RNA–Protein interactions for RNA: ENST00000448310.1

CBX4-202, Transcript of chromobox 4, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CBX4, Length 718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-202ENST00000448310 PLEKHS1Q5SXH7 462 aa27.47■■□□□ 1.99
CBX4-202ENST00000448310 FAM69BQ5VUD6 431 aa27.47■■□□□ 1.99
CBX4-202ENST00000448310 ZNF517Q6ZMY9 492 aaPredicted RBP27.47■■□□□ 1.99
CBX4-202ENST00000448310 ACRBPQ8NEB7 543 aa27.47■■□□□ 1.99
CBX4-202ENST00000448310 HEXDCQ8WVB3 486 aa27.47■■□□□ 1.99
CBX4-202ENST00000448310 THAP4Q8WY91 577 aa27.47■■□□□ 1.99
CBX4-202ENST00000448310 PANX2Q96RD6 677 aa27.47■■□□□ 1.99
CBX4-202ENST00000448310 KLHL25Q9H0H3 589 aa27.47■■□□□ 1.99
CBX4-202ENST00000448310 FANCEQ9HB96 536 aa27.47■■□□□ 1.99
CBX4-202ENST00000448310 IGLV3-16A0A075B6K0 115 aa27.46■■□□□ 1.99
CBX4-202ENST00000448310 GRID2IPA4D2P6 1211 aa27.46■■□□□ 1.99
CBX4-202ENST00000448310 KLK3P07288 261 aaPredicted RBP27.46■■□□□ 1.99
CBX4-202ENST00000448310 ST6GAL1P15907 406 aa27.46■■□□□ 1.99
CBX4-202ENST00000448310 ACRV1P26436 265 aa27.46■■□□□ 1.99
CBX4-202ENST00000448310 PRDX3P30048 256 aaKnown RBP27.46■■□□□ 1.99
CBX4-202ENST00000448310 CETN2P41208 172 aa27.46■■□□□ 1.99
CBX4-202ENST00000448310 GPR33Q49SQ1 333 aa27.46■■□□□ 1.99
CBX4-202ENST00000448310 RAD9BQ6WBX8 426 aa27.46■■□□□ 1.99
CBX4-202ENST00000448310 ARHGEF18Q6ZSZ5 1173 aa27.46■■□□□ 1.99
CBX4-202ENST00000448310 TAS2R42Q7RTR8 314 aa27.46■■□□□ 1.99
CBX4-202ENST00000448310 KLHDC8BQ8IXV7 354 aa27.46■■□□□ 1.99
CBX4-202ENST00000448310 CLDN19Q8N6F1 224 aa27.46■■□□□ 1.99
CBX4-202ENST00000448310 LRRC57Q8N9N7 239 aa27.46■■□□□ 1.99
CBX4-202ENST00000448310 OR52E1Q8NGJ3 308 aa27.46■■□□□ 1.99
CBX4-202ENST00000448310 OR1L3Q8NH93 324 aa27.46■■□□□ 1.99
CBX4-202ENST00000448310 CPT1BQ92523 772 aa27.46■■□□□ 1.99
CBX4-202ENST00000448310 CLIP3Q96DZ5 547 aa27.46■■□□□ 1.99
CBX4-202ENST00000448310 PPP1R2P1Q96PQ5 205 aa27.46■■□□□ 1.99
CBX4-202ENST00000448310 HGH1Q9BTY7 390 aa27.46■■□□□ 1.99
CBX4-202ENST00000448310 XKR8Q9H6D3 395 aa27.46■■□□□ 1.99
CBX4-202ENST00000448310 PIH1D1Q9NWS0 290 aaKnown RBP27.46■■□□□ 1.99
CBX4-202ENST00000448310 FEZ2Q9UHY8 353 aaPredicted RBP27.46■■□□□ 1.99
CBX4-202ENST00000448310 TRBV5-4A0A0C4DH59 114 aa27.45■■□□□ 1.98
CBX4-202ENST00000448310 TMEM150CB9EJG8 249 aa27.45■■□□□ 1.98
CBX4-202ENST00000448310 MEN1O00255 615 aa27.45■■□□□ 1.98
CBX4-202ENST00000448310 IFRD1O00458 451 aaPredicted RBP27.45■■□□□ 1.98
CBX4-202ENST00000448310 IPO7O95373 1038 aaKnown RBP27.45■■□□□ 1.98
CBX4-202ENST00000448310 METTL18O95568 372 aa27.45■■□□□ 1.98
CBX4-202ENST00000448310 PVRP15151 417 aa27.45■■□□□ 1.98
CBX4-202ENST00000448310 LMAN1P49257 510 aa27.45■■□□□ 1.98
CBX4-202ENST00000448310 CCL11P51671 97 aa27.45■■□□□ 1.98
CBX4-202ENST00000448310 PRKG2Q13237 762 aa27.45■■□□□ 1.98
CBX4-202ENST00000448310 IZUMO3Q5VZ72 239 aa27.45■■□□□ 1.98
CBX4-202ENST00000448310 KCTD11Q693B1 232 aa27.45■■□□□ 1.98
CBX4-202ENST00000448310 DSELQ8IZU8 1212 aa27.45■■□□□ 1.98
CBX4-202ENST00000448310 TAB3Q8N5C8 712 aaPredicted RBP27.45■■□□□ 1.98
CBX4-202ENST00000448310 ENDOVQ8N8Q3 282 aaKnown RBP27.45■■□□□ 1.98
CBX4-202ENST00000448310 FAM71DQ8N9W8 422 aa27.45■■□□□ 1.98
CBX4-202ENST00000448310 CALR3Q96L12 384 aaKnown RBP27.45■■□□□ 1.98
CBX4-202ENST00000448310 C19orf43Q9BQ61 176 aa27.45■■□□□ 1.98
CBX4-202ENST00000448310 CLEC18AA5D8T8 446 aa27.44■■□□□ 1.98
CBX4-202ENST00000448310 BTNL10A8MVZ5 291 aa27.44■■□□□ 1.98
CBX4-202ENST00000448310 MATN2O00339 956 aa27.44■■□□□ 1.98
CBX4-202ENST00000448310 PTGIRP43119 386 aa27.44■■□□□ 1.98
CBX4-202ENST00000448310 GSDMDP57764 484 aa27.44■■□□□ 1.98
CBX4-202ENST00000448310 POU6F1Q14863 301 aa27.44■■□□□ 1.98
CBX4-202ENST00000448310 ZNF789Q5FWF6 425 aa27.44■■□□□ 1.98
CBX4-202ENST00000448310 CLEC18BQ6UXF7 455 aa27.44■■□□□ 1.98
CBX4-202ENST00000448310 TMTC1Q8IUR5 882 aa27.44■■□□□ 1.98
CBX4-202ENST00000448310 PIANPQ8IYJ0 282 aa27.44■■□□□ 1.98
CBX4-202ENST00000448310 CLEC18CQ8NCF0 446 aa27.44■■□□□ 1.98
CBX4-202ENST00000448310 LRRC45Q96CN5 670 aa27.44■■□□□ 1.98
CBX4-202ENST00000448310 LRFN5Q96NI6 719 aa27.44■■□□□ 1.98
CBX4-202ENST00000448310 SLC25A23Q9BV35 468 aa27.44■■□□□ 1.98
CBX4-202ENST00000448310 ING2Q9H160 280 aa27.44■■□□□ 1.98
CBX4-202ENST00000448310 VPS37BQ9H9H4 285 aa27.44■■□□□ 1.98
CBX4-202ENST00000448310 ACSS2Q9NR19 701 aa27.44■■□□□ 1.98
CBX4-202ENST00000448310 NLE1Q9NVX2 485 aaPredicted RBP27.44■■□□□ 1.98
CBX4-202ENST00000448310 PACSIN2Q9UNF0 486 aaPredicted RBP27.44■■□□□ 1.98
CBX4-202ENST00000448310 SNX7Q9UNH6 387 aa27.44■■□□□ 1.98
CBX4-202ENST00000448310 USP9XQ93008 2570 aaPredicted RBP27.44■■□□□ 1.98
CBX4-202ENST00000448310 FER1L5A0AVI2 2057 aa27.44■■□□□ 1.98
CBX4-202ENST00000448310 CCDC78A2IDD5 438 aa27.43■■□□□ 1.98
CBX4-202ENST00000448310 H7C0S8 307 aa27.43■■□□□ 1.98
CBX4-202ENST00000448310 RORAP35398 523 aa27.43■■□□□ 1.98
CBX4-202ENST00000448310 ZNF75DP51815 510 aa27.43■■□□□ 1.98
CBX4-202ENST00000448310 DBN1Q16643 649 aa27.43■■□□□ 1.98
CBX4-202ENST00000448310 PARP6Q2NL67 630 aa27.43■■□□□ 1.98
CBX4-202ENST00000448310 CDKN2AIPNLQ96HQ2 116 aa27.43■■□□□ 1.98
CBX4-202ENST00000448310 PITPNM3Q9BZ71 974 aa27.43■■□□□ 1.98
CBX4-202ENST00000448310 TFB2MQ9H5Q4 396 aaKnown RBP27.43■■□□□ 1.98
CBX4-202ENST00000448310 ACTR5Q9H9F9 607 aaPredicted RBP27.43■■□□□ 1.98
CBX4-202ENST00000448310 PCMTD2Q9NV79 361 aa27.43■■□□□ 1.98
CBX4-202ENST00000448310 RP1L1Q8IWN7 2480 aaPredicted RBP27.43■■□□□ 1.98
CBX4-202ENST00000448310 CCDC88CQ9P219 2028 aa27.43■■□□□ 1.98
CBX4-202ENST00000448310 SNRNP200O75643 2136 aaKnown RBP27.43■■□□□ 1.98
CBX4-202ENST00000448310 PTMAP06454 111 aaKnown RBP27.42■■□□□ 1.98
CBX4-202ENST00000448310 CYP2A7P20853 494 aa27.42■■□□□ 1.98
CBX4-202ENST00000448310 CD151P48509 253 aa27.42■■□□□ 1.98
CBX4-202ENST00000448310 CD97P48960 835 aa27.42■■□□□ 1.98
CBX4-202ENST00000448310 PGDP52209 483 aa27.42■■□□□ 1.98
CBX4-202ENST00000448310 GDF10P55107 478 aa27.42■■□□□ 1.98
CBX4-202ENST00000448310 PTCHD3Q3KNS1 767 aa27.42■■□□□ 1.98
CBX4-202ENST00000448310 ATCAYQ86WG3 371 aa27.42■■□□□ 1.98
CBX4-202ENST00000448310 AMIGO1Q86WK6 493 aa27.42■■□□□ 1.98
CBX4-202ENST00000448310 ADAMTS17Q8TE56 1095 aa27.42■■□□□ 1.98
CBX4-202ENST00000448310 TFGQ92734 400 aaPredicted RBP27.42■■□□□ 1.98
CBX4-202ENST00000448310 TRAPPC9Q96Q05 1148 aa27.42■■□□□ 1.98
CBX4-202ENST00000448310 MVB12BQ9H7P6 319 aa27.42■■□□□ 1.98
CBX4-202ENST00000448310 LRRC40Q9H9A6 602 aa27.42■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms