RNA–Protein interactions for RNA: ENST00000442234.5

LIG4-203, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 3,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-203ENST00000442234 HSPA4LO95757 839 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 C9P02748 559 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 URODP06132 367 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 RB1P06400 928 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 GNAO1P09471 354 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 MBL2P11226 248 aaPredicted RBP2.74□□□□□ -1.97
LIG4-203ENST00000442234 RALBP11234 206 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 IFNAR1P17181 557 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 AOC1P19801 751 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 WARSP23381 471 aaKnown RBP2.74□□□□□ -1.97
LIG4-203ENST00000442234 AZGP1P25311 298 aaKnown RBP2.74□□□□□ -1.97
LIG4-203ENST00000442234 SREBF1P36956 1147 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 KCNC1P48547 511 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 ARSDP51689 593 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 SLC18A1P54219 525 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 CTBSQ01459 385 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 IFITM3Q01628 133 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 POU4F1Q01851 419 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 SEMG2Q02383 582 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 CREB5Q02930 508 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 SLC3A1Q07837 685 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 RGS1Q08116 209 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 MGAT3Q09327 533 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 ALKBH1Q13686 389 aaKnown RBP2.74□□□□□ -1.97
LIG4-203ENST00000442234 INPP5AQ14642 412 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 TRAM2Q15035 370 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 PRKD1Q15139 912 aaPredicted RBP2.74□□□□□ -1.97
LIG4-203ENST00000442234 LTB4RQ15722 352 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 KYAT1Q16773 422 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 SMTNL2Q2TAL5 461 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 IQCCQ4KMZ1 466 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 ATP13A5Q4VNC0 1218 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 GPAT3Q53EU6 434 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 SETMARQ53H47 684 aaPredicted RBP2.74□□□□□ -1.97
LIG4-203ENST00000442234 C4orf48Q5BLP8 95 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 PRAMEF14Q5SWL7 426 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 ZNF773Q6PK81 442 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 PLET1Q6UQ28 207 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 KDELC1Q6UW63 502 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 FAM92BQ6ZTR7 304 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 ASCL5Q7RTU5 278 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 P2RY8Q86VZ1 359 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 PPM1NQ8N819 430 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 PNPLA1Q8N8W4 532 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 NAT8LQ8N9F0 302 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 WDSUB1Q8N9V3 476 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 TTC29Q8NA56 475 aaPredicted RBP2.74□□□□□ -1.97
LIG4-203ENST00000442234 KDM1BQ8NB78 822 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 CLRN3Q8NCR9 226 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 FAM156AQ8NDB6 213 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 OR6C4Q8NGE1 309 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 ADAMTS14Q8WXS8 1223 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 BSNDQ8WZ55 320 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 DDX1Q92499 740 aaKnown RBP2.74□□□□□ -1.97
LIG4-203ENST00000442234 ALG3Q92685 438 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 USP7Q93009 1102 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 YIPF5Q969M3 257 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 RAB7BQ96AH8 199 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 S100PBPQ96BU1 408 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 FBXL20Q96IG2 436 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 SPACA7Q96KW9 195 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 GAD1Q99259 594 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 ZBTB18Q99592 522 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 VRK1Q99986 396 aaPredicted RBP2.74□□□□□ -1.97
LIG4-203ENST00000442234 WDR77Q9BQA1 342 aaPredicted RBP2.74□□□□□ -1.97
LIG4-203ENST00000442234 ZSWIM1Q9BR11 485 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 PELOQ9BRX2 385 aaKnown RBP2.74□□□□□ -1.97
LIG4-203ENST00000442234 GPN2Q9H9Y4 310 aaPredicted RBP2.74□□□□□ -1.97
LIG4-203ENST00000442234 WDR41Q9HAD4 459 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 AKIP1Q9NQ31 210 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 ARHGEF4Q9NR80 690 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 SMYD2Q9NRG4 433 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 NPAP1Q9NZP6 1156 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 TINAGQ9UJW2 476 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 ING4Q9UNL4 249 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 PRKAB1Q9Y478 270 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 PCDHB7Q9Y5E2 793 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 PCDHGB7Q9Y5F8 929 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 CHD7Q9P2D1 2997 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 ZNF609O15014 1411 aa2.74□□□□□ -1.97
LIG4-203ENST00000442234 SEC16AO15027 2179 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 DDX60Q8IY21 1712 aaKnown RBP2.73□□□□□ -1.97
LIG4-203ENST00000442234 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.73□□□□□ -1.97
LIG4-203ENST00000442234 TAF1P21675 1872 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 A0A0A6YYK5 440 aaPredicted RBP2.73□□□□□ -1.97
LIG4-203ENST00000442234 A0A0B4J269 797 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 A0A0G2JMP0 313 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 MEIOCA2RUB1 952 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 BTNL10A8MVZ5 291 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 ZNF879B4DU55 563 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 M0R296 226 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 TBX3O15119 743 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 TBC1D4O60343 1298 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 CYP7B1O75881 506 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 CCNB2O95067 398 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 ABHD2P08910 425 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 HK1P19367 917 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 FASP25445 335 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 YWHABP31946 246 aaKnown RBP2.73□□□□□ -1.97
LIG4-203ENST00000442234 GRK3P35626 688 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms