RNA–Protein interactions for RNA: ENST00000438419.6

TRAPPC13-204, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-204ENST00000438419 SLA2Q9H6Q3 261 aa3.46□□□□□ -1.86
TRAPPC13-204ENST00000438419 SH3GLB2Q9NR46 395 aa3.46□□□□□ -1.86
TRAPPC13-204ENST00000438419 MRGBPQ9NV56 204 aa3.46□□□□□ -1.86
TRAPPC13-204ENST00000438419 HAO2Q9NYQ3 351 aa3.46□□□□□ -1.86
TRAPPC13-204ENST00000438419 GDE1Q9NZC3 331 aa3.46□□□□□ -1.86
TRAPPC13-204ENST00000438419 CRNNQ9UBG3 495 aaPredicted RBP3.46□□□□□ -1.86
TRAPPC13-204ENST00000438419 ZNF541Q9H0D2 1346 aa3.46□□□□□ -1.86
TRAPPC13-204ENST00000438419 TCRBV21S2A2A0A5A6 115 aa3.45□□□□□ -1.86
TRAPPC13-204ENST00000438419 MED19A0JLT2 244 aaPredicted RBP3.45□□□□□ -1.86
TRAPPC13-204ENST00000438419 CYSRT1A8MQ03 144 aa3.45□□□□□ -1.86
TRAPPC13-204ENST00000438419 A8MXE2 369 aa3.45□□□□□ -1.86
TRAPPC13-204ENST00000438419 TO15178 435 aa3.45□□□□□ -1.86
TRAPPC13-204ENST00000438419 PRKNO60260 465 aaPredicted RBP3.45□□□□□ -1.86
TRAPPC13-204ENST00000438419 GCNT3O95395 438 aa3.45□□□□□ -1.86
TRAPPC13-204ENST00000438419 TRUB2O95900 331 aaKnown RBP3.45□□□□□ -1.86
TRAPPC13-204ENST00000438419 ANOS1P23352 680 aa3.45□□□□□ -1.86
TRAPPC13-204ENST00000438419 NR2C2P49116 596 aa3.45□□□□□ -1.86
TRAPPC13-204ENST00000438419 RAD23AP54725 363 aa3.45□□□□□ -1.86
TRAPPC13-204ENST00000438419 CSE1LP55060 971 aaKnown RBP3.45□□□□□ -1.86
TRAPPC13-204ENST00000438419 CDK3Q00526 305 aa3.45□□□□□ -1.86
TRAPPC13-204ENST00000438419 MBTD1Q05BQ5 628 aa3.45□□□□□ -1.86
TRAPPC13-204ENST00000438419 RALGDSQ12967 914 aa3.45□□□□□ -1.86
TRAPPC13-204ENST00000438419 MFAP5Q13361 173 aa3.45□□□□□ -1.86
TRAPPC13-204ENST00000438419 KRTAP24-1Q3LI83 254 aa3.45□□□□□ -1.86
TRAPPC13-204ENST00000438419 C9orf50Q5SZB4 431 aa3.45□□□□□ -1.86
TRAPPC13-204ENST00000438419 Q6ZTC4 211 aa3.45□□□□□ -1.86
TRAPPC13-204ENST00000438419 TRMT1LQ7Z2T5 733 aaKnown RBP3.45□□□□□ -1.86
TRAPPC13-204ENST00000438419 SLFN11Q7Z7L1 901 aa3.45□□□□□ -1.86
TRAPPC13-204ENST00000438419 ADIPOR2Q86V24 386 aa3.45□□□□□ -1.86
TRAPPC13-204ENST00000438419 DCUN1D3Q8IWE4 304 aa3.45□□□□□ -1.86
TRAPPC13-204ENST00000438419 FAM9BQ8IZU0 186 aa3.45□□□□□ -1.86
TRAPPC13-204ENST00000438419 TC2NQ8N9U0 490 aa3.45□□□□□ -1.86
TRAPPC13-204ENST00000438419 L3MBTL4Q8NA19 623 aa3.45□□□□□ -1.86
TRAPPC13-204ENST00000438419 Q8NFD4 153 aa3.45□□□□□ -1.86
TRAPPC13-204ENST00000438419 WDR20Q8TBZ3 569 aa3.45□□□□□ -1.86
TRAPPC13-204ENST00000438419 FAM81BQ96LP2 452 aa3.45□□□□□ -1.86
TRAPPC13-204ENST00000438419 ZNF582Q96NG8 517 aaPredicted RBP3.45□□□□□ -1.86
TRAPPC13-204ENST00000438419 OR6C1Q96RD1 312 aa3.45□□□□□ -1.86
TRAPPC13-204ENST00000438419 NODALQ96S42 347 aa3.45□□□□□ -1.86
TRAPPC13-204ENST00000438419 TFB2MQ9H5Q4 396 aaKnown RBP3.45□□□□□ -1.86
TRAPPC13-204ENST00000438419 ERVMER34-1Q9H9K5 563 aa3.45□□□□□ -1.86
TRAPPC13-204ENST00000438419 APOBEC3GQ9HC16 384 aaKnown RBP3.45□□□□□ -1.86
TRAPPC13-204ENST00000438419 ZNF334Q9HCZ1 680 aaPredicted RBP3.45□□□□□ -1.86
TRAPPC13-204ENST00000438419 SLC38A7Q9NVC3 462 aa3.45□□□□□ -1.86
TRAPPC13-204ENST00000438419 GRIP1Q9Y3R0 1128 aa3.45□□□□□ -1.86
TRAPPC13-204ENST00000438419 A0A0B4J293 547 aa3.44□□□□□ -1.86
TRAPPC13-204ENST00000438419 ELOVL7A1L3X0 281 aa3.44□□□□□ -1.86
TRAPPC13-204ENST00000438419 UMODP07911 640 aa3.44□□□□□ -1.86
TRAPPC13-204ENST00000438419 GLULP15104 373 aa3.44□□□□□ -1.86
TRAPPC13-204ENST00000438419 PAX1P15863 534 aa3.44□□□□□ -1.86
TRAPPC13-204ENST00000438419 GABRA5P31644 462 aa3.44□□□□□ -1.86
TRAPPC13-204ENST00000438419 PSMC4P43686 418 aa3.44□□□□□ -1.86
TRAPPC13-204ENST00000438419 DMP1Q13316 513 aaPredicted RBP3.44□□□□□ -1.86
TRAPPC13-204ENST00000438419 ALDH1L2Q3SY69 923 aa3.44□□□□□ -1.86
TRAPPC13-204ENST00000438419 CRY2Q49AN0 593 aa3.44□□□□□ -1.86
TRAPPC13-204ENST00000438419 CBWD6Q4V339 395 aa3.44□□□□□ -1.86
TRAPPC13-204ENST00000438419 CBWD3Q5JTY5 395 aa3.44□□□□□ -1.86
TRAPPC13-204ENST00000438419 CHST3Q7LGC8 479 aa3.44□□□□□ -1.86
TRAPPC13-204ENST00000438419 IQCHQ86VS3 1027 aa3.44□□□□□ -1.86
TRAPPC13-204ENST00000438419 CIARTQ8N365 385 aaPredicted RBP3.44□□□□□ -1.86
TRAPPC13-204ENST00000438419 PPFIBP2Q8ND30 876 aa3.44□□□□□ -1.86
TRAPPC13-204ENST00000438419 TAS1R2Q8TE23 839 aa3.44□□□□□ -1.86
TRAPPC13-204ENST00000438419 ZNF473Q8WTR7 871 aaKnown RBP3.44□□□□□ -1.86
TRAPPC13-204ENST00000438419 SPACA9Q96E40 222 aaPredicted RBP3.44□□□□□ -1.86
TRAPPC13-204ENST00000438419 SIPA1Q96FS4 1042 aa3.44□□□□□ -1.86
TRAPPC13-204ENST00000438419 SPATA17Q96L03 361 aa3.44□□□□□ -1.86
TRAPPC13-204ENST00000438419 PRMT6Q96LA8 375 aaPredicted RBP3.44□□□□□ -1.86
TRAPPC13-204ENST00000438419 LINC00615Q96LM1 132 aaPredicted RBP3.44□□□□□ -1.86
TRAPPC13-204ENST00000438419 ZNF830Q96NB3 372 aaPredicted RBP3.44□□□□□ -1.86
TRAPPC13-204ENST00000438419 OPA3Q9H6K4 179 aa3.44□□□□□ -1.86
TRAPPC13-204ENST00000438419 ZBTB20Q9HC78 741 aaPredicted RBP3.44□□□□□ -1.86
TRAPPC13-204ENST00000438419 ZNF112Q9UJU3 913 aa3.44□□□□□ -1.86
TRAPPC13-204ENST00000438419 ANAPC5Q9UJX4 755 aa3.44□□□□□ -1.86
TRAPPC13-204ENST00000438419 CCL27Q9Y4X3 112 aa3.44□□□□□ -1.86
TRAPPC13-204ENST00000438419 TCF20Q9UGU0 1960 aaKnown RBP3.44□□□□□ -1.86
TRAPPC13-204ENST00000438419 TEX13DA0A0J9YY54 714 aaPredicted RBP3.44□□□□□ -1.86
TRAPPC13-204ENST00000438419 EDDM13A0A1B0GTR0 161 aa3.44□□□□□ -1.86
TRAPPC13-204ENST00000438419 PRSS51A0A1B0GVH4 220 aa3.44□□□□□ -1.86
TRAPPC13-204ENST00000438419 FAM72CH0Y354 149 aa3.44□□□□□ -1.86
TRAPPC13-204ENST00000438419 SPRY1O43609 319 aaPredicted RBP3.44□□□□□ -1.86
TRAPPC13-204ENST00000438419 TSPAN1O60635 241 aa3.44□□□□□ -1.86
TRAPPC13-204ENST00000438419 TBCAO75347 108 aaKnown RBP3.44□□□□□ -1.86
TRAPPC13-204ENST00000438419 MED24O75448 989 aa3.44□□□□□ -1.86
TRAPPC13-204ENST00000438419 SLCO2B1O94956 709 aa3.44□□□□□ -1.86
TRAPPC13-204ENST00000438419 PRSS1P07477 247 aa3.44□□□□□ -1.86
TRAPPC13-204ENST00000438419 PFKFB1P16118 471 aa3.44□□□□□ -1.86
TRAPPC13-204ENST00000438419 CKMT2P17540 419 aa3.44□□□□□ -1.86
TRAPPC13-204ENST00000438419 ZNF41P51814 821 aaPredicted RBP3.44□□□□□ -1.86
TRAPPC13-204ENST00000438419 RPS18P62269 152 aaKnown RBP3.44□□□□□ -1.86
TRAPPC13-204ENST00000438419 PPARDQ03181 441 aa3.44□□□□□ -1.86
TRAPPC13-204ENST00000438419 COG2Q14746 738 aa3.44□□□□□ -1.86
TRAPPC13-204ENST00000438419 TNIP1Q15025 636 aa3.44□□□□□ -1.86
TRAPPC13-204ENST00000438419 FAM72AQ5TYM5 149 aa3.44□□□□□ -1.86
TRAPPC13-204ENST00000438419 CST9LP1Q5W188 147 aa3.44□□□□□ -1.86
TRAPPC13-204ENST00000438419 FAM72DQ6L9T8 149 aa3.44□□□□□ -1.86
TRAPPC13-204ENST00000438419 SHQ1Q6PI26 577 aaKnown RBP3.44□□□□□ -1.86
TRAPPC13-204ENST00000438419 MEX3BQ6ZN04 569 aaKnown RBP3.44□□□□□ -1.86
TRAPPC13-204ENST00000438419 USP43Q70EL4 1123 aa3.44□□□□□ -1.86
TRAPPC13-204ENST00000438419 SLC26A9Q7LBE3 791 aa3.44□□□□□ -1.86
TRAPPC13-204ENST00000438419 ANKRD23Q86SG2 305 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms