RNA–Protein interactions for RNA: ENST00000436638.5

ECHDC1-208, Transcript of ethylmalonyl-CoA decarboxylase 1, human

APPRIS ALT2 TSL 3

Gene ECHDC1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-208	ENST00000436638	ALPI	P09923	528 aa		6.11	□□□□□ -1.43
ECHDC1-208	ENST00000436638	TDGF1	P13385	188 aa		6.11	□□□□□ -1.43
ECHDC1-208	ENST00000436638	GNS	P15586	552 aa		6.11	□□□□□ -1.43
ECHDC1-208	ENST00000436638	ALOX15	P16050	662 aa	Predicted RBP	6.11	□□□□□ -1.43
ECHDC1-208	ENST00000436638	ZNF30	P17039	623 aa		6.11	□□□□□ -1.43
ECHDC1-208	ENST00000436638	TPSB2	P20231	275 aa		6.11	□□□□□ -1.43
ECHDC1-208	ENST00000436638	BCKDHB	P21953	392 aa		6.11	□□□□□ -1.43
ECHDC1-208	ENST00000436638	MAT2A	P31153	395 aa	Known RBP	6.11	□□□□□ -1.43
ECHDC1-208	ENST00000436638	AKT2	P31751	481 aa		6.11	□□□□□ -1.43
ECHDC1-208	ENST00000436638	HNF1B	P35680	557 aa		6.11	□□□□□ -1.43
ECHDC1-208	ENST00000436638	NPY2R	P49146	381 aa		6.11	□□□□□ -1.43
ECHDC1-208	ENST00000436638	CCR5	P51681	352 aa		6.11	□□□□□ -1.43
ECHDC1-208	ENST00000436638	HNRNPH2	P55795	449 aa	Known RBP	6.11	□□□□□ -1.43
ECHDC1-208	ENST00000436638	DSTN	P60981	165 aa		6.11	□□□□□ -1.43
ECHDC1-208	ENST00000436638	PDE1B	Q01064	536 aa		6.11	□□□□□ -1.43
ECHDC1-208	ENST00000436638	SEMG2	Q02383	582 aa		6.11	□□□□□ -1.43
ECHDC1-208	ENST00000436638	MPP2	Q14168	576 aa		6.11	□□□□□ -1.43
ECHDC1-208	ENST00000436638	TPSAB1	Q15661	275 aa		6.11	□□□□□ -1.43
ECHDC1-208	ENST00000436638	GLE1	Q53GS7	698 aa	Known RBP	6.11	□□□□□ -1.43
ECHDC1-208	ENST00000436638	SIRPB2	Q5JXA9	342 aa		6.11	□□□□□ -1.43
ECHDC1-208	ENST00000436638	LYSMD4	Q5XG99	296 aa		6.11	□□□□□ -1.43
ECHDC1-208	ENST00000436638	LIN54	Q6MZP7	749 aa		6.11	□□□□□ -1.43
ECHDC1-208	ENST00000436638	KLC3	Q6P597	504 aa		6.11	□□□□□ -1.43
ECHDC1-208	ENST00000436638	TLDC1	Q6P9B6	456 aa		6.11	□□□□□ -1.43
ECHDC1-208	ENST00000436638	RANBP10	Q6VN20	620 aa		6.11	□□□□□ -1.43
ECHDC1-208	ENST00000436638	CCDC81	Q6ZN84	652 aa		6.11	□□□□□ -1.43
ECHDC1-208	ENST00000436638	CEP128	Q6ZU80	1094 aa		6.11	□□□□□ -1.43
ECHDC1-208	ENST00000436638	NLRP9	Q7RTR0	991 aa		6.11	□□□□□ -1.43
ECHDC1-208	ENST00000436638	GLT6D1	Q7Z4J2	308 aa		6.11	□□□□□ -1.43
ECHDC1-208	ENST00000436638	TRIM69	Q86WT6	500 aa		6.11	□□□□□ -1.43
ECHDC1-208	ENST00000436638	ZSWIM9	Q86XI8	627 aa		6.11	□□□□□ -1.43
ECHDC1-208	ENST00000436638	GRAMD2A	Q8IUY3	354 aa		6.11	□□□□□ -1.43
ECHDC1-208	ENST00000436638	PPIL6	Q8IXY8	311 aa		6.11	□□□□□ -1.43
ECHDC1-208	ENST00000436638	TMEFF1	Q8IYR6	380 aa		6.11	□□□□□ -1.43
ECHDC1-208	ENST00000436638	SPART	Q8N0X7	666 aa		6.11	□□□□□ -1.43
ECHDC1-208	ENST00000436638	MMGT1	Q8N4V1	131 aa		6.11	□□□□□ -1.43
ECHDC1-208	ENST00000436638	FRMD1	Q8N878	549 aa		6.11	□□□□□ -1.43
ECHDC1-208	ENST00000436638	GLIS1	Q8NBF1	620 aa		6.11	□□□□□ -1.43
ECHDC1-208	ENST00000436638	ZBTB44	Q8NCP5	570 aa		6.11	□□□□□ -1.43
ECHDC1-208	ENST00000436638	FAM13C	Q8NE31	585 aa		6.11	□□□□□ -1.43
ECHDC1-208	ENST00000436638	PRSS33	Q8NF86	280 aa		6.11	□□□□□ -1.43
ECHDC1-208	ENST00000436638	OR52K1	Q8NGK4	314 aa		6.11	□□□□□ -1.43
ECHDC1-208	ENST00000436638	BLOC1S5	Q8TDH9	187 aa		6.11	□□□□□ -1.43
ECHDC1-208	ENST00000436638	KLK6	Q92876	244 aa		6.11	□□□□□ -1.43
ECHDC1-208	ENST00000436638	FAM131C	Q96AQ9	280 aa		6.11	□□□□□ -1.43
ECHDC1-208	ENST00000436638	SNF8	Q96H20	258 aa		6.11	□□□□□ -1.43
ECHDC1-208	ENST00000436638	SEC16B	Q96JE7	1060 aa		6.11	□□□□□ -1.43
ECHDC1-208	ENST00000436638	NSMCE3	Q96MG7	304 aa		6.11	□□□□□ -1.43
ECHDC1-208	ENST00000436638	HSPA12B	Q96MM6	686 aa		6.11	□□□□□ -1.43
ECHDC1-208	ENST00000436638	TRIB3	Q96RU7	358 aa		6.11	□□□□□ -1.43
ECHDC1-208	ENST00000436638	TRIM51	Q9BSJ1	452 aa		6.11	□□□□□ -1.43
ECHDC1-208	ENST00000436638	YIPF4	Q9BSR8	244 aa		6.11	□□□□□ -1.43
ECHDC1-208	ENST00000436638	WRAP53	Q9BUR4	548 aa	Known RBP	6.11	□□□□□ -1.43
ECHDC1-208	ENST00000436638	CCDC106	Q9BWC9	280 aa		6.11	□□□□□ -1.43
ECHDC1-208	ENST00000436638	FRMD8	Q9BZ67	464 aa	Predicted RBP	6.11	□□□□□ -1.43
ECHDC1-208	ENST00000436638	DUSP15	Q9H1R2	295 aa	Predicted RBP	6.11	□□□□□ -1.43
ECHDC1-208	ENST00000436638	DPH5	Q9H2P9	285 aa		6.11	□□□□□ -1.43
ECHDC1-208	ENST00000436638	C6orf106	Q9H6K1	298 aa	Predicted RBP	6.11	□□□□□ -1.43
ECHDC1-208	ENST00000436638	MAGEE1	Q9HCI5	957 aa		6.11	□□□□□ -1.43
ECHDC1-208	ENST00000436638	MOCS1	Q9NZB8	636 aa		6.11	□□□□□ -1.43
ECHDC1-208	ENST00000436638	PKD2L2	Q9NZM6	624 aa		6.11	□□□□□ -1.43
ECHDC1-208	ENST00000436638	BFAR	Q9NZS9	450 aa		6.11	□□□□□ -1.43
ECHDC1-208	ENST00000436638	MALT1	Q9UDY8	824 aa		6.11	□□□□□ -1.43
ECHDC1-208	ENST00000436638	ADGRE2	Q9UHX3	823 aa		6.11	□□□□□ -1.43
ECHDC1-208	ENST00000436638	EIF2B4	Q9UI10	523 aa	Known RBP	6.11	□□□□□ -1.43
ECHDC1-208	ENST00000436638	ANAPC5	Q9UJX4	755 aa		6.11	□□□□□ -1.43
ECHDC1-208	ENST00000436638	GMEB2	Q9UKD1	530 aa		6.11	□□□□□ -1.43
ECHDC1-208	ENST00000436638	PAIP2B	Q9ULR5	123 aa	Known RBP	6.11	□□□□□ -1.43
ECHDC1-208	ENST00000436638	SHOC2	Q9UQ13	582 aa		6.11	□□□□□ -1.43
ECHDC1-208	ENST00000436638	SNX24	Q9Y343	169 aa		6.11	□□□□□ -1.43
ECHDC1-208	ENST00000436638	PPIL1	Q9Y3C6	166 aa		6.11	□□□□□ -1.43
ECHDC1-208	ENST00000436638	SNX11	Q9Y5W9	270 aa		6.11	□□□□□ -1.43
ECHDC1-208	ENST00000436638		R4GN57	208 aa		6.11	□□□□□ -1.43
ECHDC1-208	ENST00000436638	HEATR9	A2RTY3	570 aa		6.1	□□□□□ -1.43
ECHDC1-208	ENST00000436638	IGLON5	A6NGN9	336 aa		6.1	□□□□□ -1.43
ECHDC1-208	ENST00000436638	NPIPB15	A6NHN6	443 aa	Predicted RBP	6.1	□□□□□ -1.43
ECHDC1-208	ENST00000436638	PRR5-ARHGAP8	B1AHC4	643 aa		6.1	□□□□□ -1.43
ECHDC1-208	ENST00000436638	PRAMEF26	H0Y7S4	382 aa		6.1	□□□□□ -1.43
ECHDC1-208	ENST00000436638		H7C0S8	307 aa		6.1	□□□□□ -1.43
ECHDC1-208	ENST00000436638	FPGT	O14772	594 aa		6.1	□□□□□ -1.43
ECHDC1-208	ENST00000436638	WNT9A	O14904	365 aa		6.1	□□□□□ -1.43
ECHDC1-208	ENST00000436638	STX7	O15400	261 aa	Known RBP	6.1	□□□□□ -1.43
ECHDC1-208	ENST00000436638	SLC31A1	O15431	190 aa		6.1	□□□□□ -1.43
ECHDC1-208	ENST00000436638	RIPK2	O43353	540 aa		6.1	□□□□□ -1.43
ECHDC1-208	ENST00000436638	SUN1	O94901	812 aa		6.1	□□□□□ -1.43
ECHDC1-208	ENST00000436638	CLDN7	O95471	211 aa		6.1	□□□□□ -1.43
ECHDC1-208	ENST00000436638	PAK4	O96013	591 aa	Predicted RBP	6.1	□□□□□ -1.43
ECHDC1-208	ENST00000436638	PRL	P01236	227 aa		6.1	□□□□□ -1.43
ECHDC1-208	ENST00000436638	ATXN1L	P0C7T5	689 aa	Known RBP	6.1	□□□□□ -1.43
ECHDC1-208	ENST00000436638	PIRT	P0C851	137 aa		6.1	□□□□□ -1.43
ECHDC1-208	ENST00000436638	C6	P13671	934 aa		6.1	□□□□□ -1.43
ECHDC1-208	ENST00000436638	TPH1	P17752	444 aa		6.1	□□□□□ -1.43
ECHDC1-208	ENST00000436638	HNRNPA2B1	P22626	353 aa	Known RBP	6.1	□□□□□ -1.43
ECHDC1-208	ENST00000436638	ADRA1A	P35348	466 aa		6.1	□□□□□ -1.43
ECHDC1-208	ENST00000436638	MMP12	P39900	470 aa		6.1	□□□□□ -1.43
ECHDC1-208	ENST00000436638	HAAO	P46952	286 aa		6.1	□□□□□ -1.43
ECHDC1-208	ENST00000436638	ITGA8	P53708	1063 aa		6.1	□□□□□ -1.43
ECHDC1-208	ENST00000436638	CLNS1A	P54105	237 aa	Known RBP	6.1	□□□□□ -1.43
ECHDC1-208	ENST00000436638	ARL4C	P56559	192 aa		6.1	□□□□□ -1.43
ECHDC1-208	ENST00000436638	SESN2	P58004	480 aa	Predicted RBP	6.1	□□□□□ -1.43

Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms