RNA–Protein interactions for RNA: ENST00000448935.6

VIPAS39-203, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-203ENST00000448935 ULK2Q8IYT8 1036 aa10.36□□□□□ -0.75
VIPAS39-203ENST00000448935 MCOLN3Q8TDD5 553 aa10.36□□□□□ -0.75
VIPAS39-203ENST00000448935 CSGALNACT1Q8TDX6 532 aa10.36□□□□□ -0.75
VIPAS39-203ENST00000448935 ELMO1Q92556 727 aa10.36□□□□□ -0.75
VIPAS39-203ENST00000448935 STMN2Q93045 179 aa10.36□□□□□ -0.75
VIPAS39-203ENST00000448935 RHBDF1Q96CC6 855 aa10.36□□□□□ -0.75
VIPAS39-203ENST00000448935 TUBGCP3Q96CW5 907 aa10.36□□□□□ -0.75
VIPAS39-203ENST00000448935 ZNF514Q96K75 400 aaPredicted RBP10.36□□□□□ -0.75
VIPAS39-203ENST00000448935 MAGEB10Q96LZ2 347 aaPredicted RBP10.36□□□□□ -0.75
VIPAS39-203ENST00000448935 KXD1Q9BQD3 176 aa10.36□□□□□ -0.75
VIPAS39-203ENST00000448935 WRAP53Q9BUR4 548 aaKnown RBP10.36□□□□□ -0.75
VIPAS39-203ENST00000448935 SLC25A23Q9BV35 468 aa10.36□□□□□ -0.75
VIPAS39-203ENST00000448935 C1QTNF2Q9BXJ5 285 aa10.36□□□□□ -0.75
VIPAS39-203ENST00000448935 SLC12A9Q9BXP2 914 aa10.36□□□□□ -0.75
VIPAS39-203ENST00000448935 MRPL1Q9BYD6 325 aaKnown RBP10.36□□□□□ -0.75
VIPAS39-203ENST00000448935 PLA2G2FQ9BZM2 168 aa10.36□□□□□ -0.75
VIPAS39-203ENST00000448935 SLC6A16Q9GZN6 736 aa10.36□□□□□ -0.75
VIPAS39-203ENST00000448935 DENND2DQ9H6A0 471 aaPredicted RBP10.36□□□□□ -0.75
VIPAS39-203ENST00000448935 DCLRE1BQ9H816 532 aa10.36□□□□□ -0.75
VIPAS39-203ENST00000448935 NOL11Q9H8H0 719 aaKnown RBP10.36□□□□□ -0.75
VIPAS39-203ENST00000448935 AKTIPQ9H8T0 292 aa10.36□□□□□ -0.75
VIPAS39-203ENST00000448935 PRSS16Q9NQE7 514 aa10.36□□□□□ -0.75
VIPAS39-203ENST00000448935 CLEC1BQ9P126 229 aa10.36□□□□□ -0.75
VIPAS39-203ENST00000448935 PPP6CO00743 305 aa10.36□□□□□ -0.75
VIPAS39-203ENST00000448935 CCNT2O60583 730 aaKnown RBP10.36□□□□□ -0.75
VIPAS39-203ENST00000448935 GUCA1CO95843 209 aa10.36□□□□□ -0.75
VIPAS39-203ENST00000448935 IDO1P14902 403 aa10.36□□□□□ -0.75
VIPAS39-203ENST00000448935 EPB42P16452 691 aa10.36□□□□□ -0.75
VIPAS39-203ENST00000448935 ARL1P40616 181 aaPredicted RBP10.36□□□□□ -0.75
VIPAS39-203ENST00000448935 PRLHRP49683 370 aa10.36□□□□□ -0.75
VIPAS39-203ENST00000448935 NUDT2P50583 147 aa10.36□□□□□ -0.75
VIPAS39-203ENST00000448935 CCNG1P51959 295 aa10.36□□□□□ -0.75
VIPAS39-203ENST00000448935 SLC25A3Q00325 362 aa10.36□□□□□ -0.75
VIPAS39-203ENST00000448935 TMEM115Q12893 351 aaPredicted RBP10.36□□□□□ -0.75
VIPAS39-203ENST00000448935 ENPP2Q13822 863 aa10.36□□□□□ -0.75
VIPAS39-203ENST00000448935 GTF2H3Q13889 308 aa10.36□□□□□ -0.75
VIPAS39-203ENST00000448935 BOP1Q14137 746 aaKnown RBP10.36□□□□□ -0.75
VIPAS39-203ENST00000448935 PARM1Q6UWI2 310 aa10.36□□□□□ -0.75
VIPAS39-203ENST00000448935 RNF165Q6ZSG1 346 aa10.36□□□□□ -0.75
VIPAS39-203ENST00000448935 LRRC70Q7Z2Q7 622 aa10.36□□□□□ -0.75
VIPAS39-203ENST00000448935 MMAAQ8IVH4 418 aaKnown RBP10.36□□□□□ -0.75
VIPAS39-203ENST00000448935 SKA2Q8WVK7 121 aaPredicted RBP10.36□□□□□ -0.75
VIPAS39-203ENST00000448935 ASB11Q8WXH4 323 aa10.36□□□□□ -0.75
VIPAS39-203ENST00000448935 TMEM159Q96B96 161 aa10.36□□□□□ -0.75
VIPAS39-203ENST00000448935 CCM2Q9BSQ5 444 aa10.36□□□□□ -0.75
VIPAS39-203ENST00000448935 IPPKQ9H8X2 491 aa10.36□□□□□ -0.75
VIPAS39-203ENST00000448935 MRPL40Q9NQ50 206 aaKnown RBP10.36□□□□□ -0.75
VIPAS39-203ENST00000448935 TMEM45AQ9NWC5 275 aa10.36□□□□□ -0.75
VIPAS39-203ENST00000448935 ARL15Q9NXU5 204 aa10.36□□□□□ -0.75
VIPAS39-203ENST00000448935 CDH22Q9UJ99 828 aa10.36□□□□□ -0.75
VIPAS39-203ENST00000448935 ADAMTS6Q9UKP5 1117 aa10.36□□□□□ -0.75
VIPAS39-203ENST00000448935 STON1Q9Y6Q2 735 aa10.36□□□□□ -0.75
VIPAS39-203ENST00000448935 ANKRD12Q6UB98 2062 aa10.36□□□□□ -0.75
VIPAS39-203ENST00000448935 ATP6AP2A0A1C7CYW4 349 aa10.35□□□□□ -0.75
VIPAS39-203ENST00000448935 BBIP1A8MTZ0 92 aa10.35□□□□□ -0.75
VIPAS39-203ENST00000448935 MEI4A8MW99 385 aa10.35□□□□□ -0.75
VIPAS39-203ENST00000448935 GFYI3L273 518 aa10.35□□□□□ -0.75
VIPAS39-203ENST00000448935 AIM2O14862 343 aa10.35□□□□□ -0.75
VIPAS39-203ENST00000448935 TSPAN6O43657 245 aa10.35□□□□□ -0.75
VIPAS39-203ENST00000448935 AP1G1O43747 822 aa10.35□□□□□ -0.75
VIPAS39-203ENST00000448935 STK16O75716 305 aa10.35□□□□□ -0.75
VIPAS39-203ENST00000448935 ATP6AP2O75787 350 aa10.35□□□□□ -0.75
VIPAS39-203ENST00000448935 RECQL5O94762 991 aaPredicted RBP10.35□□□□□ -0.75
VIPAS39-203ENST00000448935 SLCO2B1O94956 709 aa10.35□□□□□ -0.75
VIPAS39-203ENST00000448935 WDR47O94967 919 aa10.35□□□□□ -0.75
VIPAS39-203ENST00000448935 OR4F21O95013 312 aa10.35□□□□□ -0.75
VIPAS39-203ENST00000448935 SNRPB2P08579 225 aaKnown RBP10.35□□□□□ -0.75
VIPAS39-203ENST00000448935 EBLN1P0CF75 366 aa10.35□□□□□ -0.75
VIPAS39-203ENST00000448935 C6P13671 934 aa10.35□□□□□ -0.75
VIPAS39-203ENST00000448935 HGFP14210 728 aa10.35□□□□□ -0.75
VIPAS39-203ENST00000448935 ITGAXP20702 1163 aa10.35□□□□□ -0.75
VIPAS39-203ENST00000448935 IGFBP4P22692 258 aa10.35□□□□□ -0.75
VIPAS39-203ENST00000448935 MAP4P27816 1152 aaKnown RBP10.35□□□□□ -0.75
VIPAS39-203ENST00000448935 HMOX2P30519 316 aa10.35□□□□□ -0.75
VIPAS39-203ENST00000448935 GGT5P36269 586 aa10.35□□□□□ -0.75
VIPAS39-203ENST00000448935 GPR1P46091 355 aa10.35□□□□□ -0.75
VIPAS39-203ENST00000448935 PSMD8P48556 350 aa10.35□□□□□ -0.75
VIPAS39-203ENST00000448935 HSPA7P48741 367 aa10.35□□□□□ -0.75
VIPAS39-203ENST00000448935 MRPL19P49406 292 aaKnown RBP10.35□□□□□ -0.75
VIPAS39-203ENST00000448935 FOXA1P55317 472 aa10.35□□□□□ -0.75
VIPAS39-203ENST00000448935 PLOD1Q02809 727 aaPredicted RBP10.35□□□□□ -0.75
VIPAS39-203ENST00000448935 TBL3Q12788 808 aaKnown RBP10.35□□□□□ -0.75
VIPAS39-203ENST00000448935 PTK2BQ14289 1009 aa10.35□□□□□ -0.75
VIPAS39-203ENST00000448935 RPS6KA2Q15349 733 aa10.35□□□□□ -0.75
VIPAS39-203ENST00000448935 PHKG1Q16816 387 aa10.35□□□□□ -0.75
VIPAS39-203ENST00000448935 KIF19Q2TAC6 998 aa10.35□□□□□ -0.75
VIPAS39-203ENST00000448935 MMEL1Q495T6 779 aa10.35□□□□□ -0.75
VIPAS39-203ENST00000448935 BCL7AQ4VC05 210 aa10.35□□□□□ -0.75
VIPAS39-203ENST00000448935 AGKQ53H12 422 aa10.35□□□□□ -0.75
VIPAS39-203ENST00000448935 MILR1Q7Z6M3 343 aa10.35□□□□□ -0.75
VIPAS39-203ENST00000448935 CHPFQ8IZ52 775 aa10.35□□□□□ -0.75
VIPAS39-203ENST00000448935 DEFB107AQ8IZN7 70 aa10.35□□□□□ -0.75
VIPAS39-203ENST00000448935 PGAM4Q8N0Y7 254 aa10.35□□□□□ -0.75
VIPAS39-203ENST00000448935 MIER2Q8N344 545 aa10.35□□□□□ -0.75
VIPAS39-203ENST00000448935 FBXO27Q8NI29 283 aa10.35□□□□□ -0.75
VIPAS39-203ENST00000448935 METTL6Q8TCB7 284 aa10.35□□□□□ -0.75
VIPAS39-203ENST00000448935 FGF14Q92915 247 aa10.35□□□□□ -0.75
VIPAS39-203ENST00000448935 C3orf30Q96M34 536 aa10.35□□□□□ -0.75
VIPAS39-203ENST00000448935 FOPNLQ96NB1 174 aa10.35□□□□□ -0.75
VIPAS39-203ENST00000448935 NTMT1Q9BV86 223 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms