RNA–Protein interactions for RNA: ENST00000448745.5

CPSF7-206, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CPSF7, Length 1,749 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-206ENST00000448745 NKAPQ8N5F7 415 aaKnown RBP8.29□□□□□ -1.08
CPSF7-206ENST00000448745 FNDC5Q8NAU1 212 aa8.29□□□□□ -1.08
CPSF7-206ENST00000448745 OR2T12Q8NG77 320 aa8.29□□□□□ -1.08
CPSF7-206ENST00000448745 DYNC2LI1Q8TCX1 351 aa8.29□□□□□ -1.08
CPSF7-206ENST00000448745 MCOLN3Q8TDD5 553 aa8.29□□□□□ -1.08
CPSF7-206ENST00000448745 FAM162AQ96A26 154 aa8.29□□□□□ -1.08
CPSF7-206ENST00000448745 PCED1BQ96HM7 432 aa8.29□□□□□ -1.08
CPSF7-206ENST00000448745 SENP8Q96LD8 212 aa8.29□□□□□ -1.08
CPSF7-206ENST00000448745 NSMCE3Q96MG7 304 aa8.29□□□□□ -1.08
CPSF7-206ENST00000448745 HERC2P3Q9BVR0 1158 aa8.29□□□□□ -1.08
CPSF7-206ENST00000448745 AMBRA1Q9C0C7 1298 aa8.29□□□□□ -1.08
CPSF7-206ENST00000448745 SMURF2Q9HAU4 748 aa8.29□□□□□ -1.08
CPSF7-206ENST00000448745 SP110Q9HB58 689 aa8.29□□□□□ -1.08
CPSF7-206ENST00000448745 PARVBQ9HBI1 364 aa8.29□□□□□ -1.08
CPSF7-206ENST00000448745 CSNK1G1Q9HCP0 422 aa8.29□□□□□ -1.08
CPSF7-206ENST00000448745 SACM1LQ9NTJ5 587 aa8.29□□□□□ -1.08
CPSF7-206ENST00000448745 CXXC1Q9P0U4 656 aaPredicted RBP8.29□□□□□ -1.08
CPSF7-206ENST00000448745 DNMT3BQ9UBC3 853 aaKnown RBP8.29□□□□□ -1.08
CPSF7-206ENST00000448745 LIMD1Q9UGP4 676 aa8.29□□□□□ -1.08
CPSF7-206ENST00000448745 INTS6Q9UL03 887 aaKnown RBP8.29□□□□□ -1.08
CPSF7-206ENST00000448745 USP22Q9UPT9 525 aa8.29□□□□□ -1.08
CPSF7-206ENST00000448745 CRYL1Q9Y2S2 319 aa8.29□□□□□ -1.08
CPSF7-206ENST00000448745 PTPRDP23468 1912 aa8.28□□□□□ -1.08
CPSF7-206ENST00000448745 MYBPHLA2RUH7 354 aa8.28□□□□□ -1.08
CPSF7-206ENST00000448745 FAM47E-STBD1D6RA91 191 aa8.28□□□□□ -1.08
CPSF7-206ENST00000448745 E9PAM4 449 aa8.28□□□□□ -1.08
CPSF7-206ENST00000448745 H0Y626 953 aa8.28□□□□□ -1.08
CPSF7-206ENST00000448745 TAF4O00268 1085 aa8.28□□□□□ -1.08
CPSF7-206ENST00000448745 ASNA1O43681 348 aa8.28□□□□□ -1.08
CPSF7-206ENST00000448745 CNTN5O94779 1100 aa8.28□□□□□ -1.08
CPSF7-206ENST00000448745 TRIM16O95361 564 aa8.28□□□□□ -1.08
CPSF7-206ENST00000448745 ANGPTL1O95841 491 aa8.28□□□□□ -1.08
CPSF7-206ENST00000448745 GOT2P00505 430 aaKnown RBP8.28□□□□□ -1.08
CPSF7-206ENST00000448745 CYP11A1P05108 521 aa8.28□□□□□ -1.08
CPSF7-206ENST00000448745 FGF1P05230 155 aa8.28□□□□□ -1.08
CPSF7-206ENST00000448745 JUNDP17535 347 aa8.28□□□□□ -1.08
CPSF7-206ENST00000448745 IL1RNP18510 177 aa8.28□□□□□ -1.08
CPSF7-206ENST00000448745 HLA-DPA1P20036 260 aa8.28□□□□□ -1.08
CPSF7-206ENST00000448745 NR4A1P22736 598 aa8.28□□□□□ -1.08
CPSF7-206ENST00000448745 IGFBP6P24592 240 aaPredicted RBP8.28□□□□□ -1.08
CPSF7-206ENST00000448745 SOX11P35716 441 aa8.28□□□□□ -1.08
CPSF7-206ENST00000448745 GATMP50440 423 aa8.28□□□□□ -1.08
CPSF7-206ENST00000448745 ARSDP51689 593 aa8.28□□□□□ -1.08
CPSF7-206ENST00000448745 RABGGTBP53611 331 aa8.28□□□□□ -1.08
CPSF7-206ENST00000448745 TPTEP56180 551 aa8.28□□□□□ -1.08
CPSF7-206ENST00000448745 IL5RAQ01344 420 aa8.28□□□□□ -1.08
CPSF7-206ENST00000448745 FADDQ13158 208 aa8.28□□□□□ -1.08
CPSF7-206ENST00000448745 SELENBP1Q13228 472 aa8.28□□□□□ -1.08
CPSF7-206ENST00000448745 CDK5R2Q13319 367 aa8.28□□□□□ -1.08
CPSF7-206ENST00000448745 PPIGQ13427 754 aaKnown RBP eCLIP8.28□□□□□ -1.081e-7■■■□□ 15.3
CPSF7-206ENST00000448745 TYSND1Q2T9J0 566 aa8.28□□□□□ -1.08
CPSF7-206ENST00000448745 PGS1Q32NB8 556 aa8.28□□□□□ -1.08
CPSF7-206ENST00000448745 ADPRMQ3LIE5 342 aa8.28□□□□□ -1.08
CPSF7-206ENST00000448745 C6orf136Q5SQH8 315 aa8.28□□□□□ -1.08
CPSF7-206ENST00000448745 ZNF362Q5T0B9 420 aaPredicted RBP8.28□□□□□ -1.08
CPSF7-206ENST00000448745 SYT6Q5T7P8 510 aaPredicted RBP8.28□□□□□ -1.08
CPSF7-206ENST00000448745 MARC1Q5VT66 337 aa8.28□□□□□ -1.08
CPSF7-206ENST00000448745 FAM219BQ5XKK7 198 aa8.28□□□□□ -1.08
CPSF7-206ENST00000448745 OTOP2Q7RTS6 562 aa8.28□□□□□ -1.08
CPSF7-206ENST00000448745 TMCO2Q7Z6W1 182 aaPredicted RBP8.28□□□□□ -1.08
CPSF7-206ENST00000448745 PLD3Q8IV08 490 aa8.28□□□□□ -1.08
CPSF7-206ENST00000448745 NDNFQ8TB73 568 aa8.28□□□□□ -1.08
CPSF7-206ENST00000448745 CHAC2Q8WUX2 184 aa8.28□□□□□ -1.08
CPSF7-206ENST00000448745 FIG4Q92562 907 aa8.28□□□□□ -1.08
CPSF7-206ENST00000448745 SGCDQ92629 289 aa8.28□□□□□ -1.08
CPSF7-206ENST00000448745 RPL10LQ96L21 214 aaKnown RBP8.28□□□□□ -1.08
CPSF7-206ENST00000448745 TEX37Q96LM6 180 aa8.28□□□□□ -1.08
CPSF7-206ENST00000448745 PPM1MQ96MI6 270 aa8.28□□□□□ -1.08
CPSF7-206ENST00000448745 CASD1Q96PB1 797 aa8.28□□□□□ -1.08
CPSF7-206ENST00000448745 ZNF382Q96SR6 550 aa8.28□□□□□ -1.08
CPSF7-206ENST00000448745 YME1L1Q96TA2 773 aa8.28□□□□□ -1.08
CPSF7-206ENST00000448745 GABARAPL1Q9H0R8 117 aa8.28□□□□□ -1.08
CPSF7-206ENST00000448745 SMOC2Q9H3U7 446 aa8.28□□□□□ -1.08
CPSF7-206ENST00000448745 PIF1Q9H611 641 aa8.28□□□□□ -1.08
CPSF7-206ENST00000448745 KAT8Q9H7Z6 458 aaKnown RBP8.28□□□□□ -1.08
CPSF7-206ENST00000448745 ABCC13Q9NSE7 274 aa8.28□□□□□ -1.08
CPSF7-206ENST00000448745 TAS2R13Q9NYV9 303 aa8.28□□□□□ -1.08
CPSF7-206ENST00000448745 PRKAG2Q9UGJ0 569 aa8.28□□□□□ -1.08
CPSF7-206ENST00000448745 PCTPQ9UKL6 214 aa8.28□□□□□ -1.08
CPSF7-206ENST00000448745 TMEM98Q9Y2Y6 226 aa8.28□□□□□ -1.08
CPSF7-206ENST00000448745 IFT52Q9Y366 437 aa8.28□□□□□ -1.08
CPSF7-206ENST00000448745 UGT2A1Q9Y4X1 527 aa8.28□□□□□ -1.08
CPSF7-206ENST00000448745 TIMM22Q9Y584 194 aa8.28□□□□□ -1.08
CPSF7-206ENST00000448745 MN1Q10571 1320 aaPredicted RBP8.27□□□□□ -1.09
CPSF7-206ENST00000448745 OR51F1A6NGY5 319 aa8.27□□□□□ -1.09
CPSF7-206ENST00000448745 TTC34A8MYJ7 566 aa8.27□□□□□ -1.09
CPSF7-206ENST00000448745 FAM220BPB1ANY3 271 aa8.27□□□□□ -1.09
CPSF7-206ENST00000448745 PTGES3LE9PB15 166 aa8.27□□□□□ -1.09
CPSF7-206ENST00000448745 CXCR6O00574 342 aa8.27□□□□□ -1.09
CPSF7-206ENST00000448745 TOR1BO14657 336 aa8.27□□□□□ -1.09
CPSF7-206ENST00000448745 LDB2O43679 373 aa8.27□□□□□ -1.09
CPSF7-206ENST00000448745 NOBOXO60393 691 aa8.27□□□□□ -1.09
CPSF7-206ENST00000448745 UPK1BO75841 260 aa8.27□□□□□ -1.09
CPSF7-206ENST00000448745 RECQL5O94762 991 aaPredicted RBP8.27□□□□□ -1.09
CPSF7-206ENST00000448745 PRKD3O94806 890 aa8.27□□□□□ -1.09
CPSF7-206ENST00000448745 FKBP9O95302 570 aa8.27□□□□□ -1.09
CPSF7-206ENST00000448745 PTTG1O95997 202 aa8.27□□□□□ -1.09
CPSF7-206ENST00000448745 ATXN1LP0C7T5 689 aaKnown RBP8.27□□□□□ -1.09
CPSF7-206ENST00000448745 PCNAP12004 261 aa8.27□□□□□ -1.09
CPSF7-206ENST00000448745 AGXTP21549 392 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms