RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 KCNK7Q9Y2U2 307 aa2.73□□□□□ -1.97
HMGB1P18-201ENST00000438801 OR2W1Q9Y3N9 320 aa2.73□□□□□ -1.97
HMGB1P18-201ENST00000438801 MIA3Q5JRA6 1907 aa2.73□□□□□ -1.97
HMGB1P18-201ENST00000438801 SPAG17Q6Q759 2223 aa2.73□□□□□ -1.97
HMGB1P18-201ENST00000438801 KIF26AQ9ULI4 1882 aaPredicted RBP2.73□□□□□ -1.97
HMGB1P18-201ENST00000438801 PATJQ8NI35 1801 aa2.72□□□□□ -1.97
HMGB1P18-201ENST00000438801 PCNX2A6NKB5 2137 aa2.72□□□□□ -1.97
HMGB1P18-201ENST00000438801 UBE4BO95155 1302 aa2.72□□□□□ -1.97
HMGB1P18-201ENST00000438801 KIF16BQ96L93 1317 aa2.72□□□□□ -1.97
HMGB1P18-201ENST00000438801 MAP1AP78559 2803 aaPredicted RBP2.72□□□□□ -1.97
HMGB1P18-201ENST00000438801 TMEM202A6NGA9 273 aa2.72□□□□□ -1.97
HMGB1P18-201ENST00000438801 BLOC1S5-TXNDC5H3BN57 136 aa2.72□□□□□ -1.97
HMGB1P18-201ENST00000438801 MAOAP21397 527 aa2.72□□□□□ -1.97
HMGB1P18-201ENST00000438801 MMP14P50281 582 aa2.72□□□□□ -1.97
HMGB1P18-201ENST00000438801 METAP2P50579 478 aaKnown RBP eCLIP2.72□□□□□ -1.97
HMGB1P18-201ENST00000438801 ISL1P61371 349 aa2.72□□□□□ -1.97
HMGB1P18-201ENST00000438801 GTF2H2Q13888 395 aa2.72□□□□□ -1.97
HMGB1P18-201ENST00000438801 SIM2Q14190 667 aaPredicted RBP2.72□□□□□ -1.97
HMGB1P18-201ENST00000438801 TCTN1Q2MV58 587 aa2.72□□□□□ -1.97
HMGB1P18-201ENST00000438801 SLC45A4Q5BKX6 768 aa2.72□□□□□ -1.97
HMGB1P18-201ENST00000438801 SIRPB2Q5JXA9 342 aa2.72□□□□□ -1.97
HMGB1P18-201ENST00000438801 ANO1Q5XXA6 986 aa2.72□□□□□ -1.97
HMGB1P18-201ENST00000438801 GTF2H2CQ6P1K8 395 aa2.72□□□□□ -1.97
HMGB1P18-201ENST00000438801 SLC27A1Q6PCB7 646 aa2.72□□□□□ -1.97
HMGB1P18-201ENST00000438801 TSSK4Q6SA08 328 aa2.72□□□□□ -1.97
HMGB1P18-201ENST00000438801 ASB18Q6ZVZ8 466 aa2.72□□□□□ -1.97
HMGB1P18-201ENST00000438801 ADGRG6Q86SQ4 1221 aa2.72□□□□□ -1.97
HMGB1P18-201ENST00000438801 PHC2Q8IXK0 858 aa2.72□□□□□ -1.97
HMGB1P18-201ENST00000438801 SLC35F3Q8IY50 421 aa2.72□□□□□ -1.97
HMGB1P18-201ENST00000438801 ZCCHC9Q8N567 271 aaKnown RBP2.72□□□□□ -1.97
HMGB1P18-201ENST00000438801 SRBD1Q8N5C6 995 aaKnown RBP2.72□□□□□ -1.97
HMGB1P18-201ENST00000438801 MYCT1Q8N699 235 aa2.72□□□□□ -1.97
HMGB1P18-201ENST00000438801 PHOSPHO2Q8TCD6 241 aa2.72□□□□□ -1.97
HMGB1P18-201ENST00000438801 RUFY2Q8WXA3 655 aa2.72□□□□□ -1.97
HMGB1P18-201ENST00000438801 COG8Q96MW5 612 aa2.72□□□□□ -1.97
HMGB1P18-201ENST00000438801 BBS4Q96RK4 519 aa2.72□□□□□ -1.97
HMGB1P18-201ENST00000438801 MTERF1Q99551 399 aaKnown RBP2.72□□□□□ -1.97
HMGB1P18-201ENST00000438801 CMKLR1Q99788 373 aa2.72□□□□□ -1.97
HMGB1P18-201ENST00000438801 SH3GL2Q99962 352 aa2.72□□□□□ -1.97
HMGB1P18-201ENST00000438801 PLA2G2FQ9BZM2 168 aa2.72□□□□□ -1.97
HMGB1P18-201ENST00000438801 TBC1D17Q9HA65 648 aa2.72□□□□□ -1.97
HMGB1P18-201ENST00000438801 TMEM160Q9NX00 188 aa2.72□□□□□ -1.97
HMGB1P18-201ENST00000438801 ZKSCAN7Q9P0L1 754 aaPredicted RBP2.72□□□□□ -1.97
HMGB1P18-201ENST00000438801 FBXO9Q9UK97 447 aaPredicted RBP2.72□□□□□ -1.97
HMGB1P18-201ENST00000438801 DLGAP4Q9Y2H0 992 aa2.72□□□□□ -1.97
HMGB1P18-201ENST00000438801 FAM96BQ9Y3D0 163 aa2.72□□□□□ -1.97
HMGB1P18-201ENST00000438801 ATP6V0A2Q9Y487 856 aa2.72□□□□□ -1.97
HMGB1P18-201ENST00000438801 LOXL2Q9Y4K0 774 aa2.72□□□□□ -1.97
HMGB1P18-201ENST00000438801 LRP4O75096 1905 aa2.72□□□□□ -1.97
HMGB1P18-201ENST00000438801 ATG2AQ2TAZ0 1938 aa2.72□□□□□ -1.97
HMGB1P18-201ENST00000438801 VPS13CQ709C8 3753 aa2.72□□□□□ -1.97
HMGB1P18-201ENST00000438801 PHLPP2Q6ZVD8 1323 aa2.71□□□□□ -1.98
HMGB1P18-201ENST00000438801 TP53BP1Q12888 1972 aaPredicted RBP2.71□□□□□ -1.98
HMGB1P18-201ENST00000438801 RRP8O43159 456 aaKnown RBP2.71□□□□□ -1.98
HMGB1P18-201ENST00000438801 TSPAN3O60637 253 aa2.71□□□□□ -1.98
HMGB1P18-201ENST00000438801 CSPG5O95196 566 aa2.71□□□□□ -1.98
HMGB1P18-201ENST00000438801 MT-CYBP00156 380 aaPredicted RBP2.71□□□□□ -1.98
HMGB1P18-201ENST00000438801 HEXAP06865 529 aa2.71□□□□□ -1.98
HMGB1P18-201ENST00000438801 CD99P14209 185 aa2.71□□□□□ -1.98
HMGB1P18-201ENST00000438801 NR1D1P20393 614 aa2.71□□□□□ -1.98
HMGB1P18-201ENST00000438801 POU1F1P28069 291 aa2.71□□□□□ -1.98
HMGB1P18-201ENST00000438801 BDKRB2P30411 391 aa2.71□□□□□ -1.98
HMGB1P18-201ENST00000438801 KRT2P35908 639 aa2.71□□□□□ -1.98
HMGB1P18-201ENST00000438801 CCL23P55773 120 aa2.71□□□□□ -1.98
HMGB1P18-201ENST00000438801 GAGE5Q13069 117 aa2.71□□□□□ -1.98
HMGB1P18-201ENST00000438801 GAGE6Q13070 117 aa2.71□□□□□ -1.98
HMGB1P18-201ENST00000438801 PPIL2Q13356 520 aa2.71□□□□□ -1.98
HMGB1P18-201ENST00000438801 CCL14Q16627 93 aa2.71□□□□□ -1.98
HMGB1P18-201ENST00000438801 CCDC96Q2M329 555 aa2.71□□□□□ -1.98
HMGB1P18-201ENST00000438801 C2orf68Q2NKX9 166 aa2.71□□□□□ -1.98
HMGB1P18-201ENST00000438801 SFMBT2Q5VUG0 894 aa2.71□□□□□ -1.98
HMGB1P18-201ENST00000438801 METTL2BQ6P1Q9 378 aaKnown RBP2.71□□□□□ -1.98
HMGB1P18-201ENST00000438801 BHLHB9Q6PI77 547 aa2.71□□□□□ -1.98
HMGB1P18-201ENST00000438801 CPLX2Q6PUV4 134 aaKnown RBP2.71□□□□□ -1.98
HMGB1P18-201ENST00000438801 ERO1BQ86YB8 467 aa2.71□□□□□ -1.98
HMGB1P18-201ENST00000438801 TMTC1Q8IUR5 882 aa2.71□□□□□ -1.98
HMGB1P18-201ENST00000438801 DHX40Q8IX18 779 aaKnown RBP2.71□□□□□ -1.98
HMGB1P18-201ENST00000438801 SPICE1Q8N0Z3 855 aa2.71□□□□□ -1.98
HMGB1P18-201ENST00000438801 SPATA6LQ8N4H0 392 aa2.71□□□□□ -1.98
HMGB1P18-201ENST00000438801 ZBTB2Q8N680 514 aa2.71□□□□□ -1.98
HMGB1P18-201ENST00000438801 TNIP2Q8NFZ5 429 aa2.71□□□□□ -1.98
HMGB1P18-201ENST00000438801 METTL2AQ96IZ6 378 aaKnown RBP2.71□□□□□ -1.98
HMGB1P18-201ENST00000438801 ST6GAL2Q96JF0 529 aa2.71□□□□□ -1.98
HMGB1P18-201ENST00000438801 ZNF354BQ96LW1 612 aa2.71□□□□□ -1.98
HMGB1P18-201ENST00000438801 ZNF599Q96NL3 588 aa2.71□□□□□ -1.98
HMGB1P18-201ENST00000438801 EDEM2Q9BV94 578 aa2.71□□□□□ -1.98
HMGB1P18-201ENST00000438801 NDST4Q9H3R1 872 aa2.71□□□□□ -1.98
HMGB1P18-201ENST00000438801 UPF2Q9HAU5 1272 aaKnown RBP2.71□□□□□ -1.98
HMGB1P18-201ENST00000438801 BPIFA1Q9NP55 256 aa2.71□□□□□ -1.98
HMGB1P18-201ENST00000438801 MMP25Q9NPA2 562 aa2.71□□□□□ -1.98
HMGB1P18-201ENST00000438801 GPR108Q9NPR9 543 aa2.71□□□□□ -1.98
HMGB1P18-201ENST00000438801 DLGAP2Q9P1A6 1054 aa2.71□□□□□ -1.98
HMGB1P18-201ENST00000438801 TTC7AQ9ULT0 858 aaPredicted RBP2.71□□□□□ -1.98
HMGB1P18-201ENST00000438801 LSM4Q9Y4Z0 139 aaKnown RBP2.71□□□□□ -1.98
HMGB1P18-201ENST00000438801 SCN10AQ9Y5Y9 1956 aa2.7□□□□□ -1.98
HMGB1P18-201ENST00000438801 GOLGA4Q13439 2230 aaKnown RBP2.7□□□□□ -1.98
HMGB1P18-201ENST00000438801 MYOM3Q5VTT5 1437 aa2.7□□□□□ -1.98
HMGB1P18-201ENST00000438801 hCG_1642624A0A1W2PR95 340 aa2.7□□□□□ -1.98
HMGB1P18-201ENST00000438801 SMIM1B2RUZ4 78 aa2.7□□□□□ -1.98
HMGB1P18-201ENST00000438801 BAG4O95429 457 aaKnown RBP2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms