RNA–Protein interactions for RNA: ENST00000441602.5

VPS50-205, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-205ENST00000441602 CTHP32929 405 aa5.9□□□□□ -1.46
VPS50-205ENST00000441602 AGTR2P50052 363 aa5.9□□□□□ -1.46
VPS50-205ENST00000441602 ERVK-8P63133 956 aa5.9□□□□□ -1.46
VPS50-205ENST00000441602 RPS21P63220 83 aaKnown RBP5.9□□□□□ -1.46
VPS50-205ENST00000441602 PHEXP78562 749 aa5.9□□□□□ -1.46
VPS50-205ENST00000441602 B4GALNT1Q00973 533 aa5.9□□□□□ -1.46
VPS50-205ENST00000441602 TBL3Q12788 808 aaKnown RBP5.9□□□□□ -1.46
VPS50-205ENST00000441602 SMAD4Q13485 552 aaKnown RBP5.9□□□□□ -1.46
VPS50-205ENST00000441602 ENPP2Q13822 863 aa5.9□□□□□ -1.46
VPS50-205ENST00000441602 PPP1R3AQ16821 1122 aa5.9□□□□□ -1.46
VPS50-205ENST00000441602 IL27RAQ6UWB1 636 aa5.9□□□□□ -1.46
VPS50-205ENST00000441602 RNF165Q6ZSG1 346 aa5.9□□□□□ -1.46
VPS50-205ENST00000441602 LPCAT2Q7L5N7 544 aa5.9□□□□□ -1.46
VPS50-205ENST00000441602 LRRTM4Q86VH4 590 aa5.9□□□□□ -1.46
VPS50-205ENST00000441602 PGAM4Q8N0Y7 254 aa5.9□□□□□ -1.46
VPS50-205ENST00000441602 RASGEF1AQ8N9B8 481 aa5.9□□□□□ -1.46
VPS50-205ENST00000441602 PPFIBP2Q8ND30 876 aa5.9□□□□□ -1.46
VPS50-205ENST00000441602 REPS1Q96D71 796 aa5.9□□□□□ -1.46
VPS50-205ENST00000441602 CHFRQ96EP1 664 aa5.9□□□□□ -1.46
VPS50-205ENST00000441602 NTMT1Q9BV86 223 aa5.9□□□□□ -1.46
VPS50-205ENST00000441602 OR2AG1Q9H205 316 aa5.9□□□□□ -1.46
VPS50-205ENST00000441602 ELOVL6Q9H5J4 265 aa5.9□□□□□ -1.46
VPS50-205ENST00000441602 DCLRE1BQ9H816 532 aa5.9□□□□□ -1.46
VPS50-205ENST00000441602 AKTIPQ9H8T0 292 aa5.9□□□□□ -1.46
VPS50-205ENST00000441602 ITM2CQ9NQX7 267 aa5.9□□□□□ -1.46
VPS50-205ENST00000441602 STOML1Q9UBI4 398 aa5.9□□□□□ -1.46
VPS50-205ENST00000441602 MAPRE3Q9UPY8 281 aa5.9□□□□□ -1.46
VPS50-205ENST00000441602 PDE10AQ9Y233 779 aa5.9□□□□□ -1.46
VPS50-205ENST00000441602 BTRCQ9Y297 605 aa5.9□□□□□ -1.46
VPS50-205ENST00000441602 C15orf38-AP3S2A0A0A6YYH1 394 aa5.9□□□□□ -1.47
VPS50-205ENST00000441602 A0A1W2PPC1 479 aa5.9□□□□□ -1.47
VPS50-205ENST00000441602 MGAT4DA6NG13 374 aa5.9□□□□□ -1.47
VPS50-205ENST00000441602 ULK1O75385 1050 aa5.9□□□□□ -1.47
VPS50-205ENST00000441602 MTX2O75431 263 aa5.9□□□□□ -1.47
VPS50-205ENST00000441602 MYO1DO94832 1006 aa5.9□□□□□ -1.47
VPS50-205ENST00000441602 CAPN1P07384 714 aa5.9□□□□□ -1.47
VPS50-205ENST00000441602 LINC00032P0C843 101 aa5.9□□□□□ -1.47
VPS50-205ENST00000441602 HSD17B2P37059 387 aa5.9□□□□□ -1.47
VPS50-205ENST00000441602 SEC13P55735 322 aa5.9□□□□□ -1.47
VPS50-205ENST00000441602 ABRQ12979 859 aa5.9□□□□□ -1.47
VPS50-205ENST00000441602 PDCD4Q53EL6 469 aaKnown RBP5.9□□□□□ -1.47
VPS50-205ENST00000441602 C10orf62Q5T681 223 aaPredicted RBP5.9□□□□□ -1.47
VPS50-205ENST00000441602 NEK5Q6P3R8 708 aa5.9□□□□□ -1.47
VPS50-205ENST00000441602 UNC5DQ6UXZ4 953 aa5.9□□□□□ -1.47
VPS50-205ENST00000441602 HACD2Q6Y1H2 254 aa5.9□□□□□ -1.47
VPS50-205ENST00000441602 LARP4Q71RC2 724 aaKnown RBP eCLIP5.9□□□□□ -1.47
VPS50-205ENST00000441602 RPS27LQ71UM5 84 aaKnown RBP5.9□□□□□ -1.47
VPS50-205ENST00000441602 ARPINQ7Z6K5 226 aa5.9□□□□□ -1.47
VPS50-205ENST00000441602 ULK2Q8IYT8 1036 aa5.9□□□□□ -1.47
VPS50-205ENST00000441602 DEFB107AQ8IZN7 70 aa5.9□□□□□ -1.47
VPS50-205ENST00000441602 PELI3Q8N2H9 469 aa5.9□□□□□ -1.47
VPS50-205ENST00000441602 FBXO15Q8NCQ5 510 aaPredicted RBP5.9□□□□□ -1.47
VPS50-205ENST00000441602 OR4F6Q8NGB9 312 aa5.9□□□□□ -1.47
VPS50-205ENST00000441602 FGF14Q92915 247 aa5.9□□□□□ -1.47
VPS50-205ENST00000441602 RCN3Q96D15 328 aa5.9□□□□□ -1.47
VPS50-205ENST00000441602 TRIM15Q9C019 465 aa5.9□□□□□ -1.47
VPS50-205ENST00000441602 ZNF385DQ9H6B1 395 aa5.9□□□□□ -1.47
VPS50-205ENST00000441602 RMI1Q9H9A7 625 aa5.9□□□□□ -1.47
VPS50-205ENST00000441602 PREBQ9HCU5 417 aa5.9□□□□□ -1.47
VPS50-205ENST00000441602 NMRK1Q9NWW6 199 aa5.9□□□□□ -1.47
VPS50-205ENST00000441602 NOP53Q9NZM5 478 aaKnown RBP5.9□□□□□ -1.47
VPS50-205ENST00000441602 ZIM2Q9NZV7 527 aa5.9□□□□□ -1.47
VPS50-205ENST00000441602 FAM8A1Q9UBU6 413 aa5.9□□□□□ -1.47
VPS50-205ENST00000441602 KLQ9UEF7 1012 aa5.9□□□□□ -1.47
VPS50-205ENST00000441602 DNAJC15Q9Y5T4 150 aa5.9□□□□□ -1.47
VPS50-205ENST00000441602 PIAS3Q9Y6X2 628 aa5.9□□□□□ -1.47
VPS50-205ENST00000441602 DOCK6Q96HP0 2047 aa5.9□□□□□ -1.47
VPS50-205ENST00000441602 MYOFQ9NZM1 2061 aa5.9□□□□□ -1.47
VPS50-205ENST00000441602 OTOL1A6NHN0 477 aaPredicted RBP5.89□□□□□ -1.47
VPS50-205ENST00000441602 MEI4A8MW99 385 aa5.89□□□□□ -1.47
VPS50-205ENST00000441602 GFYI3L273 518 aa5.89□□□□□ -1.47
VPS50-205ENST00000441602 UBFD1O14562 309 aaKnown RBP5.89□□□□□ -1.47
VPS50-205ENST00000441602 KMOO15229 486 aa5.89□□□□□ -1.47
VPS50-205ENST00000441602 UGDHO60701 494 aa5.89□□□□□ -1.47
VPS50-205ENST00000441602 POP7O75817 140 aaKnown RBP5.89□□□□□ -1.47
VPS50-205ENST00000441602 KLF8O95600 359 aaPredicted RBP5.89□□□□□ -1.47
VPS50-205ENST00000441602 PCCBP05166 539 aa5.89□□□□□ -1.47
VPS50-205ENST00000441602 POU3F3P20264 500 aaPredicted RBP5.89□□□□□ -1.47
VPS50-205ENST00000441602 KELP23276 732 aa5.89□□□□□ -1.47
VPS50-205ENST00000441602 GGT5P36269 586 aa5.89□□□□□ -1.47
VPS50-205ENST00000441602 HALP42357 657 aa5.89□□□□□ -1.47
VPS50-205ENST00000441602 MRPL19P49406 292 aaKnown RBP5.89□□□□□ -1.47
VPS50-205ENST00000441602 RPS14P62263 151 aaKnown RBP5.89□□□□□ -1.47
VPS50-205ENST00000441602 AP2B1P63010 937 aa5.89□□□□□ -1.47
VPS50-205ENST00000441602 HIST2H2ACQ16777 129 aaPredicted RBP5.89□□□□□ -1.47
VPS50-205ENST00000441602 PHKG1Q16816 387 aa5.89□□□□□ -1.47
VPS50-205ENST00000441602 GGTA1PQ4G0N0 100 aa5.89□□□□□ -1.47
VPS50-205ENST00000441602 COQ5Q5HYK3 327 aa5.89□□□□□ -1.47
VPS50-205ENST00000441602 PIP5KL1Q5T9C9 394 aa5.89□□□□□ -1.47
VPS50-205ENST00000441602 HIST2H2AA3Q6FI13 130 aa5.89□□□□□ -1.47
VPS50-205ENST00000441602 SLC22A15Q8IZD6 547 aa5.89□□□□□ -1.47
VPS50-205ENST00000441602 FNDC5Q8NAU1 212 aa5.89□□□□□ -1.47
VPS50-205ENST00000441602 ROPN1LQ96C74 230 aa5.89□□□□□ -1.47
VPS50-205ENST00000441602 MOCOSQ96EN8 888 aa5.89□□□□□ -1.47
VPS50-205ENST00000441602 MSLNLQ96KJ4 702 aa5.89□□□□□ -1.47
VPS50-205ENST00000441602 LINC00615Q96LM1 132 aaPredicted RBP5.89□□□□□ -1.47
VPS50-205ENST00000441602 VCX3BQ9H321 246 aa5.89□□□□□ -1.47
VPS50-205ENST00000441602 WDR26Q9H7D7 661 aa5.89□□□□□ -1.47
VPS50-205ENST00000441602 WDR41Q9HAD4 459 aa5.89□□□□□ -1.47
VPS50-205ENST00000441602 FBXL12Q9NXK8 326 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms