RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 AIG1Q9NVV5 245 aa6.58□□□□□ -1.36
CSDE1-205ENST00000438362 OGDHLQ9ULD0 1010 aa6.58□□□□□ -1.36
CSDE1-205ENST00000438362 A0A0J9YVX5 310 aa6.57□□□□□ -1.36
CSDE1-205ENST00000438362 LOC100130705A0A1B0GUX0 176 aa6.57□□□□□ -1.36
CSDE1-205ENST00000438362 RBM47A0AV96 593 aaKnown RBP6.57□□□□□ -1.36
CSDE1-205ENST00000438362 ANKRD66B4E2M5 251 aa6.57□□□□□ -1.36
CSDE1-205ENST00000438362 TNFRSF11BO00300 401 aa6.57□□□□□ -1.36
CSDE1-205ENST00000438362 PGRP06401 933 aa6.57□□□□□ -1.36
CSDE1-205ENST00000438362 TSPAN19P0C672 248 aa6.57□□□□□ -1.36
CSDE1-205ENST00000438362 CAPN3P20807 821 aa6.57□□□□□ -1.36
CSDE1-205ENST00000438362 MYF6P23409 242 aa6.57□□□□□ -1.36
CSDE1-205ENST00000438362 FMO3P31513 532 aa6.57□□□□□ -1.36
CSDE1-205ENST00000438362 ASMTP46597 345 aa6.57□□□□□ -1.36
CSDE1-205ENST00000438362 TMBIM6P55061 237 aa6.57□□□□□ -1.36
CSDE1-205ENST00000438362 CHIT1Q13231 466 aa6.57□□□□□ -1.36
CSDE1-205ENST00000438362 LRP8Q14114 963 aa6.57□□□□□ -1.36
CSDE1-205ENST00000438362 ACOX1Q15067 660 aa6.57□□□□□ -1.36
CSDE1-205ENST00000438362 NPTX1Q15818 432 aa6.57□□□□□ -1.36
CSDE1-205ENST00000438362 MEP1AQ16819 746 aa6.57□□□□□ -1.36
CSDE1-205ENST00000438362 COQ5Q5HYK3 327 aa6.57□□□□□ -1.36
CSDE1-205ENST00000438362 FUT10Q6P4F1 479 aa6.57□□□□□ -1.36
CSDE1-205ENST00000438362 KLHL35Q6PF15 583 aa6.57□□□□□ -1.36
CSDE1-205ENST00000438362 ATG14Q6ZNE5 492 aa6.57□□□□□ -1.36
CSDE1-205ENST00000438362 C11orf65Q8NCR3 313 aa6.57□□□□□ -1.36
CSDE1-205ENST00000438362 L3HYPDHQ96EM0 354 aa6.57□□□□□ -1.36
CSDE1-205ENST00000438362 C8orf48Q96LL4 319 aa6.57□□□□□ -1.36
CSDE1-205ENST00000438362 MYRFLQ96LU7 910 aa6.57□□□□□ -1.36
CSDE1-205ENST00000438362 GSTO2Q9H4Y5 243 aa6.57□□□□□ -1.36
CSDE1-205ENST00000438362 SMURF2Q9HAU4 748 aa6.57□□□□□ -1.36
CSDE1-205ENST00000438362 NMUR1Q9HB89 426 aa6.57□□□□□ -1.36
CSDE1-205ENST00000438362 SPG21Q9NZD8 308 aa6.57□□□□□ -1.36
CSDE1-205ENST00000438362 EBF1Q9UH73 591 aa6.57□□□□□ -1.36
CSDE1-205ENST00000438362 PHF24Q9UPV7 400 aa6.57□□□□□ -1.36
CSDE1-205ENST00000438362 FCF1Q9Y324 198 aaKnown RBP6.57□□□□□ -1.36
CSDE1-205ENST00000438362 ILVBLA1L0T0 632 aa6.57□□□□□ -1.36
CSDE1-205ENST00000438362 MAGEB17A8MXT2 336 aa6.57□□□□□ -1.36
CSDE1-205ENST00000438362 EOMESO95936 686 aa6.57□□□□□ -1.36
CSDE1-205ENST00000438362 EIF2S1P05198 315 aaKnown RBP6.57□□□□□ -1.36
CSDE1-205ENST00000438362 ELK4P28324 431 aa6.57□□□□□ -1.36
CSDE1-205ENST00000438362 KCNQ1P51787 676 aa6.57□□□□□ -1.36
CSDE1-205ENST00000438362 SLC16A1P53985 500 aa6.57□□□□□ -1.36
CSDE1-205ENST00000438362 INHBCP55103 352 aa6.57□□□□□ -1.36
CSDE1-205ENST00000438362 INHBEP58166 350 aa6.57□□□□□ -1.36
CSDE1-205ENST00000438362 CSNK2BP67870 215 aa6.57□□□□□ -1.36
CSDE1-205ENST00000438362 TUBB3Q13509 450 aa6.57□□□□□ -1.36
CSDE1-205ENST00000438362 CCL14Q16627 93 aa6.57□□□□□ -1.36
CSDE1-205ENST00000438362 CYP2A13Q16696 494 aa6.57□□□□□ -1.36
CSDE1-205ENST00000438362 UPP1Q16831 310 aa6.57□□□□□ -1.36
CSDE1-205ENST00000438362 DGKKQ5KSL6 1271 aa6.57□□□□□ -1.36
CSDE1-205ENST00000438362 SPANXN4Q5MJ08 99 aa6.57□□□□□ -1.36
CSDE1-205ENST00000438362 CYP4V2Q6ZWL3 525 aaPredicted RBP6.57□□□□□ -1.36
CSDE1-205ENST00000438362 GOLGA7Q7Z5G4 137 aa6.57□□□□□ -1.36
CSDE1-205ENST00000438362 TRAPPC5Q8IUR0 188 aa6.57□□□□□ -1.36
CSDE1-205ENST00000438362 CYP4Z2PQ8N1L4 340 aa6.57□□□□□ -1.36
CSDE1-205ENST00000438362 CENPSQ8N2Z9 138 aa6.57□□□□□ -1.36
CSDE1-205ENST00000438362 UBASH3BQ8TF42 649 aa6.57□□□□□ -1.36
CSDE1-205ENST00000438362 ASZ1Q8WWH4 475 aa6.57□□□□□ -1.36
CSDE1-205ENST00000438362 HDAC2Q92769 488 aaKnown RBP6.57□□□□□ -1.36
CSDE1-205ENST00000438362 KCNJ9Q92806 393 aa6.57□□□□□ -1.36
CSDE1-205ENST00000438362 UBE2E3Q969T4 207 aa6.57□□□□□ -1.36
CSDE1-205ENST00000438362 ZNF382Q96SR6 550 aa6.57□□□□□ -1.36
CSDE1-205ENST00000438362 TUBA1CQ9BQE3 449 aa6.57□□□□□ -1.36
CSDE1-205ENST00000438362 COPS4Q9BT78 406 aa6.57□□□□□ -1.36
CSDE1-205ENST00000438362 TRMT13Q9NUP7 481 aaKnown RBP6.57□□□□□ -1.36
CSDE1-205ENST00000438362 TMEM181Q9P2C4 612 aa6.57□□□□□ -1.36
CSDE1-205ENST00000438362 RAB23Q9ULC3 237 aa6.57□□□□□ -1.36
CSDE1-205ENST00000438362 SATB2Q9UPW6 733 aa6.57□□□□□ -1.36
CSDE1-205ENST00000438362 IQCF5A8MTL0 148 aa6.57□□□□□ -1.36
CSDE1-205ENST00000438362 TAF4O00268 1085 aa6.57□□□□□ -1.36
CSDE1-205ENST00000438362 PLK4O00444 970 aa6.57□□□□□ -1.36
CSDE1-205ENST00000438362 KPNA3O00505 521 aaPredicted RBP6.57□□□□□ -1.36
CSDE1-205ENST00000438362 PER2O15055 1255 aa6.57□□□□□ -1.36
CSDE1-205ENST00000438362 ADAMDEC1O15204 470 aa6.57□□□□□ -1.36
CSDE1-205ENST00000438362 CREG1O75629 220 aa6.57□□□□□ -1.36
CSDE1-205ENST00000438362 CNMDO75829 334 aa6.57□□□□□ -1.36
CSDE1-205ENST00000438362 CKBP12277 381 aa6.57□□□□□ -1.36
CSDE1-205ENST00000438362 EPORP19235 508 aa6.57□□□□□ -1.36
CSDE1-205ENST00000438362 KCNA5P22460 613 aa6.57□□□□□ -1.36
CSDE1-205ENST00000438362 FDXRP22570 491 aa6.57□□□□□ -1.36
CSDE1-205ENST00000438362 TALDO1P37837 337 aa6.57□□□□□ -1.36
CSDE1-205ENST00000438362 NSG1P42857 185 aa6.57□□□□□ -1.36
CSDE1-205ENST00000438362 ITGA1P56199 1179 aa6.57□□□□□ -1.36
CSDE1-205ENST00000438362 SRSF11Q05519 484 aaKnown RBP6.57□□□□□ -1.36
CSDE1-205ENST00000438362 KCNAB2Q13303 367 aa6.57□□□□□ -1.36
CSDE1-205ENST00000438362 LAPTM5Q13571 262 aa6.57□□□□□ -1.36
CSDE1-205ENST00000438362 GK3PQ14409 553 aa6.57□□□□□ -1.36
CSDE1-205ENST00000438362 KCNA10Q16322 511 aa6.57□□□□□ -1.36
CSDE1-205ENST00000438362 DPY19L1Q2PZI1 675 aa6.57□□□□□ -1.36
CSDE1-205ENST00000438362 SETMARQ53H47 684 aaPredicted RBP6.57□□□□□ -1.36
CSDE1-205ENST00000438362 ATXN7L2Q5T6C5 722 aaPredicted RBP6.57□□□□□ -1.36
CSDE1-205ENST00000438362 AGMOQ6ZNB7 445 aa6.57□□□□□ -1.36
CSDE1-205ENST00000438362 PTCHD4Q6ZW05 846 aa6.57□□□□□ -1.36
CSDE1-205ENST00000438362 SYVN1Q86TM6 617 aa6.57□□□□□ -1.36
CSDE1-205ENST00000438362 LILRA2Q8N149 483 aa6.57□□□□□ -1.36
CSDE1-205ENST00000438362 NAT16Q8N8M0 369 aa6.57□□□□□ -1.36
CSDE1-205ENST00000438362 PNPLA1Q8N8W4 532 aa6.57□□□□□ -1.36
CSDE1-205ENST00000438362 OR4A15Q8NGL6 344 aa6.57□□□□□ -1.36
CSDE1-205ENST00000438362 UPF1Q92900 1129 aaKnown RBP eCLIP6.57□□□□□ -1.362e-6■■□□□ 14.2
CSDE1-205ENST00000438362 NSUN3Q9H649 340 aaKnown RBP6.57□□□□□ -1.36
CSDE1-205ENST00000438362 CCSER2Q9H7U1 834 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms