RNA–Protein interactions for RNA: ENST00000430682.5

SMPD4-204, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 820 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-204ENST00000430682 SLC9B1P1A6NJY1 282 aa12.16□□□□□ -0.46
SMPD4-204ENST00000430682 IQCF5A8MTL0 148 aa12.16□□□□□ -0.46
SMPD4-204ENST00000430682 AP2A2O94973 939 aa12.16□□□□□ -0.46
SMPD4-204ENST00000430682 ITGB2P05107 769 aa12.16□□□□□ -0.46
SMPD4-204ENST00000430682 FURINP09958 794 aa12.16□□□□□ -0.46
SMPD4-204ENST00000430682 PVRP15151 417 aa12.16□□□□□ -0.46
SMPD4-204ENST00000430682 NMBRP28336 390 aa12.16□□□□□ -0.46
SMPD4-204ENST00000430682 OAS2P29728 719 aaKnown RBP12.16□□□□□ -0.46
SMPD4-204ENST00000430682 NSG1P42857 185 aa12.16□□□□□ -0.46
SMPD4-204ENST00000430682 SESN2P58004 480 aaPredicted RBP12.16□□□□□ -0.46
SMPD4-204ENST00000430682 NFKB2Q00653 900 aa12.16□□□□□ -0.46
SMPD4-204ENST00000430682 ABHD18Q0P651 414 aa12.16□□□□□ -0.46
SMPD4-204ENST00000430682 ITIH4Q14624 930 aa12.16□□□□□ -0.46
SMPD4-204ENST00000430682 IL11RAQ14626 422 aa12.16□□□□□ -0.46
SMPD4-204ENST00000430682 TRIP13Q15645 432 aaPredicted RBP12.16□□□□□ -0.46
SMPD4-204ENST00000430682 PRAMEF17Q5VTA0 474 aa12.16□□□□□ -0.46
SMPD4-204ENST00000430682 CES3Q6UWW8 571 aa12.16□□□□□ -0.46
SMPD4-204ENST00000430682 OOSP2Q86WS3 158 aa12.16□□□□□ -0.46
SMPD4-204ENST00000430682 RASGRP3Q8IV61 690 aa12.16□□□□□ -0.46
SMPD4-204ENST00000430682 ADGRF3Q8IZF5 1079 aa12.16□□□□□ -0.46
SMPD4-204ENST00000430682 D2HGDHQ8N465 521 aa12.16□□□□□ -0.46
SMPD4-204ENST00000430682 SIDT2Q8NBJ9 832 aaKnown RBP12.16□□□□□ -0.46
SMPD4-204ENST00000430682 SLC38A9Q8NBW4 561 aa12.16□□□□□ -0.46
SMPD4-204ENST00000430682 OR6P1Q8NGX9 317 aa12.16□□□□□ -0.46
SMPD4-204ENST00000430682 OR4L1Q8NH43 312 aa12.16□□□□□ -0.46
SMPD4-204ENST00000430682 TFGQ92734 400 aaPredicted RBP12.16□□□□□ -0.46
SMPD4-204ENST00000430682 ALS2CR12Q96Q35 445 aa12.16□□□□□ -0.46
SMPD4-204ENST00000430682 TRIM56Q9BRZ2 755 aaKnown RBP12.16□□□□□ -0.46
SMPD4-204ENST00000430682 HGH1Q9BTY7 390 aa12.16□□□□□ -0.46
SMPD4-204ENST00000430682 KLHL25Q9H0H3 589 aa12.16□□□□□ -0.46
SMPD4-204ENST00000430682 KCNF1Q9H3M0 494 aa12.16□□□□□ -0.46
SMPD4-204ENST00000430682 GPN2Q9H9Y4 310 aaPredicted RBP12.16□□□□□ -0.46
SMPD4-204ENST00000430682 TREX1Q9NSU2 369 aa12.16□□□□□ -0.46
SMPD4-204ENST00000430682 POMT2Q9UKY4 750 aa12.16□□□□□ -0.46
SMPD4-204ENST00000430682 ICKQ9UPZ9 632 aa12.16□□□□□ -0.46
SMPD4-204ENST00000430682 CDYLQ9Y232 598 aa12.16□□□□□ -0.46
SMPD4-204ENST00000430682 RPS6KL1Q9Y6S9 549 aa12.16□□□□□ -0.46
SMPD4-204ENST00000430682 PCSK5Q92824 1860 aa12.16□□□□□ -0.46
SMPD4-204ENST00000430682 UBA6A0AVT1 1052 aaPredicted RBP12.15□□□□□ -0.46
SMPD4-204ENST00000430682 PYCARD-AS1I3L0S3 204 aa12.15□□□□□ -0.46
SMPD4-204ENST00000430682 HCRTR1O43613 425 aa12.15□□□□□ -0.46
SMPD4-204ENST00000430682 AVILO75366 819 aa12.15□□□□□ -0.46
SMPD4-204ENST00000430682 NTRK1P04629 796 aa12.15□□□□□ -0.46
SMPD4-204ENST00000430682 PRKAR1AP10644 381 aa12.15□□□□□ -0.46
SMPD4-204ENST00000430682 PLA2G2AP14555 144 aa12.15□□□□□ -0.46
SMPD4-204ENST00000430682 ST6GAL1P15907 406 aa12.15□□□□□ -0.46
SMPD4-204ENST00000430682 MGAT1P26572 445 aa12.15□□□□□ -0.46
SMPD4-204ENST00000430682 ARNTP27540 789 aa12.15□□□□□ -0.46
SMPD4-204ENST00000430682 PRDX3P30048 256 aaKnown RBP12.15□□□□□ -0.46
SMPD4-204ENST00000430682 CCR7P32248 378 aa12.15□□□□□ -0.46
SMPD4-204ENST00000430682 CD151P48509 253 aa12.15□□□□□ -0.46
SMPD4-204ENST00000430682 CSE1LP55060 971 aaKnown RBP12.15□□□□□ -0.46
SMPD4-204ENST00000430682 RPA4Q13156 261 aa12.15□□□□□ -0.46
SMPD4-204ENST00000430682 TUBB3Q13509 450 aa12.15□□□□□ -0.46
SMPD4-204ENST00000430682 MAP7Q14244 749 aa12.15□□□□□ -0.46
SMPD4-204ENST00000430682 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.15□□□□□ -0.46
SMPD4-204ENST00000430682 ANKRD22Q5VYY1 191 aa12.15□□□□□ -0.46
SMPD4-204ENST00000430682 FAM199XQ6PEV8 388 aaPredicted RBP12.15□□□□□ -0.46
SMPD4-204ENST00000430682 KLHL35Q6PF15 583 aa12.15□□□□□ -0.46
SMPD4-204ENST00000430682 AFTPHQ6ULP2 937 aa12.15□□□□□ -0.46
SMPD4-204ENST00000430682 C6orf15Q6UXA7 325 aaPredicted RBP12.15□□□□□ -0.46
SMPD4-204ENST00000430682 KRT222Q8N1A0 295 aa12.15□□□□□ -0.46
SMPD4-204ENST00000430682 RASGEF1CQ8N431 466 aa12.15□□□□□ -0.46
SMPD4-204ENST00000430682 ACVR1CQ8NER5 493 aa12.15□□□□□ -0.46
SMPD4-204ENST00000430682 FLVCR1-AS1Q8TAF5 88 aa12.15□□□□□ -0.46
SMPD4-204ENST00000430682 LCN9Q8WX39 176 aa12.15□□□□□ -0.46
SMPD4-204ENST00000430682 ELMO1Q92556 727 aa12.15□□□□□ -0.46
SMPD4-204ENST00000430682 ZNF501Q96CX3 271 aaPredicted RBP12.15□□□□□ -0.46
SMPD4-204ENST00000430682 TWSG1Q9GZX9 223 aa12.15□□□□□ -0.46
SMPD4-204ENST00000430682 TFB2MQ9H5Q4 396 aaKnown RBP12.15□□□□□ -0.46
SMPD4-204ENST00000430682 EIF2B3Q9NR50 452 aaKnown RBP12.15□□□□□ -0.46
SMPD4-204ENST00000430682 FGF21Q9NSA1 209 aa12.15□□□□□ -0.46
SMPD4-204ENST00000430682 SYBUQ9NX95 663 aa12.15□□□□□ -0.46
SMPD4-204ENST00000430682 SPHK1Q9NYA1 384 aa12.15□□□□□ -0.46
SMPD4-204ENST00000430682 LNPEPQ9UIQ6 1025 aa12.15□□□□□ -0.46
SMPD4-204ENST00000430682 CROTQ9UKG9 612 aa12.15□□□□□ -0.46
SMPD4-204ENST00000430682 TTC7AQ9ULT0 858 aaPredicted RBP12.15□□□□□ -0.46
SMPD4-204ENST00000430682 PLAGL1Q9UM63 463 aa12.15□□□□□ -0.46
SMPD4-204ENST00000430682 BTRCQ9Y297 605 aa12.15□□□□□ -0.46
SMPD4-204ENST00000430682 ZKSCAN5Q9Y2L8 839 aa12.15□□□□□ -0.46
SMPD4-204ENST00000430682 COLEC10Q9Y6Z7 277 aa12.15□□□□□ -0.46
SMPD4-204ENST00000430682 RELNP78509 3460 aa12.14□□□□□ -0.47
SMPD4-204ENST00000430682 MDC1Q14676 2089 aaKnown RBP12.14□□□□□ -0.47
SMPD4-204ENST00000430682 LIN7AO14910 233 aaPredicted RBP12.14□□□□□ -0.47
SMPD4-204ENST00000430682 ZIC2O95409 532 aaPredicted RBP12.14□□□□□ -0.47
SMPD4-204ENST00000430682 CTSBP07858 339 aa12.14□□□□□ -0.47
SMPD4-204ENST00000430682 F7P08709 466 aaPredicted RBP12.14□□□□□ -0.47
SMPD4-204ENST00000430682 NDUFS1P28331 727 aa12.14□□□□□ -0.47
SMPD4-204ENST00000430682 PEBP1P30086 187 aaKnown RBP12.14□□□□□ -0.47
SMPD4-204ENST00000430682 DLSTP36957 453 aa12.14□□□□□ -0.47
SMPD4-204ENST00000430682 VPS41P49754 854 aa12.14□□□□□ -0.47
SMPD4-204ENST00000430682 HSD11B2P80365 405 aa12.14□□□□□ -0.47
SMPD4-204ENST00000430682 BASP1P80723 227 aaKnown RBP12.14□□□□□ -0.47
SMPD4-204ENST00000430682 KRT33BQ14525 404 aa12.14□□□□□ -0.47
SMPD4-204ENST00000430682 KCNJ11Q14654 390 aa12.14□□□□□ -0.47
SMPD4-204ENST00000430682 ZNF789Q5FWF6 425 aa12.14□□□□□ -0.47
SMPD4-204ENST00000430682 PCID2Q5JVF3 399 aa12.14□□□□□ -0.47
SMPD4-204ENST00000430682 LCN10Q6JVE6 187 aa12.14□□□□□ -0.47
SMPD4-204ENST00000430682 GSTA5Q7RTV2 222 aa12.14□□□□□ -0.47
SMPD4-204ENST00000430682 TRIM73Q86UV7 250 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms