RNA–Protein interactions for RNA: ENST00000430669.6

PTCH1-208, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-208ENST00000430669 SOX4Q06945 474 aaPredicted RBP11.35□□□□□ -0.59
PTCH1-208ENST00000430669 LYSMD3Q7Z3D4 306 aa11.35□□□□□ -0.59
PTCH1-208ENST00000430669 ZNF280BQ86YH2 543 aa11.35□□□□□ -0.59
PTCH1-208ENST00000430669 OR10T2Q8NGX3 314 aa11.35□□□□□ -0.59
PTCH1-208ENST00000430669 SFXN1Q9H9B4 322 aa11.35□□□□□ -0.59
PTCH1-208ENST00000430669 A8MT66 165 aa11.35□□□□□ -0.59
PTCH1-208ENST00000430669 ERN1O75460 977 aaKnown RBP11.35□□□□□ -0.59
PTCH1-208ENST00000430669 HOXD8P13378 290 aaPredicted RBP11.35□□□□□ -0.59
PTCH1-208ENST00000430669 PSMB9P28065 219 aa11.35□□□□□ -0.59
PTCH1-208ENST00000430669 DMTF1Q9Y222 760 aa11.35□□□□□ -0.59
PTCH1-208ENST00000430669 OR2AG2A6NM03 316 aa11.35□□□□□ -0.59
PTCH1-208ENST00000430669 ACVRL1P37023 503 aa11.35□□□□□ -0.59
PTCH1-208ENST00000430669 CHRNA4P43681 627 aa11.35□□□□□ -0.59
PTCH1-208ENST00000430669 INAQ16352 499 aa11.35□□□□□ -0.59
PTCH1-208ENST00000430669 PAQR3Q6TCH7 311 aa11.35□□□□□ -0.59
PTCH1-208ENST00000430669 CACUL1Q86Y37 369 aa11.35□□□□□ -0.59
PTCH1-208ENST00000430669 EFCAB11Q9BUY7 163 aa11.35□□□□□ -0.59
PTCH1-208ENST00000430669 OARD1Q9Y530 152 aa11.35□□□□□ -0.59
PTCH1-208ENST00000430669 ZNF840PA6NDX5 716 aa11.35□□□□□ -0.59
PTCH1-208ENST00000430669 MAGEB17A8MXT2 336 aa11.35□□□□□ -0.59
PTCH1-208ENST00000430669 LEFTY2O00292 366 aa11.35□□□□□ -0.59
PTCH1-208ENST00000430669 SLC35G6P0C7Q6 338 aa11.35□□□□□ -0.59
PTCH1-208ENST00000430669 SLC7A1P30825 629 aa11.35□□□□□ -0.59
PTCH1-208ENST00000430669 RFX3P48380 749 aa11.35□□□□□ -0.59
PTCH1-208ENST00000430669 CENPAP49450 140 aa11.35□□□□□ -0.59
PTCH1-208ENST00000430669 CCDC142Q17RM4 750 aa11.35□□□□□ -0.59
PTCH1-208ENST00000430669 MOCS1Q9NZB8 636 aa11.35□□□□□ -0.59
PTCH1-208ENST00000430669 ATG2BQ96BY7 2078 aa11.35□□□□□ -0.59
PTCH1-208ENST00000430669 ANXA4P09525 319 aaPredicted RBP11.34□□□□□ -0.59
PTCH1-208ENST00000430669 LIPEQ05469 1076 aa11.34□□□□□ -0.59
PTCH1-208ENST00000430669 CHIT1Q13231 466 aa11.34□□□□□ -0.59
PTCH1-208ENST00000430669 VPS26BQ4G0F5 336 aa11.34□□□□□ -0.59
PTCH1-208ENST00000430669 PLEKHG4Q58EX7 1191 aa11.34□□□□□ -0.59
PTCH1-208ENST00000430669 TMEM63BQ5T3F8 832 aa11.34□□□□□ -0.59
PTCH1-208ENST00000430669 GLYATQ6IB77 296 aa11.34□□□□□ -0.59
PTCH1-208ENST00000430669 FRMD7Q6ZUT3 714 aa11.34□□□□□ -0.59
PTCH1-208ENST00000430669 LRRTM4Q86VH4 590 aa11.34□□□□□ -0.59
PTCH1-208ENST00000430669 EFCAB3Q8N7B9 438 aa11.34□□□□□ -0.59
PTCH1-208ENST00000430669 TEX47Q8TBZ9 253 aa11.34□□□□□ -0.59
PTCH1-208ENST00000430669 RPL10LQ96L21 214 aaKnown RBP11.34□□□□□ -0.59
PTCH1-208ENST00000430669 FNDC11Q9BVV2 318 aa11.34□□□□□ -0.59
PTCH1-208ENST00000430669 EIF3FO00303 357 aaPredicted RBP11.34□□□□□ -0.59
PTCH1-208ENST00000430669 NTRK1P04629 796 aa11.34□□□□□ -0.59
PTCH1-208ENST00000430669 FABP3P05413 133 aa11.34□□□□□ -0.59
PTCH1-208ENST00000430669 ARHGAP36Q6ZRI8 547 aa11.34□□□□□ -0.59
PTCH1-208ENST00000430669 HPS6Q86YV9 775 aa11.34□□□□□ -0.59
PTCH1-208ENST00000430669 AP3S1Q92572 193 aa11.34□□□□□ -0.59
PTCH1-208ENST00000430669 MPP4Q96JB8 637 aa11.34□□□□□ -0.59
PTCH1-208ENST00000430669 MRGPRX2Q96LB1 330 aa11.34□□□□□ -0.59
PTCH1-208ENST00000430669 TIMMDC1Q9NPL8 285 aa11.34□□□□□ -0.59
PTCH1-208ENST00000430669 AP4B1Q9Y6B7 739 aa11.34□□□□□ -0.59
PTCH1-208ENST00000430669 COMMD3-BMI1R4GMX3 469 aa11.34□□□□□ -0.59
PTCH1-208ENST00000430669 MYADML2A6NDP7 307 aa11.34□□□□□ -0.59
PTCH1-208ENST00000430669 TIMP1P01033 207 aa11.34□□□□□ -0.59
PTCH1-208ENST00000430669 ECHS1P30084 290 aa11.34□□□□□ -0.59
PTCH1-208ENST00000430669 FAM26DQ5JW98 314 aa11.34□□□□□ -0.59
PTCH1-208ENST00000430669 SPANXN2Q5MJ10 180 aa11.34□□□□□ -0.59
PTCH1-208ENST00000430669 NMD3Q96D46 503 aaKnown RBP11.34□□□□□ -0.59
PTCH1-208ENST00000430669 DENND2DQ9H6A0 471 aaPredicted RBP11.34□□□□□ -0.59
PTCH1-208ENST00000430669 CSNK1G1Q9HCP0 422 aa11.34□□□□□ -0.59
PTCH1-208ENST00000430669 ZNF236Q9UL36 1845 aa11.34□□□□□ -0.59
PTCH1-208ENST00000430669 WASH4PA8MWX3 477 aa11.34□□□□□ -0.59
PTCH1-208ENST00000430669 KPNA4O00629 521 aaPredicted RBP11.34□□□□□ -0.59
PTCH1-208ENST00000430669 INPPL1O15357 1258 aa11.34□□□□□ -0.59
PTCH1-208ENST00000430669 AGR2O95994 175 aa11.34□□□□□ -0.59
PTCH1-208ENST00000430669 ZNF252P-AS1Q0IIN9 211 aa11.34□□□□□ -0.59
PTCH1-208ENST00000430669 PLA2G4EQ3MJ16 856 aa11.34□□□□□ -0.59
PTCH1-208ENST00000430669 RAB41Q5JT25 222 aa11.34□□□□□ -0.59
PTCH1-208ENST00000430669 ZDHHC14Q8IZN3 488 aa11.34□□□□□ -0.59
PTCH1-208ENST00000430669 TMEM40Q8WWA1 233 aa11.34□□□□□ -0.59
PTCH1-208ENST00000430669 CD320Q9NPF0 282 aa11.34□□□□□ -0.59
PTCH1-208ENST00000430669 COPG1Q9Y678 874 aaKnown RBP11.34□□□□□ -0.59
PTCH1-208ENST00000430669 A0A1B0GW55 424 aa11.34□□□□□ -0.59
PTCH1-208ENST00000430669 AP3D1O14617 1153 aa11.34□□□□□ -0.59
PTCH1-208ENST00000430669 FANCGO15287 622 aa11.34□□□□□ -0.59
PTCH1-208ENST00000430669 VIPP01282 170 aa11.34□□□□□ -0.59
PTCH1-208ENST00000430669 DUX4L2P0CJ85 424 aa11.34□□□□□ -0.59
PTCH1-208ENST00000430669 DUX4L3P0CJ86 424 aa11.34□□□□□ -0.59
PTCH1-208ENST00000430669 DUX4L4P0CJ87 422 aa11.34□□□□□ -0.59
PTCH1-208ENST00000430669 DUX4L5P0CJ88 424 aa11.34□□□□□ -0.59
PTCH1-208ENST00000430669 DUX4L6P0CJ89 424 aa11.34□□□□□ -0.59
PTCH1-208ENST00000430669 DUX4L7P0CJ90 424 aa11.34□□□□□ -0.59
PTCH1-208ENST00000430669 CREB1P16220 341 aa11.34□□□□□ -0.59
PTCH1-208ENST00000430669 UBXN11Q5T124 520 aa11.34□□□□□ -0.59
PTCH1-208ENST00000430669 VWA5B1Q5TIE3 1220 aa11.34□□□□□ -0.59
PTCH1-208ENST00000430669 SCIMPQ6UWF3 145 aa11.34□□□□□ -0.59
PTCH1-208ENST00000430669 RGL4Q8IZJ4 473 aa11.34□□□□□ -0.59
PTCH1-208ENST00000430669 CMTM8Q8IZV2 173 aa11.34□□□□□ -0.59
PTCH1-208ENST00000430669 HDDC3Q8N4P3 179 aa11.34□□□□□ -0.59
PTCH1-208ENST00000430669 OXR1Q8N573 874 aa11.34□□□□□ -0.59
PTCH1-208ENST00000430669 S100ZQ8WXG8 99 aa11.34□□□□□ -0.59
PTCH1-208ENST00000430669 TRMT2BQ96GJ1 504 aaKnown RBP11.34□□□□□ -0.59
PTCH1-208ENST00000430669 ZSCAN32Q9NX65 697 aa11.34□□□□□ -0.59
PTCH1-208ENST00000430669 DUX4Q9UBX2 424 aa11.34□□□□□ -0.59
PTCH1-208ENST00000430669 SEC14L3Q9UDX4 400 aa11.34□□□□□ -0.59
PTCH1-208ENST00000430669 EGFL7Q9UHF1 273 aa11.34□□□□□ -0.59
PTCH1-208ENST00000430669 ERGIC3Q9Y282 383 aa11.34□□□□□ -0.59
PTCH1-208ENST00000430669 AQP12BA6NM10 295 aa11.34□□□□□ -0.59
PTCH1-208ENST00000430669 STX11O75558 287 aa11.34□□□□□ -0.59
PTCH1-208ENST00000430669 DLDP09622 509 aaKnown RBP11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms