RNA–Protein interactions for RNA: ENST00000430858.1

HDAC6-207, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 618 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-207ENST00000430858 BRD3Q15059 726 aa9.55□□□□□ -0.88
HDAC6-207ENST00000430858 PPP1R7Q15435 360 aa9.55□□□□□ -0.88
HDAC6-207ENST00000430858 RNF187Q5TA31 235 aaPredicted RBP9.55□□□□□ -0.88
HDAC6-207ENST00000430858 PTRHD1Q6GMV3 140 aaKnown RBP9.55□□□□□ -0.88
HDAC6-207ENST00000430858 KIAA0930Q6ICG6 404 aaPredicted RBP9.55□□□□□ -0.88
HDAC6-207ENST00000430858 CASC4Q6P4E1 433 aa9.55□□□□□ -0.88
HDAC6-207ENST00000430858 SDCCAG8Q86SQ7 713 aaPredicted RBP9.55□□□□□ -0.88
HDAC6-207ENST00000430858 LDB1Q86U70 411 aaPredicted RBP9.55□□□□□ -0.88
HDAC6-207ENST00000430858 CAND1Q86VP6 1230 aaKnown RBP9.55□□□□□ -0.88
HDAC6-207ENST00000430858 PPIL6Q8IXY8 311 aa9.55□□□□□ -0.88
HDAC6-207ENST00000430858 TBC1D21Q8IYX1 336 aa9.55□□□□□ -0.88
HDAC6-207ENST00000430858 NLGN4XQ8N0W4 816 aa9.55□□□□□ -0.88
HDAC6-207ENST00000430858 NAT8LQ8N9F0 302 aa9.55□□□□□ -0.88
HDAC6-207ENST00000430858 PHC3Q8NDX5 983 aa9.55□□□□□ -0.88
HDAC6-207ENST00000430858 NLGN4YQ8NFZ3 816 aaPredicted RBP9.55□□□□□ -0.88
HDAC6-207ENST00000430858 OR52E1Q8NGJ3 308 aa9.55□□□□□ -0.88
HDAC6-207ENST00000430858 ASZ1Q8WWH4 475 aa9.55□□□□□ -0.88
HDAC6-207ENST00000430858 SLCO2A1Q92959 643 aa9.55□□□□□ -0.88
HDAC6-207ENST00000430858 NKD1Q969G9 470 aa9.55□□□□□ -0.88
HDAC6-207ENST00000430858 RUNDC3BQ96NL0 473 aa9.55□□□□□ -0.88
HDAC6-207ENST00000430858 SERPINB12Q96P63 405 aa9.55□□□□□ -0.88
HDAC6-207ENST00000430858 PANX3Q96QZ0 392 aa9.55□□□□□ -0.88
HDAC6-207ENST00000430858 OR6C1Q96RD1 312 aa9.55□□□□□ -0.88
HDAC6-207ENST00000430858 MAP3K3Q99759 626 aa9.55□□□□□ -0.88
HDAC6-207ENST00000430858 CTRCQ99895 268 aa9.55□□□□□ -0.88
HDAC6-207ENST00000430858 SPRY4Q9C004 299 aa9.55□□□□□ -0.88
HDAC6-207ENST00000430858 SRMSQ9H3Y6 488 aa9.55□□□□□ -0.88
HDAC6-207ENST00000430858 APMAPQ9HDC9 416 aa9.55□□□□□ -0.88
HDAC6-207ENST00000430858 MARCH4Q9P2E8 410 aaPredicted RBP9.55□□□□□ -0.88
HDAC6-207ENST00000430858 PCYOX1Q9UHG3 505 aa9.55□□□□□ -0.88
HDAC6-207ENST00000430858 POLG2Q9UHN1 485 aa9.55□□□□□ -0.88
HDAC6-207ENST00000430858 GNPTGQ9UJJ9 305 aa9.55□□□□□ -0.88
HDAC6-207ENST00000430858 PILRAQ9UKJ1 303 aa9.55□□□□□ -0.88
HDAC6-207ENST00000430858 ASF1AQ9Y294 204 aa9.55□□□□□ -0.88
HDAC6-207ENST00000430858 SAR1BQ9Y6B6 198 aa9.55□□□□□ -0.88
HDAC6-207ENST00000430858 ZZEF1O43149 2961 aa9.55□□□□□ -0.88
HDAC6-207ENST00000430858 IGHV5-51A0A0C4DH38 117 aa9.54□□□□□ -0.88
HDAC6-207ENST00000430858 FAM237BA0A1B0GVD1 139 aa9.54□□□□□ -0.88
HDAC6-207ENST00000430858 IQCF5A8MTL0 148 aa9.54□□□□□ -0.88
HDAC6-207ENST00000430858 BHMG1C9JSJ3 638 aaPredicted RBP9.54□□□□□ -0.88
HDAC6-207ENST00000430858 GOLGA8MH3BSY2 632 aa9.54□□□□□ -0.88
HDAC6-207ENST00000430858 KPNA5O15131 536 aa9.54□□□□□ -0.88
HDAC6-207ENST00000430858 EFSO43281 561 aa9.54□□□□□ -0.88
HDAC6-207ENST00000430858 KDM1AO60341 852 aa9.54□□□□□ -0.88
HDAC6-207ENST00000430858 RAD1O60671 282 aa9.54□□□□□ -0.88
HDAC6-207ENST00000430858 GPC4O75487 556 aa9.54□□□□□ -0.88
HDAC6-207ENST00000430858 STK17BO94768 372 aa9.54□□□□□ -0.88
HDAC6-207ENST00000430858 ZBTB11O95625 1053 aaPredicted RBP9.54□□□□□ -0.88
HDAC6-207ENST00000430858 APOA4P06727 396 aa9.54□□□□□ -0.88
HDAC6-207ENST00000430858 FGF5P12034 268 aa9.54□□□□□ -0.88
HDAC6-207ENST00000430858 ITGB6P18564 788 aa9.54□□□□□ -0.88
HDAC6-207ENST00000430858 POLR2CP19387 275 aaPredicted RBP9.54□□□□□ -0.88
HDAC6-207ENST00000430858 OGNP20774 298 aaKnown RBP9.54□□□□□ -0.88
HDAC6-207ENST00000430858 MAP4P27816 1152 aaKnown RBP9.54□□□□□ -0.88
HDAC6-207ENST00000430858 MAGEA3P43357 314 aa9.54□□□□□ -0.88
HDAC6-207ENST00000430858 ARCN1P48444 511 aaKnown RBP9.54□□□□□ -0.88
HDAC6-207ENST00000430858 ARL4DP49703 201 aa9.54□□□□□ -0.88
HDAC6-207ENST00000430858 KPNA2P52292 529 aaKnown RBP9.54□□□□□ -0.88
HDAC6-207ENST00000430858 ADARP55265 1226 aaKnown RBP9.54□□□□□ -0.88
HDAC6-207ENST00000430858 SH3BP2P78314 561 aa9.54□□□□□ -0.88
HDAC6-207ENST00000430858 HSD11B2P80365 405 aa9.54□□□□□ -0.88
HDAC6-207ENST00000430858 ACY1Q03154 408 aa9.54□□□□□ -0.88
HDAC6-207ENST00000430858 HSPA14Q0VDF9 509 aa9.54□□□□□ -0.88
HDAC6-207ENST00000430858 PRKG2Q13237 762 aa9.54□□□□□ -0.88
HDAC6-207ENST00000430858 MAP7Q14244 749 aa9.54□□□□□ -0.88
HDAC6-207ENST00000430858 TMED2Q15363 201 aa9.54□□□□□ -0.88
HDAC6-207ENST00000430858 TYSND1Q2T9J0 566 aa9.54□□□□□ -0.88
HDAC6-207ENST00000430858 DNAJC21Q5F1R6 531 aaKnown RBP9.54□□□□□ -0.88
HDAC6-207ENST00000430858 RNASEH2BQ5TBB1 312 aaKnown RBP9.54□□□□□ -0.88
HDAC6-207ENST00000430858 CES3Q6UWW8 571 aa9.54□□□□□ -0.88
HDAC6-207ENST00000430858 NAPRTQ6XQN6 538 aa9.54□□□□□ -0.88
HDAC6-207ENST00000430858 SYDE1Q6ZW31 735 aaPredicted RBP9.54□□□□□ -0.88
HDAC6-207ENST00000430858 PCGF5Q86SE9 256 aa9.54□□□□□ -0.88
HDAC6-207ENST00000430858 TMEM135Q86UB9 458 aa9.54□□□□□ -0.88
HDAC6-207ENST00000430858 BPHLQ86WA6 291 aaPredicted RBP9.54□□□□□ -0.88
HDAC6-207ENST00000430858 AMIGO1Q86WK6 493 aa9.54□□□□□ -0.88
HDAC6-207ENST00000430858 PPP1R3BQ86XI6 285 aa9.54□□□□□ -0.88
HDAC6-207ENST00000430858 CREG2Q8IUH2 290 aa9.54□□□□□ -0.88
HDAC6-207ENST00000430858 SLC22A15Q8IZD6 547 aa9.54□□□□□ -0.88
HDAC6-207ENST00000430858 CACNA2D3Q8IZS8 1091 aa9.54□□□□□ -0.88
HDAC6-207ENST00000430858 OTUD6BQ8N6M0 293 aa9.54□□□□□ -0.88
HDAC6-207ENST00000430858 IL22RA1Q8N6P7 574 aa9.54□□□□□ -0.88
HDAC6-207ENST00000430858 ZSCAN1Q8NBB4 408 aa9.54□□□□□ -0.88
HDAC6-207ENST00000430858 SIDT2Q8NBJ9 832 aaKnown RBP9.54□□□□□ -0.88
HDAC6-207ENST00000430858 LSM14AQ8ND56 463 aaKnown RBP9.54□□□□□ -0.88
HDAC6-207ENST00000430858 OR5K2Q8NHB8 316 aa9.54□□□□□ -0.88
HDAC6-207ENST00000430858 TCF12Q99081 682 aa9.54□□□□□ -0.88
HDAC6-207ENST00000430858 HGH1Q9BTY7 390 aa9.54□□□□□ -0.88
HDAC6-207ENST00000430858 DDX47Q9H0S4 455 aaKnown RBP9.54□□□□□ -0.88
HDAC6-207ENST00000430858 P2RY12Q9H244 342 aa9.54□□□□□ -0.88
HDAC6-207ENST00000430858 TRIT1Q9H3H1 467 aaKnown RBP9.54□□□□□ -0.88
HDAC6-207ENST00000430858 PDE7BQ9NP56 450 aa9.54□□□□□ -0.88
HDAC6-207ENST00000430858 C1GALT1Q9NS00 363 aa9.54□□□□□ -0.88
HDAC6-207ENST00000430858 RNF14Q9UBS8 474 aa9.54□□□□□ -0.88
HDAC6-207ENST00000430858 ASIC3Q9UHC3 531 aa9.54□□□□□ -0.88
HDAC6-207ENST00000430858 POMT2Q9UKY4 750 aa9.54□□□□□ -0.88
HDAC6-207ENST00000430858 VPS9D1Q9Y2B5 631 aa9.54□□□□□ -0.88
HDAC6-207ENST00000430858 TMEM184BQ9Y519 407 aaPredicted RBP9.54□□□□□ -0.88
HDAC6-207ENST00000430858 AHCTF1Q8WYP5 2266 aa9.53□□□□□ -0.88
HDAC6-207ENST00000430858 PTPRQQ9UMZ3 2332 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms