RNA–Protein interactions for RNA: ENST00000435997.2

SPTLC1P4-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 4, humanhuman

BASIC

Gene SPTLC1P4, Length 260 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P4-201ENST00000435997 CBFA2T2O43439 604 aa10.62□□□□□ -0.71
SPTLC1P4-201ENST00000435997 LDB2O43679 373 aa10.62□□□□□ -0.71
SPTLC1P4-201ENST00000435997 DPM1O60762 260 aa10.62□□□□□ -0.71
SPTLC1P4-201ENST00000435997 KLF7O75840 302 aaPredicted RBP10.62□□□□□ -0.71
SPTLC1P4-201ENST00000435997 ANXA9O76027 345 aa10.62□□□□□ -0.71
SPTLC1P4-201ENST00000435997 AGFG2O95081 481 aa10.62□□□□□ -0.71
SPTLC1P4-201ENST00000435997 CDH3P22223 829 aa10.62□□□□□ -0.71
SPTLC1P4-201ENST00000435997 PSMB4P28070 264 aa10.62□□□□□ -0.71
SPTLC1P4-201ENST00000435997 RBL1P28749 1068 aa10.62□□□□□ -0.71
SPTLC1P4-201ENST00000435997 PRDX3P30048 256 aaKnown RBP10.62□□□□□ -0.71
SPTLC1P4-201ENST00000435997 PTPN7P35236 360 aa10.62□□□□□ -0.71
SPTLC1P4-201ENST00000435997 CD151P48509 253 aa10.62□□□□□ -0.71
SPTLC1P4-201ENST00000435997 PRKAA1Q13131 559 aa10.62□□□□□ -0.71
SPTLC1P4-201ENST00000435997 TBX2Q13207 712 aaPredicted RBP10.62□□□□□ -0.71
SPTLC1P4-201ENST00000435997 INPP5JQ15735 1006 aaPredicted RBP10.62□□□□□ -0.71
SPTLC1P4-201ENST00000435997 C4orf17Q53FE4 359 aa10.62□□□□□ -0.71
SPTLC1P4-201ENST00000435997 HIST2H2BCQ6DN03 193 aa10.62□□□□□ -0.71
SPTLC1P4-201ENST00000435997 ITPRIPL1Q6GPH6 555 aa10.62□□□□□ -0.71
SPTLC1P4-201ENST00000435997 CDHR3Q6ZTQ4 885 aa10.62□□□□□ -0.71
SPTLC1P4-201ENST00000435997 MED25Q71SY5 747 aa10.62□□□□□ -0.71
SPTLC1P4-201ENST00000435997 SNX20Q7Z614 316 aa10.62□□□□□ -0.71
SPTLC1P4-201ENST00000435997 CNGA4Q8IV77 575 aa10.62□□□□□ -0.71
SPTLC1P4-201ENST00000435997 CFAP206Q8IYR0 622 aa10.62□□□□□ -0.71
SPTLC1P4-201ENST00000435997 OR52E1Q8NGJ3 308 aa10.62□□□□□ -0.71
SPTLC1P4-201ENST00000435997 HEXDCQ8WVB3 486 aa10.62□□□□□ -0.71
SPTLC1P4-201ENST00000435997 PNPLA2Q96AD5 504 aa10.62□□□□□ -0.71
SPTLC1P4-201ENST00000435997 RBM41Q96IZ5 413 aaKnown RBP10.62□□□□□ -0.71
SPTLC1P4-201ENST00000435997 TRAPPC9Q96Q05 1148 aa10.62□□□□□ -0.71
SPTLC1P4-201ENST00000435997 DPH2Q9BQC3 489 aaPredicted RBP10.62□□□□□ -0.71
SPTLC1P4-201ENST00000435997 ANP32EQ9BTT0 268 aa10.62□□□□□ -0.71
SPTLC1P4-201ENST00000435997 DHRS4Q9BTZ2 278 aa10.62□□□□□ -0.71
SPTLC1P4-201ENST00000435997 CHRNA10Q9GZZ6 450 aa10.62□□□□□ -0.71
SPTLC1P4-201ENST00000435997 SRMSQ9H3Y6 488 aa10.62□□□□□ -0.71
SPTLC1P4-201ENST00000435997 C10orf88Q9H8K7 445 aa10.62□□□□□ -0.71
SPTLC1P4-201ENST00000435997 ACTR5Q9H9F9 607 aaPredicted RBP10.62□□□□□ -0.71
SPTLC1P4-201ENST00000435997 ARNT2Q9HBZ2 717 aa10.62□□□□□ -0.71
SPTLC1P4-201ENST00000435997 FAM8A1Q9UBU6 413 aa10.62□□□□□ -0.71
SPTLC1P4-201ENST00000435997 EFR3BQ9Y2G0 817 aa10.62□□□□□ -0.71
SPTLC1P4-201ENST00000435997 CFAP99D6REC4 459 aa10.61□□□□□ -0.71
SPTLC1P4-201ENST00000435997 DDX3YO15523 660 aaKnown RBP10.61□□□□□ -0.71
SPTLC1P4-201ENST00000435997 PJA2O43164 708 aa10.61□□□□□ -0.71
SPTLC1P4-201ENST00000435997 CRTAMO95727 393 aa10.61□□□□□ -0.71
SPTLC1P4-201ENST00000435997 POLBP06746 335 aa10.61□□□□□ -0.71
SPTLC1P4-201ENST00000435997 RALBP11234 206 aa10.61□□□□□ -0.71
SPTLC1P4-201ENST00000435997 ATP1B2P14415 290 aaPredicted RBP10.61□□□□□ -0.71
SPTLC1P4-201ENST00000435997 PVRP15151 417 aa10.61□□□□□ -0.71
SPTLC1P4-201ENST00000435997 ITGALP20701 1170 aa10.61□□□□□ -0.71
SPTLC1P4-201ENST00000435997 ACRV1P26436 265 aa10.61□□□□□ -0.71
SPTLC1P4-201ENST00000435997 CTNNA1P35221 906 aaKnown RBP10.61□□□□□ -0.71
SPTLC1P4-201ENST00000435997 HADHAP40939 763 aa10.61□□□□□ -0.71
SPTLC1P4-201ENST00000435997 PREPP48147 710 aa10.61□□□□□ -0.71
SPTLC1P4-201ENST00000435997 GABRA4P48169 554 aa10.61□□□□□ -0.71
SPTLC1P4-201ENST00000435997 LMAN1P49257 510 aa10.61□□□□□ -0.71
SPTLC1P4-201ENST00000435997 COPS2P61201 443 aa10.61□□□□□ -0.71
SPTLC1P4-201ENST00000435997 RPA4Q13156 261 aa10.61□□□□□ -0.71
SPTLC1P4-201ENST00000435997 ATP1A4Q13733 1029 aa10.61□□□□□ -0.71
SPTLC1P4-201ENST00000435997 BOP1Q14137 746 aaKnown RBP10.61□□□□□ -0.71
SPTLC1P4-201ENST00000435997 PTCHD3Q3KNS1 767 aa10.61□□□□□ -0.71
SPTLC1P4-201ENST00000435997 KCTD11Q693B1 232 aa10.61□□□□□ -0.71
SPTLC1P4-201ENST00000435997 MRGPREQ86SM8 312 aa10.61□□□□□ -0.71
SPTLC1P4-201ENST00000435997 ADGRF3Q8IZF5 1079 aa10.61□□□□□ -0.71
SPTLC1P4-201ENST00000435997 FLVCR1-AS1Q8TAF5 88 aa10.61□□□□□ -0.71
SPTLC1P4-201ENST00000435997 ACTL9Q8TC94 416 aa10.61□□□□□ -0.71
SPTLC1P4-201ENST00000435997 LCN9Q8WX39 176 aa10.61□□□□□ -0.71
SPTLC1P4-201ENST00000435997 DCUN1D1Q96GG9 259 aa10.61□□□□□ -0.71
SPTLC1P4-201ENST00000435997 SPATA13Q96N96 652 aa10.61□□□□□ -0.71
SPTLC1P4-201ENST00000435997 COPS8Q99627 209 aa10.61□□□□□ -0.71
SPTLC1P4-201ENST00000435997 APOL2Q9BQE5 337 aa10.61□□□□□ -0.71
SPTLC1P4-201ENST00000435997 MVB12BQ9H7P6 319 aa10.61□□□□□ -0.71
SPTLC1P4-201ENST00000435997 GPR83Q9NYM4 423 aa10.61□□□□□ -0.71
SPTLC1P4-201ENST00000435997 FEZ2Q9UHY8 353 aaPredicted RBP10.61□□□□□ -0.71
SPTLC1P4-201ENST00000435997 CRLS1Q9UJA2 301 aa10.61□□□□□ -0.71
SPTLC1P4-201ENST00000435997 AAR2Q9Y312 384 aaKnown RBP10.61□□□□□ -0.71
SPTLC1P4-201ENST00000435997 RP1L1Q8IWN7 2480 aaPredicted RBP10.6□□□□□ -0.71
SPTLC1P4-201ENST00000435997 GSAPA4D1B5 854 aa10.6□□□□□ -0.71
SPTLC1P4-201ENST00000435997 WIPF3A6NGB9 483 aa10.6□□□□□ -0.71
SPTLC1P4-201ENST00000435997 E7EQ34 232 aa10.6□□□□□ -0.71
SPTLC1P4-201ENST00000435997 ZNF749O43361 778 aa10.6□□□□□ -0.71
SPTLC1P4-201ENST00000435997 GSTM1P09488 218 aa10.6□□□□□ -0.71
SPTLC1P4-201ENST00000435997 TPM1P09493 284 aa10.6□□□□□ -0.71
SPTLC1P4-201ENST00000435997 CYP2A7P20853 494 aa10.6□□□□□ -0.71
SPTLC1P4-201ENST00000435997 PSMA3P25788 255 aa10.6□□□□□ -0.71
SPTLC1P4-201ENST00000435997 VARSP26640 1264 aaKnown RBP10.6□□□□□ -0.71
SPTLC1P4-201ENST00000435997 PDHA2P29803 388 aa10.6□□□□□ -0.71
SPTLC1P4-201ENST00000435997 MC4RP32245 332 aa10.6□□□□□ -0.71
SPTLC1P4-201ENST00000435997 RRADP55042 308 aa10.6□□□□□ -0.71
SPTLC1P4-201ENST00000435997 OTUD4Q01804 1114 aaKnown RBP10.6□□□□□ -0.71
SPTLC1P4-201ENST00000435997 GSTM4Q03013 218 aa10.6□□□□□ -0.71
SPTLC1P4-201ENST00000435997 MRPL49Q13405 166 aaKnown RBP10.6□□□□□ -0.71
SPTLC1P4-201ENST00000435997 GSE1Q14687 1217 aa10.6□□□□□ -0.71
SPTLC1P4-201ENST00000435997 ZIC1Q15915 447 aa10.6□□□□□ -0.71
SPTLC1P4-201ENST00000435997 GPR33Q49SQ1 333 aa10.6□□□□□ -0.71
SPTLC1P4-201ENST00000435997 ANKRD20A2Q5SQ80 823 aa10.6□□□□□ -0.71
SPTLC1P4-201ENST00000435997 VWA5B1Q5TIE3 1220 aa10.6□□□□□ -0.71
SPTLC1P4-201ENST00000435997 ANKRD20A1Q5TYW2 823 aa10.6□□□□□ -0.71
SPTLC1P4-201ENST00000435997 ANKRD20A3Q5VUR7 823 aa10.6□□□□□ -0.71
SPTLC1P4-201ENST00000435997 SARM1Q6SZW1 724 aa10.6□□□□□ -0.71
SPTLC1P4-201ENST00000435997 SPESP1Q6UW49 350 aa10.6□□□□□ -0.71
SPTLC1P4-201ENST00000435997 IGFL3Q6UXB1 125 aa10.6□□□□□ -0.71
SPTLC1P4-201ENST00000435997 MICALCLQ6ZW33 695 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms