RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 SEMA5BQ9P283 1151 aa24.08■■□□□ 1.45
RAPGEF1-206ENST00000438647 ASIC3Q9UHC3 531 aa24.08■■□□□ 1.45
RAPGEF1-206ENST00000438647 PCYOX1Q9UHG3 505 aa24.08■■□□□ 1.45
RAPGEF1-206ENST00000438647 GNPTGQ9UJJ9 305 aa24.08■■□□□ 1.45
RAPGEF1-206ENST00000438647 TEX51A0A1B0GUA7 166 aa24.07■■□□□ 1.44
RAPGEF1-206ENST00000438647 OR6C74A6NCV1 312 aa24.07■■□□□ 1.44
RAPGEF1-206ENST00000438647 GOLGA8MH3BSY2 632 aa24.07■■□□□ 1.44
RAPGEF1-206ENST00000438647 KIF1CO43896 1103 aaKnown RBP24.07■■□□□ 1.44
RAPGEF1-206ENST00000438647 FOXM1Q08050 763 aa24.07■■□□□ 1.44
RAPGEF1-206ENST00000438647 PTRHD1Q6GMV3 140 aaKnown RBP24.07■■□□□ 1.44
RAPGEF1-206ENST00000438647 CES3Q6UWW8 571 aa24.07■■□□□ 1.44
RAPGEF1-206ENST00000438647 KMT5CQ86Y97 462 aa24.07■■□□□ 1.44
RAPGEF1-206ENST00000438647 CARFQ8N187 725 aa24.07■■□□□ 1.44
RAPGEF1-206ENST00000438647 NAT8LQ8N9F0 302 aa24.07■■□□□ 1.44
RAPGEF1-206ENST00000438647 OR4E2Q8NGC2 313 aa24.07■■□□□ 1.44
RAPGEF1-206ENST00000438647 ASZ1Q8WWH4 475 aa24.07■■□□□ 1.44
RAPGEF1-206ENST00000438647 PANX3Q96QZ0 392 aa24.07■■□□□ 1.44
RAPGEF1-206ENST00000438647 CTRCQ99895 268 aa24.07■■□□□ 1.44
RAPGEF1-206ENST00000438647 SRMSQ9H3Y6 488 aa24.07■■□□□ 1.44
RAPGEF1-206ENST00000438647 TFB2MQ9H5Q4 396 aaKnown RBP24.07■■□□□ 1.44
RAPGEF1-206ENST00000438647 RALYQ9UKM9 306 aaKnown RBP24.07■■□□□ 1.44
RAPGEF1-206ENST00000438647 ASF1AQ9Y294 204 aa24.07■■□□□ 1.44
RAPGEF1-206ENST00000438647 FAM237BA0A1B0GVD1 139 aa24.06■■□□□ 1.44
RAPGEF1-206ENST00000438647 UBA6A0AVT1 1052 aaPredicted RBP24.06■■□□□ 1.44
RAPGEF1-206ENST00000438647 NELFEP18615 380 aaKnown RBP24.06■■□□□ 1.44
RAPGEF1-206ENST00000438647 ARNTP27540 789 aa24.06■■□□□ 1.44
RAPGEF1-206ENST00000438647 PAFAH1B1P43034 410 aa24.06■■□□□ 1.44
RAPGEF1-206ENST00000438647 ARL4DP49703 201 aa24.06■■□□□ 1.44
RAPGEF1-206ENST00000438647 PPP1CAP62136 330 aa24.06■■□□□ 1.44
RAPGEF1-206ENST00000438647 IL11RAQ14626 422 aa24.06■■□□□ 1.44
RAPGEF1-206ENST00000438647 PCGF5Q86SE9 256 aa24.06■■□□□ 1.44
RAPGEF1-206ENST00000438647 CREG2Q8IUH2 290 aa24.06■■□□□ 1.44
RAPGEF1-206ENST00000438647 SNRNP27Q8WVK2 155 aaKnown RBP24.06■■□□□ 1.44
RAPGEF1-206ENST00000438647 TCF12Q99081 682 aa24.06■■□□□ 1.44
RAPGEF1-206ENST00000438647 HGH1Q9BTY7 390 aa24.06■■□□□ 1.44
RAPGEF1-206ENST00000438647 TRIT1Q9H3H1 467 aaKnown RBP24.06■■□□□ 1.44
RAPGEF1-206ENST00000438647 RNF14Q9UBS8 474 aa24.06■■□□□ 1.44
RAPGEF1-206ENST00000438647 POLG2Q9UHN1 485 aa24.06■■□□□ 1.44
RAPGEF1-206ENST00000438647 K7ENP7 123 aa24.05■■□□□ 1.44
RAPGEF1-206ENST00000438647 KDM1AO60341 852 aa24.05■■□□□ 1.44
RAPGEF1-206ENST00000438647 APOA4P06727 396 aa24.05■■□□□ 1.44
RAPGEF1-206ENST00000438647 ITGB6P18564 788 aa24.05■■□□□ 1.44
RAPGEF1-206ENST00000438647 RPS3P23396 243 aaKnown RBP eCLIP24.05■■□□□ 1.44
RAPGEF1-206ENST00000438647 ACADLP28330 430 aa24.05■■□□□ 1.44
RAPGEF1-206ENST00000438647 HSPA14Q0VDF9 509 aa24.05■■□□□ 1.44
RAPGEF1-206ENST00000438647 PTK6Q13882 451 aa24.05■■□□□ 1.44
RAPGEF1-206ENST00000438647 TMED2Q15363 201 aa24.05■■□□□ 1.44
RAPGEF1-206ENST00000438647 ARHGAP40Q5TG30 622 aa24.05■■□□□ 1.44
RAPGEF1-206ENST00000438647 INO80CQ6PI98 192 aaPredicted RBP24.05■■□□□ 1.44
RAPGEF1-206ENST00000438647 TBC1D21Q8IYX1 336 aa24.05■■□□□ 1.44
RAPGEF1-206ENST00000438647 PHC3Q8NDX5 983 aa24.05■■□□□ 1.44
RAPGEF1-206ENST00000438647 OR52E1Q8NGJ3 308 aa24.05■■□□□ 1.44
RAPGEF1-206ENST00000438647 SLC41A2Q96JW4 573 aa24.05■■□□□ 1.44
RAPGEF1-206ENST00000438647 OR6C1Q96RD1 312 aa24.05■■□□□ 1.44
RAPGEF1-206ENST00000438647 MAP3K3Q99759 626 aa24.05■■□□□ 1.44
RAPGEF1-206ENST00000438647 P2RY12Q9H244 342 aa24.05■■□□□ 1.44
RAPGEF1-206ENST00000438647 APMAPQ9HDC9 416 aa24.05■■□□□ 1.44
RAPGEF1-206ENST00000438647 VPS9D1Q9Y2B5 631 aa24.05■■□□□ 1.44
RAPGEF1-206ENST00000438647 LOC400499M0QZD8 3231 aa24.04■■□□□ 1.44
RAPGEF1-206ENST00000438647 SDK2Q58EX2 2172 aa24.04■■□□□ 1.44
RAPGEF1-206ENST00000438647 IGHV5-51A0A0C4DH38 117 aa24.04■■□□□ 1.44
RAPGEF1-206ENST00000438647 KPNA5O15131 536 aa24.04■■□□□ 1.44
RAPGEF1-206ENST00000438647 POLR2CP19387 275 aaPredicted RBP24.04■■□□□ 1.44
RAPGEF1-206ENST00000438647 OGNP20774 298 aaKnown RBP24.04■■□□□ 1.44
RAPGEF1-206ENST00000438647 CCR7P32248 378 aa24.04■■□□□ 1.44
RAPGEF1-206ENST00000438647 MAGEA3P43357 314 aa24.04■■□□□ 1.44
RAPGEF1-206ENST00000438647 ARCN1P48444 511 aaKnown RBP24.04■■□□□ 1.44
RAPGEF1-206ENST00000438647 PRKG2Q13237 762 aa24.04■■□□□ 1.44
RAPGEF1-206ENST00000438647 DHX34Q14147 1143 aaKnown RBP24.04■■□□□ 1.44
RAPGEF1-206ENST00000438647 TYSND1Q2T9J0 566 aa24.04■■□□□ 1.44
RAPGEF1-206ENST00000438647 ANKRD20A4Q4UJ75 823 aa24.04■■□□□ 1.44
RAPGEF1-206ENST00000438647 RNASEH2BQ5TBB1 312 aaKnown RBP24.04■■□□□ 1.44
RAPGEF1-206ENST00000438647 NAPRTQ6XQN6 538 aa24.04■■□□□ 1.44
RAPGEF1-206ENST00000438647 SYDE1Q6ZW31 735 aaPredicted RBP24.04■■□□□ 1.44
RAPGEF1-206ENST00000438647 AMIGO1Q86WK6 493 aa24.04■■□□□ 1.44
RAPGEF1-206ENST00000438647 SLC22A15Q8IZD6 547 aa24.04■■□□□ 1.44
RAPGEF1-206ENST00000438647 IL22RA1Q8N6P7 574 aa24.04■■□□□ 1.44
RAPGEF1-206ENST00000438647 SIDT2Q8NBJ9 832 aaKnown RBP24.04■■□□□ 1.44
RAPGEF1-206ENST00000438647 ZNF669Q96BR6 464 aaPredicted RBP24.04■■□□□ 1.44
RAPGEF1-206ENST00000438647 UBL7Q96S82 380 aaPredicted RBP24.04■■□□□ 1.44
RAPGEF1-206ENST00000438647 RPS6KL1Q9Y6S9 549 aa24.04■■□□□ 1.44
RAPGEF1-206ENST00000438647 IQCF5A8MTL0 148 aa24.03■■□□□ 1.44
RAPGEF1-206ENST00000438647 BHMG1C9JSJ3 638 aaPredicted RBP24.03■■□□□ 1.44
RAPGEF1-206ENST00000438647 GOLGA8KD6RF30 607 aa24.03■■□□□ 1.44
RAPGEF1-206ENST00000438647 H3BMM5 538 aa24.03■■□□□ 1.44
RAPGEF1-206ENST00000438647 GOLGA8TH3BQL2 631 aa24.03■■□□□ 1.44
RAPGEF1-206ENST00000438647 CCDC188H7C350 402 aa24.03■■□□□ 1.44
RAPGEF1-206ENST00000438647 DNALI1O14645 258 aaPredicted RBP24.03■■□□□ 1.44
RAPGEF1-206ENST00000438647 RAD1O60671 282 aa24.03■■□□□ 1.44
RAPGEF1-206ENST00000438647 SH3BP2P78314 561 aa24.03■■□□□ 1.44
RAPGEF1-206ENST00000438647 DNAJC21Q5F1R6 531 aaKnown RBP24.03■■□□□ 1.44
RAPGEF1-206ENST00000438647 NEPROQ6NW34 567 aa24.03■■□□□ 1.44
RAPGEF1-206ENST00000438647 TMEM135Q86UB9 458 aa24.03■■□□□ 1.44
RAPGEF1-206ENST00000438647 HOOK3Q86VS8 718 aa24.03■■□□□ 1.44
RAPGEF1-206ENST00000438647 OR5AR1Q8NGP9 310 aa24.03■■□□□ 1.44
RAPGEF1-206ENST00000438647 OR5K2Q8NHB8 316 aa24.03■■□□□ 1.44
RAPGEF1-206ENST00000438647 GSDMBQ8TAX9 411 aa24.03■■□□□ 1.44
RAPGEF1-206ENST00000438647 NKD1Q969G9 470 aa24.03■■□□□ 1.44
RAPGEF1-206ENST00000438647 PDE7BQ9NP56 450 aa24.03■■□□□ 1.44
RAPGEF1-206ENST00000438647 KCND1Q9NSA2 647 aa24.03■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms