RNA–Protein interactions for RNA: ENST00000445866.6

SGCE-206, Transcript of sarcoglycan epsilon, humanhuman

TSL 5 BASIC

Gene SGCE, Length 1,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-206ENST00000445866 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.01■□□□□ 0.31
SGCE-206ENST00000445866 DCDC2Q9UHG0 476 aa17.01■□□□□ 0.31
SGCE-206ENST00000445866 PLXND1Q9Y4D7 1925 aa17.01■□□□□ 0.31
SGCE-206ENST00000445866 OR52A4PA6NMU1 304 aa17.01■□□□□ 0.31
SGCE-206ENST00000445866 LRP3O75074 770 aa17.01■□□□□ 0.31
SGCE-206ENST00000445866 F3P13726 295 aa17.01■□□□□ 0.31
SGCE-206ENST00000445866 ATP6V0D1P61421 351 aa17.01■□□□□ 0.31
SGCE-206ENST00000445866 SLC18A2Q05940 514 aa17.01■□□□□ 0.31
SGCE-206ENST00000445866 SUZ12Q15022 739 aaKnown RBP17.01■□□□□ 0.31
SGCE-206ENST00000445866 RPE65Q16518 533 aa17.01■□□□□ 0.31
SGCE-206ENST00000445866 CENPLQ8N0S6 344 aaPredicted RBP17.01■□□□□ 0.31
SGCE-206ENST00000445866 PKNOX2Q96KN3 472 aa17.01■□□□□ 0.31
SGCE-206ENST00000445866 RMDN2Q96LZ7 410 aa17.01■□□□□ 0.31
SGCE-206ENST00000445866 FERD3LQ96RJ6 166 aa17.01■□□□□ 0.31
SGCE-206ENST00000445866 IMP3Q9NV31 184 aaKnown RBP17.01■□□□□ 0.31
SGCE-206ENST00000445866 ASF1AQ9Y294 204 aa17.01■□□□□ 0.31
SGCE-206ENST00000445866 FRYLO94915 3013 aa17■□□□□ 0.31
SGCE-206ENST00000445866 KNL1Q8NG31 2342 aa17■□□□□ 0.31
SGCE-206ENST00000445866 THADAQ6YHU6 1953 aa17■□□□□ 0.31
SGCE-206ENST00000445866 A6NCN8 305 aa17■□□□□ 0.31
SGCE-206ENST00000445866 OR5K4A6NMS3 321 aa17■□□□□ 0.31
SGCE-206ENST00000445866 B4DGG1 531 aa17■□□□□ 0.31
SGCE-206ENST00000445866 PROB1E7EW31 1015 aa17■□□□□ 0.31
SGCE-206ENST00000445866 CDC7O00311 574 aa17■□□□□ 0.31
SGCE-206ENST00000445866 BTN3A1O00481 513 aa17■□□□□ 0.31
SGCE-206ENST00000445866 COPEO14579 308 aa17■□□□□ 0.31
SGCE-206ENST00000445866 ZBTB14O43829 449 aa17■□□□□ 0.31
SGCE-206ENST00000445866 SPAG7O75391 227 aa17■□□□□ 0.31
SGCE-206ENST00000445866 MATN4O95460 622 aa17■□□□□ 0.31
SGCE-206ENST00000445866 CD1DP15813 335 aa17■□□□□ 0.31
SGCE-206ENST00000445866 CREB1P16220 341 aa17■□□□□ 0.31
SGCE-206ENST00000445866 GLRBP48167 497 aa17■□□□□ 0.31
SGCE-206ENST00000445866 MAGOHP61326 146 aaKnown RBP17■□□□□ 0.31
SGCE-206ENST00000445866 AGBL2Q5U5Z8 902 aa17■□□□□ 0.31
SGCE-206ENST00000445866 KLC3Q6P597 504 aa17■□□□□ 0.31
SGCE-206ENST00000445866 SIRPGQ9P1W8 387 aa17■□□□□ 0.31
SGCE-206ENST00000445866 DOCK9Q9BZ29 2069 aa17■□□□□ 0.31
SGCE-206ENST00000445866 LRRK1Q38SD2 2015 aa16.99■□□□□ 0.31
SGCE-206ENST00000445866 EML5Q05BV3 1969 aa16.99■□□□□ 0.31
SGCE-206ENST00000445866 TOP3BO95985 862 aaKnown RBP16.99■□□□□ 0.31
SGCE-206ENST00000445866 ALPPL2P10696 532 aa16.99■□□□□ 0.31
SGCE-206ENST00000445866 SLC2A4P14672 509 aa16.99■□□□□ 0.31
SGCE-206ENST00000445866 TFEBP19484 476 aa16.99■□□□□ 0.31
SGCE-206ENST00000445866 CRHR1P34998 444 aa16.99■□□□□ 0.31
SGCE-206ENST00000445866 ACAP2Q15057 778 aa16.99■□□□□ 0.31
SGCE-206ENST00000445866 TTC23LQ6PF05 361 aa16.99■□□□□ 0.31
SGCE-206ENST00000445866 UBE2R2Q712K3 238 aaPredicted RBP16.99■□□□□ 0.31
SGCE-206ENST00000445866 KANSL1Q7Z3B3 1105 aa16.99■□□□□ 0.31
SGCE-206ENST00000445866 CLEC14AQ86T13 490 aa16.99■□□□□ 0.31
SGCE-206ENST00000445866 SFTPA2Q8IWL1 248 aa16.99■□□□□ 0.31
SGCE-206ENST00000445866 PATE1Q8WXA2 126 aa16.99■□□□□ 0.31
SGCE-206ENST00000445866 CXorf40BQ96DE9 158 aa16.99■□□□□ 0.31
SGCE-206ENST00000445866 SCYL1Q96KG9 808 aa16.99■□□□□ 0.31
SGCE-206ENST00000445866 ATP6V1G3Q96LB4 118 aa16.99■□□□□ 0.31
SGCE-206ENST00000445866 GPR78Q96P69 363 aa16.99■□□□□ 0.31
SGCE-206ENST00000445866 PHOX2BQ99453 314 aa16.99■□□□□ 0.31
SGCE-206ENST00000445866 PARD6AQ9NPB6 346 aa16.99■□□□□ 0.31
SGCE-206ENST00000445866 KCNK9Q9NPC2 374 aa16.99■□□□□ 0.31
SGCE-206ENST00000445866 HEBP2Q9Y5Z4 205 aa16.99■□□□□ 0.31
SGCE-206ENST00000445866 COLEC10Q9Y6Z7 277 aa16.99■□□□□ 0.31
SGCE-206ENST00000445866 WDR87Q6ZQQ6 2873 aa16.99■□□□□ 0.31
SGCE-206ENST00000445866 KIR2DS5A0A0G2JLQ3 304 aa16.98■□□□□ 0.31
SGCE-206ENST00000445866 A0A0G2JNG1 304 aa16.98■□□□□ 0.31
SGCE-206ENST00000445866 GFYI3L273 518 aa16.98■□□□□ 0.31
SGCE-206ENST00000445866 KIR2DS3K7RE56 304 aa16.98■□□□□ 0.31
SGCE-206ENST00000445866 PCDHGA12O60330 932 aa16.98■□□□□ 0.31
SGCE-206ENST00000445866 SYF2O95926 243 aaKnown RBP16.98■□□□□ 0.31
SGCE-206ENST00000445866 GSTA1P08263 222 aa16.98■□□□□ 0.31
SGCE-206ENST00000445866 MAP4P27816 1152 aaKnown RBP16.98■□□□□ 0.31
SGCE-206ENST00000445866 SLC19A1P41440 591 aa16.98■□□□□ 0.31
SGCE-206ENST00000445866 MAPK9P45984 424 aa16.98■□□□□ 0.31
SGCE-206ENST00000445866 NHLH1Q02575 133 aa16.98■□□□□ 0.31
SGCE-206ENST00000445866 PRKG2Q13237 762 aa16.98■□□□□ 0.31
SGCE-206ENST00000445866 KIR2DS5Q14953 304 aa16.98■□□□□ 0.31
SGCE-206ENST00000445866 TSNQ15631 228 aaKnown RBP16.98■□□□□ 0.31
SGCE-206ENST00000445866 TSNAXIP1Q2TAA8 658 aa16.98■□□□□ 0.31
SGCE-206ENST00000445866 C16orf46Q6P387 395 aa16.98■□□□□ 0.31
SGCE-206ENST00000445866 OGFOD3Q6PK18 319 aa16.98■□□□□ 0.31
SGCE-206ENST00000445866 ISCA2Q86U28 154 aa16.98■□□□□ 0.31
SGCE-206ENST00000445866 TRIM48Q8IWZ4 208 aa16.98■□□□□ 0.31
SGCE-206ENST00000445866 NAGSQ8N159 534 aa16.98■□□□□ 0.31
SGCE-206ENST00000445866 BANPQ8N9N5 519 aa16.98■□□□□ 0.31
SGCE-206ENST00000445866 MCOLN3Q8TDD5 553 aa16.98■□□□□ 0.31
SGCE-206ENST00000445866 KIAA1191Q96A73 305 aa16.98■□□□□ 0.31
SGCE-206ENST00000445866 ALKBH8Q96BT7 664 aaKnown RBP16.98■□□□□ 0.31
SGCE-206ENST00000445866 TLCD1Q96CP7 247 aa16.98■□□□□ 0.31
SGCE-206ENST00000445866 DUSP23Q9BVJ7 150 aa16.98■□□□□ 0.31
SGCE-206ENST00000445866 TFB2MQ9H5Q4 396 aaKnown RBP16.98■□□□□ 0.31
SGCE-206ENST00000445866 ALG9Q9H6U8 611 aa16.98■□□□□ 0.31
SGCE-206ENST00000445866 DNAAF2Q9NVR5 837 aaKnown RBP16.98■□□□□ 0.31
SGCE-206ENST00000445866 ZNF624Q9P2J8 865 aaPredicted RBP16.98■□□□□ 0.31
SGCE-206ENST00000445866 RAPGEFL1Q9UHV5 662 aa16.98■□□□□ 0.31
SGCE-206ENST00000445866 ADAMTS6Q9UKP5 1117 aa16.98■□□□□ 0.31
SGCE-206ENST00000445866 IKZF3Q9UKT9 509 aa16.98■□□□□ 0.31
SGCE-206ENST00000445866 GRID1Q9ULK0 1009 aa16.98■□□□□ 0.31
SGCE-206ENST00000445866 ACTL7BQ9Y614 415 aa16.98■□□□□ 0.31
SGCE-206ENST00000445866 SCN8AQ9UQD0 1980 aa16.98■□□□□ 0.31
SGCE-206ENST00000445866 PRAMEF33A0A0G2JMD5 474 aa16.97■□□□□ 0.31
SGCE-206ENST00000445866 NPEPPSL1A6NEC2 478 aa16.97■□□□□ 0.31
SGCE-206ENST00000445866 CDX4O14627 284 aaPredicted RBP16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms