RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-208ENST00000443046 PDK1Q15118 436 aa13.94□□□□□ -0.18
HMGN1-208ENST00000443046 NOMO1Q15155 1222 aa13.94□□□□□ -0.18
HMGN1-208ENST00000443046 STX1AQ16623 288 aa13.94□□□□□ -0.18
HMGN1-208ENST00000443046 LONRF2Q1L5Z9 754 aa13.94□□□□□ -0.18
HMGN1-208ENST00000443046 BCL7AQ4VC05 210 aa13.94□□□□□ -0.18
HMGN1-208ENST00000443046 FIGNQ5HY92 759 aa13.94□□□□□ -0.18
HMGN1-208ENST00000443046 RHBDD2Q6NTF9 364 aa13.94□□□□□ -0.18
HMGN1-208ENST00000443046 MRPL14Q6P1L8 145 aaKnown RBP13.94□□□□□ -0.18
HMGN1-208ENST00000443046 KDELC1Q6UW63 502 aa13.94□□□□□ -0.18
HMGN1-208ENST00000443046 B4GALNT4Q76KP1 1039 aa13.94□□□□□ -0.18
HMGN1-208ENST00000443046 VSIG1Q86XK7 387 aa13.94□□□□□ -0.18
HMGN1-208ENST00000443046 FAR1Q8WVX9 515 aa13.94□□□□□ -0.18
HMGN1-208ENST00000443046 TEKT5Q96M29 485 aa13.94□□□□□ -0.18
HMGN1-208ENST00000443046 NRTNQ99748 197 aa13.94□□□□□ -0.18
HMGN1-208ENST00000443046 SRMSQ9H3Y6 488 aa13.94□□□□□ -0.18
HMGN1-208ENST00000443046 TFB2MQ9H5Q4 396 aaKnown RBP13.94□□□□□ -0.18
HMGN1-208ENST00000443046 ATP13A2Q9NQ11 1180 aa13.94□□□□□ -0.18
HMGN1-208ENST00000443046 CHMP5Q9NZZ3 219 aa13.94□□□□□ -0.18
HMGN1-208ENST00000443046 NENFQ9UMX5 172 aa13.94□□□□□ -0.18
HMGN1-208ENST00000443046 NOVA2Q9UNW9 492 aaKnown RBP13.94□□□□□ -0.18
HMGN1-208ENST00000443046 PTRH2Q9Y3E5 179 aaKnown RBP13.94□□□□□ -0.18
HMGN1-208ENST00000443046 HEY1Q9Y5J3 304 aa13.94□□□□□ -0.18
HMGN1-208ENST00000443046 BZW2Q9Y6E2 419 aaKnown RBP13.94□□□□□ -0.18
HMGN1-208ENST00000443046 A0A087X0T9 212 aa13.93□□□□□ -0.18
HMGN1-208ENST00000443046 A0A0A6YYK5 440 aaPredicted RBP13.93□□□□□ -0.18
HMGN1-208ENST00000443046 A0A1W2PQJ5 194 aa13.93□□□□□ -0.18
HMGN1-208ENST00000443046 SLC35G4P0C7Q5 338 aa13.93□□□□□ -0.18
HMGN1-208ENST00000443046 FAM228BP0C875 321 aa13.93□□□□□ -0.18
HMGN1-208ENST00000443046 MSH3P20585 1137 aa13.93□□□□□ -0.18
HMGN1-208ENST00000443046 CD68P34810 354 aaPredicted RBP13.93□□□□□ -0.18
HMGN1-208ENST00000443046 FOLR3P41439 243 aa13.93□□□□□ -0.18
HMGN1-208ENST00000443046 PPP2R5EQ16537 467 aa13.93□□□□□ -0.18
HMGN1-208ENST00000443046 SIRPB2Q5JXA9 342 aa13.93□□□□□ -0.18
HMGN1-208ENST00000443046 ZFYVE27Q5T4F4 411 aa13.93□□□□□ -0.18
HMGN1-208ENST00000443046 MLIPQ5VWP3 458 aa13.93□□□□□ -0.18
HMGN1-208ENST00000443046 SASS6Q6UVJ0 657 aa13.93□□□□□ -0.18
HMGN1-208ENST00000443046 TMEM151BQ8IW70 566 aa13.93□□□□□ -0.18
HMGN1-208ENST00000443046 LILRA3Q8N6C8 439 aaPredicted RBP13.93□□□□□ -0.18
HMGN1-208ENST00000443046 GRHL3Q8TE85 626 aa13.93□□□□□ -0.18
HMGN1-208ENST00000443046 COG1Q8WTW3 980 aa13.93□□□□□ -0.18
HMGN1-208ENST00000443046 LCN9Q8WX39 176 aa13.93□□□□□ -0.18
HMGN1-208ENST00000443046 SYN2Q92777 582 aaPredicted RBP13.93□□□□□ -0.18
HMGN1-208ENST00000443046 NACC2Q96BF6 587 aa13.93□□□□□ -0.18
HMGN1-208ENST00000443046 PTERQ96BW5 349 aa13.93□□□□□ -0.18
HMGN1-208ENST00000443046 SLX1AQ9BQ83 275 aa13.93□□□□□ -0.18
HMGN1-208ENST00000443046 CCM2Q9BSQ5 444 aa13.93□□□□□ -0.18
HMGN1-208ENST00000443046 CHRNA10Q9GZZ6 450 aa13.93□□□□□ -0.18
HMGN1-208ENST00000443046 UBP1Q9NZI7 540 aa13.93□□□□□ -0.18
HMGN1-208ENST00000443046 HACD3Q9P035 362 aa13.93□□□□□ -0.18
HMGN1-208ENST00000443046 FAM153AQ9UHL3 310 aa13.93□□□□□ -0.18
HMGN1-208ENST00000443046 HEBP2Q9Y5Z4 205 aa13.93□□□□□ -0.18
HMGN1-208ENST00000443046 AP1M2Q9Y6Q5 423 aa13.93□□□□□ -0.18
HMGN1-208ENST00000443046 A0A1B0GTH6 734 aa13.92□□□□□ -0.18
HMGN1-208ENST00000443046 GSAPA4D1B5 854 aa13.92□□□□□ -0.18
HMGN1-208ENST00000443046 PRSS44E7EML9 344 aa13.92□□□□□ -0.18
HMGN1-208ENST00000443046 HCRTR1O43613 425 aa13.92□□□□□ -0.18
HMGN1-208ENST00000443046 PVRP15151 417 aa13.92□□□□□ -0.18
HMGN1-208ENST00000443046 PTPN3P26045 913 aa13.92□□□□□ -0.18
HMGN1-208ENST00000443046 WNT3AP56704 352 aa13.92□□□□□ -0.18
HMGN1-208ENST00000443046 FOXL2P58012 376 aa13.92□□□□□ -0.18
HMGN1-208ENST00000443046 AIMP2Q13155 320 aaKnown RBP13.92□□□□□ -0.18
HMGN1-208ENST00000443046 HIF1AQ16665 826 aa13.92□□□□□ -0.18
HMGN1-208ENST00000443046 ZNF658BQ4V348 819 aaPredicted RBP13.92□□□□□ -0.18
HMGN1-208ENST00000443046 NPNTQ6UXI9 565 aa13.92□□□□□ -0.18
HMGN1-208ENST00000443046 CLEC17AQ6ZS10 378 aa13.92□□□□□ -0.18
HMGN1-208ENST00000443046 DET1Q7L5Y6 550 aa13.92□□□□□ -0.18
HMGN1-208ENST00000443046 DAAM2Q86T65 1068 aa13.92□□□□□ -0.18
HMGN1-208ENST00000443046 CFAP206Q8IYR0 622 aa13.92□□□□□ -0.18
HMGN1-208ENST00000443046 ADGRF3Q8IZF5 1079 aa13.92□□□□□ -0.18
HMGN1-208ENST00000443046 PROKR1Q8TCW9 393 aa13.92□□□□□ -0.18
HMGN1-208ENST00000443046 ZNF398Q8TD17 642 aa13.92□□□□□ -0.18
HMGN1-208ENST00000443046 NAT14Q8WUY8 206 aa13.92□□□□□ -0.18
HMGN1-208ENST00000443046 RELTQ969Z4 430 aa13.92□□□□□ -0.18
HMGN1-208ENST00000443046 MRGPRX2Q96LB1 330 aa13.92□□□□□ -0.18
HMGN1-208ENST00000443046 NAP1L5Q96NT1 182 aaPredicted RBP13.92□□□□□ -0.18
HMGN1-208ENST00000443046 SLC7A5P2Q9GIP4 190 aa13.92□□□□□ -0.18
HMGN1-208ENST00000443046 FAM60AQ9NP50 221 aa13.92□□□□□ -0.18
HMGN1-208ENST00000443046 MED13LQ71F56 2210 aa13.92□□□□□ -0.18
HMGN1-208ENST00000443046 NIPBLQ6KC79 2804 aaeCLIP13.91□□□□□ -0.18
HMGN1-208ENST00000443046 A0A1B0GUH1 482 aa13.91□□□□□ -0.18
HMGN1-208ENST00000443046 AGAP14A8MT82 685 aa13.91□□□□□ -0.18
HMGN1-208ENST00000443046 AGPSO00116 658 aa13.91□□□□□ -0.18
HMGN1-208ENST00000443046 PPP1R12AO14974 1030 aaPredicted RBP13.91□□□□□ -0.18
HMGN1-208ENST00000443046 MAP3K7O43318 606 aa13.91□□□□□ -0.18
HMGN1-208ENST00000443046 BUD23O43709 281 aaKnown RBP13.91□□□□□ -0.18
HMGN1-208ENST00000443046 POLBP06746 335 aa13.91□□□□□ -0.18
HMGN1-208ENST00000443046 CHRNA4P43681 627 aa13.91□□□□□ -0.18
HMGN1-208ENST00000443046 DCDP81605 110 aaKnown RBP13.91□□□□□ -0.18
HMGN1-208ENST00000443046 ART3Q13508 389 aa13.91□□□□□ -0.18
HMGN1-208ENST00000443046 GSE1Q14687 1217 aa13.91□□□□□ -0.18
HMGN1-208ENST00000443046 PRKD1Q15139 912 aaPredicted RBP13.91□□□□□ -0.18
HMGN1-208ENST00000443046 SLC1A5Q15758 541 aa13.91□□□□□ -0.18
HMGN1-208ENST00000443046 ZIC1Q15915 447 aa13.91□□□□□ -0.18
HMGN1-208ENST00000443046 B3GNTL1Q67FW5 361 aaPredicted RBP13.91□□□□□ -0.18
HMGN1-208ENST00000443046 ALKBH5Q6P6C2 394 aaKnown RBP13.91□□□□□ -0.18
HMGN1-208ENST00000443046 GLT6D1Q7Z4J2 308 aa13.91□□□□□ -0.18
HMGN1-208ENST00000443046 GPR135Q8IZ08 494 aa13.91□□□□□ -0.18
HMGN1-208ENST00000443046 DNAJB14Q8TBM8 379 aa13.91□□□□□ -0.18
HMGN1-208ENST00000443046 AP1M1Q9BXS5 423 aa13.91□□□□□ -0.18
HMGN1-208ENST00000443046 SPRTNQ9H040 489 aaPredicted RBP13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms