RNA–Protein interactions for RNA: ENST00000433661.1

PTP4A1P3-201, Transcript of protein tyrosine phosphatase type IVA, member 1 pseudogene 3, humanhuman

BASIC

Gene PTP4A1P3, Length 420 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1P3-201ENST00000433661 OPA3Q9H6K4 179 aa4.99□□□□□ -1.61
PTP4A1P3-201ENST00000433661 ZWILCHQ9H900 591 aa4.99□□□□□ -1.61
PTP4A1P3-201ENST00000433661 CNOT10Q9H9A5 744 aaKnown RBP4.99□□□□□ -1.61
PTP4A1P3-201ENST00000433661 LRRC9Q6ZRR7 1453 aa4.99□□□□□ -1.61
PTP4A1P3-201ENST00000433661 EVPLQ92817 2033 aa4.99□□□□□ -1.61
PTP4A1P3-201ENST00000433661 PSMD14O00487 310 aa4.98□□□□□ -1.61
PTP4A1P3-201ENST00000433661 WDR46O15213 610 aaKnown RBP4.98□□□□□ -1.61
PTP4A1P3-201ENST00000433661 ZNHIT1O43257 154 aa4.98□□□□□ -1.61
PTP4A1P3-201ENST00000433661 GPR137BO60478 399 aa4.98□□□□□ -1.61
PTP4A1P3-201ENST00000433661 TADA2AO75478 443 aa4.98□□□□□ -1.61
PTP4A1P3-201ENST00000433661 IGKV2-30P06310 120 aa4.98□□□□□ -1.61
PTP4A1P3-201ENST00000433661 RAB40ALP0C0E4 278 aa4.98□□□□□ -1.61
PTP4A1P3-201ENST00000433661 HLA-DOBP13765 273 aa4.98□□□□□ -1.61
PTP4A1P3-201ENST00000433661 POLR2CP19387 275 aaPredicted RBP4.98□□□□□ -1.61
PTP4A1P3-201ENST00000433661 MATR3P43243 847 aaKnown RBP eCLIP4.98□□□□□ -1.61
PTP4A1P3-201ENST00000433661 MLLT10P55197 1068 aa4.98□□□□□ -1.61
PTP4A1P3-201ENST00000433661 IRX6P78412 446 aaPredicted RBP4.98□□□□□ -1.61
PTP4A1P3-201ENST00000433661 PLIN5Q00G26 463 aa4.98□□□□□ -1.61
PTP4A1P3-201ENST00000433661 GAGE5Q13069 117 aa4.98□□□□□ -1.61
PTP4A1P3-201ENST00000433661 GAGE6Q13070 117 aa4.98□□□□□ -1.61
PTP4A1P3-201ENST00000433661 TNIP1Q15025 636 aa4.98□□□□□ -1.61
PTP4A1P3-201ENST00000433661 KLHL26Q53HC5 615 aa4.98□□□□□ -1.61
PTP4A1P3-201ENST00000433661 SATL1Q86VE3 508 aa4.98□□□□□ -1.61
PTP4A1P3-201ENST00000433661 TMPRSS12Q86WS5 348 aa4.98□□□□□ -1.61
PTP4A1P3-201ENST00000433661 KMT5CQ86Y97 462 aa4.98□□□□□ -1.61
PTP4A1P3-201ENST00000433661 PPFIBP2Q8ND30 876 aa4.98□□□□□ -1.61
PTP4A1P3-201ENST00000433661 RDM1Q8NG50 284 aa4.98□□□□□ -1.61
PTP4A1P3-201ENST00000433661 SLC20A1Q8WUM9 679 aa4.98□□□□□ -1.61
PTP4A1P3-201ENST00000433661 FIG4Q92562 907 aa4.98□□□□□ -1.61
PTP4A1P3-201ENST00000433661 ABHD8Q96I13 439 aa4.98□□□□□ -1.61
PTP4A1P3-201ENST00000433661 SEPHS2Q99611 448 aa4.98□□□□□ -1.61
PTP4A1P3-201ENST00000433661 SLA2Q9H6Q3 261 aa4.98□□□□□ -1.61
PTP4A1P3-201ENST00000433661 RHCGQ9UBD6 479 aa4.98□□□□□ -1.61
PTP4A1P3-201ENST00000433661 ANAPC5Q9UJX4 755 aa4.98□□□□□ -1.61
PTP4A1P3-201ENST00000433661 VDAC3Q9Y277 283 aa4.98□□□□□ -1.61
PTP4A1P3-201ENST00000433661 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP4.98□□□□□ -1.61
PTP4A1P3-201ENST00000433661 NINLQ9Y2I6 1382 aa4.98□□□□□ -1.61
PTP4A1P3-201ENST00000433661 IQGAP2Q13576 1575 aa4.98□□□□□ -1.61
PTP4A1P3-201ENST00000433661 FLT1P17948 1338 aa4.97□□□□□ -1.61
PTP4A1P3-201ENST00000433661 DNMT1P26358 1616 aaKnown RBP4.97□□□□□ -1.61
PTP4A1P3-201ENST00000433661 CAMTA1Q9Y6Y1 1673 aa4.97□□□□□ -1.61
PTP4A1P3-201ENST00000433661 C5orf60A6NFR6 353 aa4.97□□□□□ -1.61
PTP4A1P3-201ENST00000433661 ANXA2P2A6NMY6 339 aa4.97□□□□□ -1.61
PTP4A1P3-201ENST00000433661 C4orf47A7E2U8 309 aa4.97□□□□□ -1.61
PTP4A1P3-201ENST00000433661 SLCO2B1O94956 709 aa4.97□□□□□ -1.61
PTP4A1P3-201ENST00000433661 CSF2RAP15509 400 aa4.97□□□□□ -1.61
PTP4A1P3-201ENST00000433661 TCEA1P23193 301 aaKnown RBP4.97□□□□□ -1.61
PTP4A1P3-201ENST00000433661 SP100P23497 879 aaPredicted RBP4.97□□□□□ -1.61
PTP4A1P3-201ENST00000433661 EEF1B2P24534 225 aaKnown RBP4.97□□□□□ -1.61
PTP4A1P3-201ENST00000433661 HOXA11P31270 313 aaPredicted RBP4.97□□□□□ -1.61
PTP4A1P3-201ENST00000433661 AHRP35869 848 aa4.97□□□□□ -1.61
PTP4A1P3-201ENST00000433661 CCR10P46092 362 aa4.97□□□□□ -1.61
PTP4A1P3-201ENST00000433661 ARCN1P48444 511 aaKnown RBP4.97□□□□□ -1.61
PTP4A1P3-201ENST00000433661 SLC9A3P48764 834 aa4.97□□□□□ -1.61
PTP4A1P3-201ENST00000433661 ASCL1P50553 236 aa4.97□□□□□ -1.61
PTP4A1P3-201ENST00000433661 NAGLUP54802 743 aa4.97□□□□□ -1.61
PTP4A1P3-201ENST00000433661 HNRNPKP61978 463 aaKnown RBP eCLIP4.97□□□□□ -1.61
PTP4A1P3-201ENST00000433661 RBPJQ06330 500 aa4.97□□□□□ -1.61
PTP4A1P3-201ENST00000433661 SLC20A2Q08357 652 aa4.97□□□□□ -1.61
PTP4A1P3-201ENST00000433661 GTF2H2Q13888 395 aa4.97□□□□□ -1.61
PTP4A1P3-201ENST00000433661 ZNF260Q3ZCT1 412 aa4.97□□□□□ -1.61
PTP4A1P3-201ENST00000433661 C6orf136Q5SQH8 315 aa4.97□□□□□ -1.61
PTP4A1P3-201ENST00000433661 C1QTNF12Q5T7M4 302 aa4.97□□□□□ -1.61
PTP4A1P3-201ENST00000433661 ALS2CLQ60I27 953 aa4.97□□□□□ -1.61
PTP4A1P3-201ENST00000433661 GTF2H2CQ6P1K8 395 aa4.97□□□□□ -1.61
PTP4A1P3-201ENST00000433661 TRAT1Q6PIZ9 186 aa4.97□□□□□ -1.61
PTP4A1P3-201ENST00000433661 RBM23Q86U06 439 aaKnown RBP4.97□□□□□ -1.61
PTP4A1P3-201ENST00000433661 ADHFE1Q8IWW8 467 aa4.97□□□□□ -1.61
PTP4A1P3-201ENST00000433661 MUC20Q8N307 709 aaPredicted RBP4.97□□□□□ -1.61
PTP4A1P3-201ENST00000433661 Q8N9P0 234 aaPredicted RBP4.97□□□□□ -1.61
PTP4A1P3-201ENST00000433661 CAMKVQ8NCB2 501 aa4.97□□□□□ -1.61
PTP4A1P3-201ENST00000433661 KCNH5Q8NCM2 988 aa4.97□□□□□ -1.61
PTP4A1P3-201ENST00000433661 ROBO4Q8WZ75 1007 aa4.97□□□□□ -1.61
PTP4A1P3-201ENST00000433661 LYZL4Q96KX0 146 aa4.97□□□□□ -1.61
PTP4A1P3-201ENST00000433661 MUS81Q96NY9 551 aa4.97□□□□□ -1.61
PTP4A1P3-201ENST00000433661 LMF2Q9BU23 707 aaKnown RBP4.97□□□□□ -1.61
PTP4A1P3-201ENST00000433661 LRMDAQ9H2I8 198 aa4.97□□□□□ -1.61
PTP4A1P3-201ENST00000433661 DPAGT1Q9H3H5 408 aa4.97□□□□□ -1.61
PTP4A1P3-201ENST00000433661 ARGLU1Q9NWB6 273 aaPredicted RBP4.97□□□□□ -1.61
PTP4A1P3-201ENST00000433661 STK26Q9P289 416 aa4.97□□□□□ -1.61
PTP4A1P3-201ENST00000433661 COL16A1Q07092 1604 aaPredicted RBP4.97□□□□□ -1.61
PTP4A1P3-201ENST00000433661 REREQ9P2R6 1566 aa4.96□□□□□ -1.62
PTP4A1P3-201ENST00000433661 MED14O60244 1454 aa4.96□□□□□ -1.62
PTP4A1P3-201ENST00000433661 A0A0G2JNG1 304 aa4.96□□□□□ -1.62
PTP4A1P3-201ENST00000433661 ELOVL7A1L3X0 281 aa4.96□□□□□ -1.62
PTP4A1P3-201ENST00000433661 TSPY2A6NKD2 308 aa4.96□□□□□ -1.62
PTP4A1P3-201ENST00000433661 TRIM77I1YAP6 450 aa4.96□□□□□ -1.62
PTP4A1P3-201ENST00000433661 EIF3DO15371 548 aaKnown RBP eCLIP4.96□□□□□ -1.62
PTP4A1P3-201ENST00000433661 SMAD6O43541 496 aaKnown RBP4.96□□□□□ -1.62
PTP4A1P3-201ENST00000433661 SYNCRIPO60506 623 aaKnown RBP4.96□□□□□ -1.62
PTP4A1P3-201ENST00000433661 WDR1O75083 606 aa4.96□□□□□ -1.62
PTP4A1P3-201ENST00000433661 CELF2O95319 508 aaKnown RBP4.96□□□□□ -1.62
PTP4A1P3-201ENST00000433661 GCNT3O95395 438 aa4.96□□□□□ -1.62
PTP4A1P3-201ENST00000433661 PPP1R3DO95685 299 aa4.96□□□□□ -1.62
PTP4A1P3-201ENST00000433661 BMP15O95972 392 aa4.96□□□□□ -1.62
PTP4A1P3-201ENST00000433661 HSP90AB1P08238 724 aaKnown RBP4.96□□□□□ -1.62
PTP4A1P3-201ENST00000433661 TSPY3P0CV98 308 aa4.96□□□□□ -1.62
PTP4A1P3-201ENST00000433661 TSPY8P0CW00 308 aa4.96□□□□□ -1.62
PTP4A1P3-201ENST00000433661 FDPSP14324 419 aaKnown RBP4.96□□□□□ -1.62
PTP4A1P3-201ENST00000433661 PSMA3P25788 255 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms