RNA–Protein interactions for RNA: ENST00000433260.1

HMGB3P24-201, Transcript of high mobility group box 3 pseudogene 24, humanhuman

BASIC

Gene HMGB3P24, Length 622 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P24-201ENST00000433260 UBXN7O94888 489 aa5.63□□□□□ -1.51
HMGB3P24-201ENST00000433260 HAUS5O94927 633 aa5.63□□□□□ -1.51
HMGB3P24-201ENST00000433260 AP2A2O94973 939 aa5.63□□□□□ -1.51
HMGB3P24-201ENST00000433260 SLC35G4P0C7Q5 338 aa5.63□□□□□ -1.51
HMGB3P24-201ENST00000433260 JMJD7P0C870 316 aa5.63□□□□□ -1.51
HMGB3P24-201ENST00000433260 ERVK-10P10266 1014 aa5.63□□□□□ -1.51
HMGB3P24-201ENST00000433260 MTHFD1P11586 935 aaKnown RBP5.63□□□□□ -1.51
HMGB3P24-201ENST00000433260 MLNP12872 115 aa5.63□□□□□ -1.51
HMGB3P24-201ENST00000433260 CCL4P13236 92 aa5.63□□□□□ -1.51
HMGB3P24-201ENST00000433260 PAMP19021 973 aa5.63□□□□□ -1.51
HMGB3P24-201ENST00000433260 CHRM3P20309 590 aa5.63□□□□□ -1.51
HMGB3P24-201ENST00000433260 PSMA3P25788 255 aa5.63□□□□□ -1.51
HMGB3P24-201ENST00000433260 CCR7P32248 378 aa5.63□□□□□ -1.51
HMGB3P24-201ENST00000433260 CSF2RBP32927 897 aa5.63□□□□□ -1.51
HMGB3P24-201ENST00000433260 PPARGP37231 505 aaPredicted RBP5.63□□□□□ -1.51
HMGB3P24-201ENST00000433260 EIF2S3P41091 472 aaKnown RBP5.63□□□□□ -1.51
HMGB3P24-201ENST00000433260 ELK3P41970 407 aa5.63□□□□□ -1.51
HMGB3P24-201ENST00000433260 MAGEA6P43360 314 aa5.63□□□□□ -1.51
HMGB3P24-201ENST00000433260 RPL21P46778 160 aaKnown RBP5.63□□□□□ -1.51
HMGB3P24-201ENST00000433260 LEPRP48357 1165 aaKnown RBP5.63□□□□□ -1.51
HMGB3P24-201ENST00000433260 ARCN1P48444 511 aaKnown RBP5.63□□□□□ -1.51
HMGB3P24-201ENST00000433260 LSSP48449 732 aa5.63□□□□□ -1.51
HMGB3P24-201ENST00000433260 CARSP49589 748 aaKnown RBP5.63□□□□□ -1.51
HMGB3P24-201ENST00000433260 PRLHRP49683 370 aa5.63□□□□□ -1.51
HMGB3P24-201ENST00000433260 UBE2IP63279 158 aaKnown RBP5.63□□□□□ -1.51
HMGB3P24-201ENST00000433260 ZFP36L1Q07352 338 aaKnown RBP5.63□□□□□ -1.51
HMGB3P24-201ENST00000433260 DMPKQ09013 629 aa5.63□□□□□ -1.51
HMGB3P24-201ENST00000433260 HSPA14Q0VDF9 509 aa5.63□□□□□ -1.51
HMGB3P24-201ENST00000433260 THOC5Q13769 683 aaKnown RBP5.63□□□□□ -1.51
HMGB3P24-201ENST00000433260 ITIH4Q14624 930 aa5.63□□□□□ -1.51
HMGB3P24-201ENST00000433260 NR1D2Q14995 579 aa5.63□□□□□ -1.51
HMGB3P24-201ENST00000433260 RTP5Q14D33 572 aa5.63□□□□□ -1.51
HMGB3P24-201ENST00000433260 PLCL1Q15111 1095 aa5.63□□□□□ -1.51
HMGB3P24-201ENST00000433260 TRADDQ15628 312 aa5.63□□□□□ -1.51
HMGB3P24-201ENST00000433260 ANKRD20A4Q4UJ75 823 aa5.63□□□□□ -1.51
HMGB3P24-201ENST00000433260 BCL7AQ4VC05 210 aa5.63□□□□□ -1.51
HMGB3P24-201ENST00000433260 SYTL3Q4VX76 610 aa5.63□□□□□ -1.51
HMGB3P24-201ENST00000433260 AGAP9Q5VTM2 703 aa5.63□□□□□ -1.51
HMGB3P24-201ENST00000433260 CAPRIN2Q6IMN6 1127 aaKnown RBP5.63□□□□□ -1.51
HMGB3P24-201ENST00000433260 HIBCHQ6NVY1 386 aaPredicted RBP5.63□□□□□ -1.51
HMGB3P24-201ENST00000433260 NEPROQ6NW34 567 aa5.63□□□□□ -1.51
HMGB3P24-201ENST00000433260 IRGCQ6NXR0 463 aa5.63□□□□□ -1.51
HMGB3P24-201ENST00000433260 XKR5Q6UX68 686 aa5.63□□□□□ -1.51
HMGB3P24-201ENST00000433260 WASH2PQ6VEQ5 465 aa5.63□□□□□ -1.51
HMGB3P24-201ENST00000433260 IGDCC3Q8IVU1 814 aa5.63□□□□□ -1.51
HMGB3P24-201ENST00000433260 LSMEM2Q8N112 164 aa5.63□□□□□ -1.51
HMGB3P24-201ENST00000433260 LMNTD1Q8N9Z9 388 aa5.63□□□□□ -1.51
HMGB3P24-201ENST00000433260 GPR150Q8NGU9 434 aa5.63□□□□□ -1.51
HMGB3P24-201ENST00000433260 RSC1A1Q92681 617 aa5.63□□□□□ -1.51
HMGB3P24-201ENST00000433260 SLCO2A1Q92959 643 aa5.63□□□□□ -1.51
HMGB3P24-201ENST00000433260 USP7Q93009 1102 aa5.63□□□□□ -1.51
HMGB3P24-201ENST00000433260 LINC00615Q96LM1 132 aaPredicted RBP5.63□□□□□ -1.51
HMGB3P24-201ENST00000433260 RMDN2Q96LZ7 410 aa5.63□□□□□ -1.51
HMGB3P24-201ENST00000433260 SLC46A1Q96NT5 459 aa5.63□□□□□ -1.51
HMGB3P24-201ENST00000433260 TGM7Q96PF1 710 aa5.63□□□□□ -1.51
HMGB3P24-201ENST00000433260 CMKLR1Q99788 373 aa5.63□□□□□ -1.51
HMGB3P24-201ENST00000433260 CTRCQ99895 268 aa5.63□□□□□ -1.51
HMGB3P24-201ENST00000433260 XKR8Q9H6D3 395 aa5.63□□□□□ -1.51
HMGB3P24-201ENST00000433260 COG4Q9H9E3 785 aa5.63□□□□□ -1.51
HMGB3P24-201ENST00000433260 VPS37BQ9H9H4 285 aa5.63□□□□□ -1.51
HMGB3P24-201ENST00000433260 GPAMQ9HCL2 828 aa5.63□□□□□ -1.51
HMGB3P24-201ENST00000433260 XAB2Q9HCS7 855 aaKnown RBP5.63□□□□□ -1.51
HMGB3P24-201ENST00000433260 WASH6PQ9NQA3 447 aa5.63□□□□□ -1.51
HMGB3P24-201ENST00000433260 IARS2Q9NSE4 1012 aaKnown RBP5.63□□□□□ -1.51
HMGB3P24-201ENST00000433260 C20orf96Q9NUD7 363 aaPredicted RBP5.63□□□□□ -1.51
HMGB3P24-201ENST00000433260 OCIAD1Q9NX40 245 aa5.63□□□□□ -1.51
HMGB3P24-201ENST00000433260 OGFRQ9NZT2 677 aa5.63□□□□□ -1.51
HMGB3P24-201ENST00000433260 GALPQ9UBC7 116 aa5.63□□□□□ -1.51
HMGB3P24-201ENST00000433260 RNF14Q9UBS8 474 aa5.63□□□□□ -1.51
HMGB3P24-201ENST00000433260 CIDEBQ9UHD4 219 aa5.63□□□□□ -1.51
HMGB3P24-201ENST00000433260 TDRKHQ9Y2W6 561 aaKnown RBP5.63□□□□□ -1.51
HMGB3P24-201ENST00000433260 LOXL2Q9Y4K0 774 aa5.63□□□□□ -1.51
HMGB3P24-201ENST00000433260 FAM169AQ9Y6X4 670 aa5.63□□□□□ -1.51
HMGB3P24-201ENST00000433260 COLEC10Q9Y6Z7 277 aa5.63□□□□□ -1.51
HMGB3P24-201ENST00000433260 SPTBN4Q9H254 2564 aa5.63□□□□□ -1.51
HMGB3P24-201ENST00000433260 GOLGA4Q13439 2230 aaKnown RBP5.62□□□□□ -1.51
HMGB3P24-201ENST00000433260 ZCWPW2A0A1B0GU75 182 aa5.62□□□□□ -1.51
HMGB3P24-201ENST00000433260 FAM237BA0A1B0GVD1 139 aa5.62□□□□□ -1.51
HMGB3P24-201ENST00000433260 SLC35F4A4IF30 521 aa5.62□□□□□ -1.51
HMGB3P24-201ENST00000433260 OR6C74A6NCV1 312 aa5.62□□□□□ -1.51
HMGB3P24-201ENST00000433260 EFCAB7A8K855 629 aa5.62□□□□□ -1.51
HMGB3P24-201ENST00000433260 BTN3A3O00478 584 aa5.62□□□□□ -1.51
HMGB3P24-201ENST00000433260 LIN7AO14910 233 aaPredicted RBP5.62□□□□□ -1.51
HMGB3P24-201ENST00000433260 PLD2O14939 933 aa5.62□□□□□ -1.51
HMGB3P24-201ENST00000433260 RAD51CO43502 376 aa5.62□□□□□ -1.51
HMGB3P24-201ENST00000433260 DUX1O43812 170 aa5.62□□□□□ -1.51
HMGB3P24-201ENST00000433260 NIPSNAP2O75323 286 aa5.62□□□□□ -1.51
HMGB3P24-201ENST00000433260 RASSF9O75901 435 aa5.62□□□□□ -1.51
HMGB3P24-201ENST00000433260 FTH1P02794 183 aa5.62□□□□□ -1.51
HMGB3P24-201ENST00000433260 FGF3P11487 239 aaPredicted RBP5.62□□□□□ -1.51
HMGB3P24-201ENST00000433260 SNRPBP14678 240 aaKnown RBP5.62□□□□□ -1.51
HMGB3P24-201ENST00000433260 POLR2CP19387 275 aaPredicted RBP5.62□□□□□ -1.51
HMGB3P24-201ENST00000433260 ARNTP27540 789 aa5.62□□□□□ -1.51
HMGB3P24-201ENST00000433260 ITPKBP27987 946 aa5.62□□□□□ -1.51
HMGB3P24-201ENST00000433260 SLC5A2P31639 672 aa5.62□□□□□ -1.51
HMGB3P24-201ENST00000433260 CCKBRP32239 447 aa5.62□□□□□ -1.51
HMGB3P24-201ENST00000433260 CSTF2P33240 577 aaKnown RBP eCLIP5.62□□□□□ -1.51
HMGB3P24-201ENST00000433260 ETV5P41161 510 aa5.62□□□□□ -1.51
HMGB3P24-201ENST00000433260 ABCG1P45844 678 aa5.62□□□□□ -1.51
HMGB3P24-201ENST00000433260 SERPINB4P48594 390 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms