RNA–Protein interactions for RNA: ENST00000431461.1

CDC40-204, Transcript of cell division cycle 40, humanhuman

TSL 3

Gene CDC40, Length 400 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-204ENST00000431461 FNBP1Q96RU3 617 aa2.03□□□□□ -2.08
CDC40-204ENST00000431461 PAFAH2Q99487 392 aa2.03□□□□□ -2.08
CDC40-204ENST00000431461 PKP4Q99569 1192 aa2.03□□□□□ -2.08
CDC40-204ENST00000431461 SRSF8Q9BRL6 282 aaKnown RBP2.03□□□□□ -2.08
CDC40-204ENST00000431461 BTBD10Q9BSF8 475 aa2.03□□□□□ -2.08
CDC40-204ENST00000431461 POLR3CQ9BUI4 534 aaPredicted RBP2.03□□□□□ -2.08
CDC40-204ENST00000431461 SLC25A23Q9BV35 468 aa2.03□□□□□ -2.08
CDC40-204ENST00000431461 MXD3Q9BW11 206 aa2.03□□□□□ -2.08
CDC40-204ENST00000431461 CCDC106Q9BWC9 280 aa2.03□□□□□ -2.08
CDC40-204ENST00000431461 UPF2Q9HAU5 1272 aaKnown RBP2.03□□□□□ -2.08
CDC40-204ENST00000431461 APOBEC3GQ9HC16 384 aaKnown RBP2.03□□□□□ -2.08
CDC40-204ENST00000431461 SDF2L1Q9HCN8 221 aa2.03□□□□□ -2.08
CDC40-204ENST00000431461 ANKEF1Q9NU02 776 aa2.03□□□□□ -2.08
CDC40-204ENST00000431461 PAG1Q9NWQ8 432 aa2.03□□□□□ -2.08
CDC40-204ENST00000431461 MIOSQ9NXC5 875 aa2.03□□□□□ -2.08
CDC40-204ENST00000431461 CLIC5Q9NZA1 410 aa2.03□□□□□ -2.08
CDC40-204ENST00000431461 COQ3Q9NZJ6 369 aa2.03□□□□□ -2.08
CDC40-204ENST00000431461 BCCIPQ9P287 314 aaKnown RBP eCLIP2.03□□□□□ -2.08
CDC40-204ENST00000431461 PADI3Q9ULW8 664 aa2.03□□□□□ -2.08
CDC40-204ENST00000431461 PCDHGB4Q9UN71 923 aa2.03□□□□□ -2.08
CDC40-204ENST00000431461 PTRH2Q9Y3E5 179 aaKnown RBP2.03□□□□□ -2.08
CDC40-204ENST00000431461 OR2W1Q9Y3N9 320 aa2.03□□□□□ -2.08
CDC40-204ENST00000431461 A0A1W2PRB8 838 aa2.02□□□□□ -2.09
CDC40-204ENST00000431461 CTAGE9A4FU28 777 aa2.02□□□□□ -2.09
CDC40-204ENST00000431461 PRAC2D3DTV9 90 aa2.02□□□□□ -2.09
CDC40-204ENST00000431461 CCDC188H7C350 402 aa2.02□□□□□ -2.09
CDC40-204ENST00000431461 O00370 1275 aa2.02□□□□□ -2.09
CDC40-204ENST00000431461 WDR46O15213 610 aaKnown RBP2.02□□□□□ -2.09
CDC40-204ENST00000431461 PRKNO60260 465 aaPredicted RBP2.02□□□□□ -2.09
CDC40-204ENST00000431461 EIF5BO60841 1220 aaKnown RBP2.02□□□□□ -2.09
CDC40-204ENST00000431461 TBCAO75347 108 aaKnown RBP2.02□□□□□ -2.09
CDC40-204ENST00000431461 PGM3O95394 542 aa2.02□□□□□ -2.09
CDC40-204ENST00000431461 TRUB2O95900 331 aaKnown RBP2.02□□□□□ -2.09
CDC40-204ENST00000431461 PAK4O96013 591 aaPredicted RBP2.02□□□□□ -2.09
CDC40-204ENST00000431461 CRYAAP02489 173 aa2.02□□□□□ -2.09
CDC40-204ENST00000431461 OR2T7P0C7T2 308 aa2.02□□□□□ -2.09
CDC40-204ENST00000431461 DANCRP0C864 163 aa2.02□□□□□ -2.09
CDC40-204ENST00000431461 CTAGE8P0CG41 777 aa2.02□□□□□ -2.09
CDC40-204ENST00000431461 SAGP10523 405 aaPredicted RBP2.02□□□□□ -2.09
CDC40-204ENST00000431461 HLA-DOBP13765 273 aa2.02□□□□□ -2.09
CDC40-204ENST00000431461 AKR1B1P15121 316 aa2.02□□□□□ -2.09
CDC40-204ENST00000431461 ERCC2P18074 760 aa2.02□□□□□ -2.09
CDC40-204ENST00000431461 CA6P23280 308 aa2.02□□□□□ -2.09
CDC40-204ENST00000431461 PSMA3P25788 255 aa2.02□□□□□ -2.09
CDC40-204ENST00000431461 NMBRP28336 390 aa2.02□□□□□ -2.09
CDC40-204ENST00000431461 GLIPR1P48060 266 aa2.02□□□□□ -2.09
CDC40-204ENST00000431461 MMP15P51511 669 aa2.02□□□□□ -2.09
CDC40-204ENST00000431461 CCR3P51677 355 aa2.02□□□□□ -2.09
CDC40-204ENST00000431461 ZNF132P52740 706 aa2.02□□□□□ -2.09
CDC40-204ENST00000431461 LIMK1P53667 647 aa2.02□□□□□ -2.09
CDC40-204ENST00000431461 KCNJ10P78508 379 aa2.02□□□□□ -2.09
CDC40-204ENST00000431461 RPL24P83731 157 aaKnown RBP2.02□□□□□ -2.09
CDC40-204ENST00000431461 RASA2Q15283 850 aa2.02□□□□□ -2.09
CDC40-204ENST00000431461 KYNUQ16719 465 aa2.02□□□□□ -2.09
CDC40-204ENST00000431461 CCDC96Q2M329 555 aa2.02□□□□□ -2.09
CDC40-204ENST00000431461 IGSF11Q5DX21 431 aa2.02□□□□□ -2.09
CDC40-204ENST00000431461 ERMARDQ5T6L9 678 aa2.02□□□□□ -2.09
CDC40-204ENST00000431461 KRT39Q6A163 491 aa2.02□□□□□ -2.09
CDC40-204ENST00000431461 FAM171BQ6P995 826 aa2.02□□□□□ -2.09
CDC40-204ENST00000431461 ZNF852Q6ZMS4 543 aa2.02□□□□□ -2.09
CDC40-204ENST00000431461 ZNF554Q86TJ5 538 aa2.02□□□□□ -2.09
CDC40-204ENST00000431461 SATL1Q86VE3 508 aa2.02□□□□□ -2.09
CDC40-204ENST00000431461 CEP97Q8IW35 865 aa2.02□□□□□ -2.09
CDC40-204ENST00000431461 DCUN1D3Q8IWE4 304 aa2.02□□□□□ -2.09
CDC40-204ENST00000431461 CTAGE4Q8IX94 777 aa2.02□□□□□ -2.09
CDC40-204ENST00000431461 ODF3L1Q8IXM7 274 aa2.02□□□□□ -2.09
CDC40-204ENST00000431461 ZNF611Q8N823 705 aa2.02□□□□□ -2.09
CDC40-204ENST00000431461 ZNF441Q8N8Z8 693 aa2.02□□□□□ -2.09
CDC40-204ENST00000431461 RBM15BQ8NDT2 890 aaKnown RBP2.02□□□□□ -2.09
CDC40-204ENST00000431461 CTCFLQ8NI51 663 aaPredicted RBP2.02□□□□□ -2.09
CDC40-204ENST00000431461 GRAPLQ8TC17 118 aaPredicted RBP2.02□□□□□ -2.09
CDC40-204ENST00000431461 TEKT4Q8WW24 435 aa2.02□□□□□ -2.09
CDC40-204ENST00000431461 SLC44A1Q8WWI5 657 aa2.02□□□□□ -2.09
CDC40-204ENST00000431461 ERP27Q96DN0 273 aa2.02□□□□□ -2.09
CDC40-204ENST00000431461 STAMBPL1Q96FJ0 436 aa2.02□□□□□ -2.09
CDC40-204ENST00000431461 NSL1Q96IY1 281 aa2.02□□□□□ -2.09
CDC40-204ENST00000431461 FAM81BQ96LP2 452 aa2.02□□□□□ -2.09
CDC40-204ENST00000431461 SFXN2Q96NB2 322 aa2.02□□□□□ -2.09
CDC40-204ENST00000431461 ZNF583Q96ND8 569 aa2.02□□□□□ -2.09
CDC40-204ENST00000431461 LRRC3BQ96PB8 259 aa2.02□□□□□ -2.09
CDC40-204ENST00000431461 SERINC2Q96SA4 455 aa2.02□□□□□ -2.09
CDC40-204ENST00000431461 GFI1Q99684 422 aa2.02□□□□□ -2.09
CDC40-204ENST00000431461 AP1M1Q9BXS5 423 aa2.02□□□□□ -2.09
CDC40-204ENST00000431461 EDEM3Q9BZQ6 932 aa2.02□□□□□ -2.09
CDC40-204ENST00000431461 EGLN1Q9GZT9 426 aa2.02□□□□□ -2.09
CDC40-204ENST00000431461 MMP28Q9H239 520 aa2.02□□□□□ -2.09
CDC40-204ENST00000431461 NOL11Q9H8H0 719 aaKnown RBP2.02□□□□□ -2.09
CDC40-204ENST00000431461 ZNF334Q9HCZ1 680 aaPredicted RBP2.02□□□□□ -2.09
CDC40-204ENST00000431461 EQTNQ9NQ60 294 aa2.02□□□□□ -2.09
CDC40-204ENST00000431461 SLC38A7Q9NVC3 462 aa2.02□□□□□ -2.09
CDC40-204ENST00000431461 C2orf42Q9NWW7 574 aa2.02□□□□□ -2.09
CDC40-204ENST00000431461 SLC24A2Q9UI40 661 aa2.02□□□□□ -2.09
CDC40-204ENST00000431461 RALYQ9UKM9 306 aaKnown RBP2.02□□□□□ -2.09
CDC40-204ENST00000431461 SLC7A7Q9UM01 511 aa2.02□□□□□ -2.09
CDC40-204ENST00000431461 TRPV2Q9Y5S1 764 aa2.02□□□□□ -2.09
CDC40-204ENST00000431461 MAGED1Q9Y5V3 778 aaPredicted RBP2.02□□□□□ -2.09
CDC40-204ENST00000431461 EDDM13A0A1B0GTR0 161 aa2.01□□□□□ -2.09
CDC40-204ENST00000431461 ANKUB1A6NFN9 424 aa2.01□□□□□ -2.09
CDC40-204ENST00000431461 TSPY2A6NKD2 308 aa2.01□□□□□ -2.09
CDC40-204ENST00000431461 A8MXE2 369 aa2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms