RNA–Protein interactions for RNA: ENST00000427897.1

HSPG2-205, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-205ENST00000427897 TTPAP49638 278 aa20.11■□□□□ 0.81
HSPG2-205ENST00000427897 CSE1LP55060 971 aaKnown RBP20.11■□□□□ 0.81
HSPG2-205ENST00000427897 HSD11B2P80365 405 aa20.11■□□□□ 0.81
HSPG2-205ENST00000427897 ACVR1Q04771 509 aa20.11■□□□□ 0.81
HSPG2-205ENST00000427897 ABHD18Q0P651 414 aa20.11■□□□□ 0.81
HSPG2-205ENST00000427897 TUBB3Q13509 450 aa20.11■□□□□ 0.81
HSPG2-205ENST00000427897 PTRHD1Q6GMV3 140 aaKnown RBP20.11■□□□□ 0.81
HSPG2-205ENST00000427897 CASC4Q6P4E1 433 aa20.11■□□□□ 0.81
HSPG2-205ENST00000427897 LRRC8BQ6P9F7 803 aa20.11■□□□□ 0.81
HSPG2-205ENST00000427897 RASGEF1CQ8N431 466 aa20.11■□□□□ 0.81
HSPG2-205ENST00000427897 GSDMBQ8TAX9 411 aa20.11■□□□□ 0.81
HSPG2-205ENST00000427897 HGH1Q9BTY7 390 aa20.11■□□□□ 0.81
HSPG2-205ENST00000427897 LNPEPQ9UIQ6 1025 aa20.11■□□□□ 0.81
HSPG2-205ENST00000427897 TDRKHQ9Y2W6 561 aaKnown RBP20.11■□□□□ 0.81
HSPG2-205ENST00000427897 TMEM184BQ9Y519 407 aaPredicted RBP20.11■□□□□ 0.81
HSPG2-205ENST00000427897 SDK2Q58EX2 2172 aa20.11■□□□□ 0.81
HSPG2-205ENST00000427897 NDUFS3O75489 264 aa20.1■□□□□ 0.81
HSPG2-205ENST00000427897 KIAA0754O94854 1291 aa20.1■□□□□ 0.81
HSPG2-205ENST00000427897 ZBTB11O95625 1053 aaPredicted RBP20.1■□□□□ 0.81
HSPG2-205ENST00000427897 PRB1P04280 392 aa20.1■□□□□ 0.81
HSPG2-205ENST00000427897 TPSB2P20231 275 aa20.1■□□□□ 0.81
HSPG2-205ENST00000427897 TPSAB1Q15661 275 aa20.1■□□□□ 0.81
HSPG2-205ENST00000427897 CCDC137Q6PK04 289 aaKnown RBP20.1■□□□□ 0.81
HSPG2-205ENST00000427897 C6orf15Q6UXA7 325 aaPredicted RBP20.1■□□□□ 0.81
HSPG2-205ENST00000427897 NAPRTQ6XQN6 538 aa20.1■□□□□ 0.81
HSPG2-205ENST00000427897 SDCCAG8Q86SQ7 713 aaPredicted RBP20.1■□□□□ 0.81
HSPG2-205ENST00000427897 AMIGO1Q86WK6 493 aa20.1■□□□□ 0.81
HSPG2-205ENST00000427897 GRK7Q8WTQ7 553 aa20.1■□□□□ 0.81
HSPG2-205ENST00000427897 TRIM44Q96DX7 344 aaPredicted RBP20.1■□□□□ 0.81
HSPG2-205ENST00000427897 RNF31Q96EP0 1072 aa20.1■□□□□ 0.81
HSPG2-205ENST00000427897 SGSM3Q96HU1 749 aa20.1■□□□□ 0.81
HSPG2-205ENST00000427897 SAMD15Q9P1V8 674 aa20.1■□□□□ 0.81
HSPG2-205ENST00000427897 POLG2Q9UHN1 485 aa20.1■□□□□ 0.81
HSPG2-205ENST00000427897 SPAG6O75602 509 aa20.09■□□□□ 0.81
HSPG2-205ENST00000427897 MT-ND3P03897 115 aa20.09■□□□□ 0.81
HSPG2-205ENST00000427897 PAMP19021 973 aa20.09■□□□□ 0.81
HSPG2-205ENST00000427897 NMBRP28336 390 aa20.09■□□□□ 0.81
HSPG2-205ENST00000427897 COILP38432 576 aaPredicted RBP20.09■□□□□ 0.81
HSPG2-205ENST00000427897 CYP4F2P78329 520 aa20.09■□□□□ 0.81
HSPG2-205ENST00000427897 LY6DQ14210 128 aa20.09■□□□□ 0.81
HSPG2-205ENST00000427897 KCNAB1Q14722 419 aa20.09■□□□□ 0.81
HSPG2-205ENST00000427897 TIPARPQ7Z3E1 657 aaKnown RBP20.09■□□□□ 0.81
HSPG2-205ENST00000427897 LDB1Q86U70 411 aaPredicted RBP20.09■□□□□ 0.81
HSPG2-205ENST00000427897 BPHLQ86WA6 291 aaPredicted RBP20.09■□□□□ 0.81
HSPG2-205ENST00000427897 UNC5BQ8IZJ1 945 aa20.09■□□□□ 0.81
HSPG2-205ENST00000427897 CARFQ8N187 725 aa20.09■□□□□ 0.81
HSPG2-205ENST00000427897 OR52E1Q8NGJ3 308 aa20.09■□□□□ 0.81
HSPG2-205ENST00000427897 TTC9Q92623 222 aa20.09■□□□□ 0.81
HSPG2-205ENST00000427897 SLC41A2Q96JW4 573 aa20.09■□□□□ 0.81
HSPG2-205ENST00000427897 OSBPL9Q96SU4 736 aa20.09■□□□□ 0.81
HSPG2-205ENST00000427897 TFB2MQ9H5Q4 396 aaKnown RBP20.09■□□□□ 0.81
HSPG2-205ENST00000427897 FANCEQ9HB96 536 aa20.09■□□□□ 0.81
HSPG2-205ENST00000427897 FGF21Q9NSA1 209 aa20.09■□□□□ 0.81
HSPG2-205ENST00000427897 LOC101059948A0A1B0GTJ6 334 aa20.08■□□□□ 0.81
HSPG2-205ENST00000427897 ZNF891A8MT65 544 aaPredicted RBP20.08■□□□□ 0.81
HSPG2-205ENST00000427897 C2orf74A8MZ97 194 aa20.08■□□□□ 0.81
HSPG2-205ENST00000427897 VAPBO95292 243 aa20.08■□□□□ 0.81
HSPG2-205ENST00000427897 APOA4P06727 396 aa20.08■□□□□ 0.81
HSPG2-205ENST00000427897 EBLN1P0CF75 366 aa20.08■□□□□ 0.81
HSPG2-205ENST00000427897 FGF5P12034 268 aa20.08■□□□□ 0.81
HSPG2-205ENST00000427897 FOLR1P15328 257 aa20.08■□□□□ 0.81
HSPG2-205ENST00000427897 KPNA2P52292 529 aaKnown RBP20.08■□□□□ 0.81
HSPG2-205ENST00000427897 HSPA14Q0VDF9 509 aa20.08■□□□□ 0.81
HSPG2-205ENST00000427897 MAP7Q14244 749 aa20.08■□□□□ 0.81
HSPG2-205ENST00000427897 TMED2Q15363 201 aa20.08■□□□□ 0.81
HSPG2-205ENST00000427897 KCTD19Q17RG1 926 aaPredicted RBP20.08■□□□□ 0.81
HSPG2-205ENST00000427897 LARP7Q4G0J3 582 aaKnown RBP eCLIP20.08■□□□□ 0.81
HSPG2-205ENST00000427897 MRNIPQ6NTE8 343 aa20.08■□□□□ 0.81
HSPG2-205ENST00000427897 XKR5Q6UX68 686 aa20.08■□□□□ 0.81
HSPG2-205ENST00000427897 ZNF534Q76KX8 674 aa20.08■□□□□ 0.81
HSPG2-205ENST00000427897 TBC1D21Q8IYX1 336 aa20.08■□□□□ 0.81
HSPG2-205ENST00000427897 GALNT6Q8NCL4 622 aa20.08■□□□□ 0.81
HSPG2-205ENST00000427897 OR5AR1Q8NGP9 310 aa20.08■□□□□ 0.81
HSPG2-205ENST00000427897 ASZ1Q8WWH4 475 aa20.08■□□□□ 0.81
HSPG2-205ENST00000427897 EXTL1Q92935 676 aa20.08■□□□□ 0.81
HSPG2-205ENST00000427897 PANX3Q96QZ0 392 aa20.08■□□□□ 0.81
HSPG2-205ENST00000427897 CARD6Q9BX69 1037 aa20.08■□□□□ 0.81
HSPG2-205ENST00000427897 C1GALT1Q9NS00 363 aa20.08■□□□□ 0.81
HSPG2-205ENST00000427897 KCND1Q9NSA2 647 aa20.08■□□□□ 0.81
HSPG2-205ENST00000427897 SYBUQ9NX95 663 aa20.08■□□□□ 0.81
HSPG2-205ENST00000427897 GNPTGQ9UJJ9 305 aa20.08■□□□□ 0.81
HSPG2-205ENST00000427897 PCDHB3Q9Y5E6 796 aa20.08■□□□□ 0.81
HSPG2-205ENST00000427897 RPS6KL1Q9Y6S9 549 aa20.08■□□□□ 0.81
HSPG2-205ENST00000427897 PRMT5O14744 637 aaPredicted RBP20.07■□□□□ 0.8
HSPG2-205ENST00000427897 ITGB2P05107 769 aa20.07■□□□□ 0.8
HSPG2-205ENST00000427897 ZNF28P17035 718 aa20.07■□□□□ 0.8
HSPG2-205ENST00000427897 WT1P19544 449 aaPredicted RBP20.07■□□□□ 0.8
HSPG2-205ENST00000427897 SHMT2P34897 504 aa20.07■□□□□ 0.8
HSPG2-205ENST00000427897 COL9A2Q14055 689 aaPredicted RBP20.07■□□□□ 0.8
HSPG2-205ENST00000427897 SEMA3AQ14563 771 aa20.07■□□□□ 0.8
HSPG2-205ENST00000427897 TTC27Q6P3X3 843 aa20.07■□□□□ 0.8
HSPG2-205ENST00000427897 CES3Q6UWW8 571 aa20.07■□□□□ 0.8
HSPG2-205ENST00000427897 CFAP61Q8NHU2 1237 aa20.07■□□□□ 0.8
HSPG2-205ENST00000427897 SPRY4Q9C004 299 aa20.07■□□□□ 0.8
HSPG2-205ENST00000427897 XKR8Q9H6D3 395 aa20.07■□□□□ 0.8
HSPG2-205ENST00000427897 MRM3Q9HC36 420 aaKnown RBP20.07■□□□□ 0.8
HSPG2-205ENST00000427897 SEMA5BQ9P283 1151 aa20.07■□□□□ 0.8
HSPG2-205ENST00000427897 PADI1Q9ULC6 663 aa20.07■□□□□ 0.8
HSPG2-205ENST00000427897 PTPRQQ9UMZ3 2332 aa20.07■□□□□ 0.8
HSPG2-205ENST00000427897 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms