28-202ENST00000449223 GNSP15586 552 aa18.8■□□□□ 0.6
RPS28-202ENST00000449223 IMPDH1P20839 514 aa18.8■□□□□ 0.6
RPS28-202ENST00000449223 BGNP21810 368 aa18.8■□□□□ 0.6
RPS28-202ENST00000449223 DHPSP49366 369 aaPredicted RBP18.8■□□□□ 0.6
RPS28-202ENST00000449223 NAA20P61599 178 aa18.8■□□□□ 0.6
RPS28-202ENST00000449223 ILF3Q12906 894 aaKnown RBP eCLIP18.8■□□□□ 0.6
RPS28-202ENST00000449223 SETDB1Q15047 1291 aa18.8■□□□□ 0.6
RPS28-202ENST00000449223 TEAD4Q15561 434 aa18.8■□□□□ 0.6
RPS28-202ENST00000449223 UAP1L1Q3KQV9 507 aa18.8■□□□□ 0.6
RPS28-202ENST00000449223 LAYNQ6UX15 382 aa18.8■□□□□ 0.6
RPS28-202ENST00000449223 FBXO39Q8N4B4 442 aa18.8■□□□□ 0.6
RPS28-202ENST00000449223 MCOLN3Q8TDD5 553 aa18.8■□□□□ 0.6
RPS28-202ENST00000449223 LRRC8CQ8TDW0 803 aa18.8■□□□□ 0.6
RPS28-202ENST00000449223 UBTD2Q8WUN7 234 aa18.8■□□□□ 0.6
RPS28-202ENST00000449223 ZNF317Q96PQ6 595 aaPredicted RBP18.8■□□□□ 0.6
RPS28-202ENST00000449223 TRIM54Q9BYV2 358 aa18.8■□□□□ 0.6
RPS28-202ENST00000449223 PTBP2Q9UKA9 531 aaKnown RBP18.8■□□□□ 0.6
RPS28-202ENST00000449223 KNL1Q8NG31 2342 aa18.8■□□□□ 0.6
RPS28-202ENST00000449223 SNNO75324 88 aaPredicted RBP18.79■□□□□ 0.6
RPS28-202ENST00000449223 GFAPP14136 432 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms