RNA–Protein interactions for RNA: ENST00000427506.5

GPC1-205, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-205ENST00000427506 ZNF658BQ4V348 819 aaPredicted RBP17.93■□□□□ 0.46
GPC1-205ENST00000427506 PCID2Q5JVF3 399 aa17.93■□□□□ 0.46
GPC1-205ENST00000427506 TMTC4Q5T4D3 741 aa17.93■□□□□ 0.46
GPC1-205ENST00000427506 CERS6Q6ZMG9 384 aa17.93■□□□□ 0.46
GPC1-205ENST00000427506 EXD3Q8N9H8 876 aa17.93■□□□□ 0.46
GPC1-205ENST00000427506 HGH1Q9BTY7 390 aa17.93■□□□□ 0.46
GPC1-205ENST00000427506 EIF2B3Q9NR50 452 aaKnown RBP17.93■□□□□ 0.46
GPC1-205ENST00000427506 AP3B1O00203 1094 aa17.92■□□□□ 0.46
GPC1-205ENST00000427506 MATN2O00339 956 aa17.92■□□□□ 0.46
GPC1-205ENST00000427506 OR1I1O60431 355 aa17.92■□□□□ 0.46
GPC1-205ENST00000427506 ZBTB11O95625 1053 aaPredicted RBP17.92■□□□□ 0.46
GPC1-205ENST00000427506 FAM87AP0C7U9 286 aa17.92■□□□□ 0.46
GPC1-205ENST00000427506 PRKAR1AP10644 381 aa17.92■□□□□ 0.46
GPC1-205ENST00000427506 CDH3P22223 829 aa17.92■□□□□ 0.46
GPC1-205ENST00000427506 NAPRTQ6XQN6 538 aa17.92■□□□□ 0.46
GPC1-205ENST00000427506 OR52E1Q8NGJ3 308 aa17.92■□□□□ 0.46
GPC1-205ENST00000427506 CHRAC1Q9NRG0 131 aa17.92■□□□□ 0.46
GPC1-205ENST00000427506 FGF21Q9NSA1 209 aa17.92■□□□□ 0.46
GPC1-205ENST00000427506 IL17BQ9UHF5 180 aa17.92■□□□□ 0.46
GPC1-205ENST00000427506 NKX2-8O15522 239 aa17.91■□□□□ 0.46
GPC1-205ENST00000427506 MT-ND3P03897 115 aa17.91■□□□□ 0.46
GPC1-205ENST00000427506 DLSTP36957 453 aa17.91■□□□□ 0.46
GPC1-205ENST00000427506 TERF1P54274 439 aa17.91■□□□□ 0.46
GPC1-205ENST00000427506 MC1RQ01726 317 aa17.91■□□□□ 0.46
GPC1-205ENST00000427506 ACVR1Q04771 509 aa17.91■□□□□ 0.46
GPC1-205ENST00000427506 AARS2Q5JTZ9 985 aaKnown RBP17.91■□□□□ 0.46
GPC1-205ENST00000427506 C16orf46Q6P387 395 aa17.91■□□□□ 0.46
GPC1-205ENST00000427506 BORAQ6PGQ7 559 aa17.91■□□□□ 0.46
GPC1-205ENST00000427506 FBXO38Q6PIJ6 1188 aa17.91■□□□□ 0.46
GPC1-205ENST00000427506 BPHLQ86WA6 291 aaPredicted RBP17.91■□□□□ 0.46
GPC1-205ENST00000427506 AMIGO1Q86WK6 493 aa17.91■□□□□ 0.46
GPC1-205ENST00000427506 CARFQ8N187 725 aa17.91■□□□□ 0.46
GPC1-205ENST00000427506 D2HGDHQ8N465 521 aa17.91■□□□□ 0.46
GPC1-205ENST00000427506 STARD8Q92502 1023 aa17.91■□□□□ 0.46
GPC1-205ENST00000427506 PEX13Q92968 403 aa17.91■□□□□ 0.46
GPC1-205ENST00000427506 PPM1MQ96MI6 270 aa17.91■□□□□ 0.46
GPC1-205ENST00000427506 CATSPER2Q96P56 530 aa17.91■□□□□ 0.46
GPC1-205ENST00000427506 TSSK1BQ9BXA7 367 aa17.91■□□□□ 0.46
GPC1-205ENST00000427506 TFB2MQ9H5Q4 396 aaKnown RBP17.91■□□□□ 0.46
GPC1-205ENST00000427506 XKR8Q9H6D3 395 aa17.91■□□□□ 0.46
GPC1-205ENST00000427506 CATSPERZQ9NTU4 200 aa17.91■□□□□ 0.46
GPC1-205ENST00000427506 BFARQ9NZS9 450 aa17.91■□□□□ 0.46
GPC1-205ENST00000427506 POMT2Q9UKY4 750 aa17.91■□□□□ 0.46
GPC1-205ENST00000427506 ASF1AQ9Y294 204 aa17.91■□□□□ 0.46
GPC1-205ENST00000427506 SLC9B1P1A6NJY1 282 aa17.9■□□□□ 0.46
GPC1-205ENST00000427506 BTN3A1O00481 513 aa17.9■□□□□ 0.46
GPC1-205ENST00000427506 MAP3K7O43318 606 aa17.9■□□□□ 0.46
GPC1-205ENST00000427506 KATNA1O75449 491 aa17.9■□□□□ 0.46
GPC1-205ENST00000427506 TIAF1O95411 115 aa17.9■□□□□ 0.46
GPC1-205ENST00000427506 SFTPCP11686 197 aa17.9■□□□□ 0.46
GPC1-205ENST00000427506 ITGB6P18564 788 aa17.9■□□□□ 0.46
GPC1-205ENST00000427506 TCN2P20062 427 aa17.9■□□□□ 0.46
GPC1-205ENST00000427506 NPY2RP49146 381 aa17.9■□□□□ 0.46
GPC1-205ENST00000427506 CSE1LP55060 971 aaKnown RBP17.9■□□□□ 0.46
GPC1-205ENST00000427506 CRADDP78560 199 aa17.9■□□□□ 0.46
GPC1-205ENST00000427506 PLOD1Q02809 727 aaPredicted RBP17.9■□□□□ 0.46
GPC1-205ENST00000427506 TRIP13Q15645 432 aaPredicted RBP17.9■□□□□ 0.46
GPC1-205ENST00000427506 GPR19Q15760 415 aa17.9■□□□□ 0.46
GPC1-205ENST00000427506 PWWP2BQ6NUJ5 590 aa17.9■□□□□ 0.46
GPC1-205ENST00000427506 ZNF534Q76KX8 674 aa17.9■□□□□ 0.46
GPC1-205ENST00000427506 OR5AR1Q8NGP9 310 aa17.9■□□□□ 0.46
GPC1-205ENST00000427506 FCRL4Q96PJ5 515 aa17.9■□□□□ 0.46
GPC1-205ENST00000427506 IL22Q9GZX6 179 aa17.9■□□□□ 0.46
GPC1-205ENST00000427506 FANCEQ9HB96 536 aa17.9■□□□□ 0.46
GPC1-205ENST00000427506 C1GALT1Q9NS00 363 aa17.9■□□□□ 0.46
GPC1-205ENST00000427506 CROTQ9UKG9 612 aa17.9■□□□□ 0.46
GPC1-205ENST00000427506 PADI1Q9ULC6 663 aa17.9■□□□□ 0.46
GPC1-205ENST00000427506 TTC7AQ9ULT0 858 aaPredicted RBP17.9■□□□□ 0.46
GPC1-205ENST00000427506 TDRKHQ9Y2W6 561 aaKnown RBP17.9■□□□□ 0.46
GPC1-205ENST00000427506 JRKLQ9Y4A0 524 aa17.9■□□□□ 0.46
GPC1-205ENST00000427506 PCDHB3Q9Y5E6 796 aa17.9■□□□□ 0.46
GPC1-205ENST00000427506 MRPS18BQ9Y676 258 aaKnown RBP17.9■□□□□ 0.46
GPC1-205ENST00000427506 GOLGA6L3A6NEY3 463 aa17.89■□□□□ 0.45
GPC1-205ENST00000427506 C2orf74A8MZ97 194 aa17.89■□□□□ 0.45
GPC1-205ENST00000427506 B8ZZF3 427 aa17.89■□□□□ 0.45
GPC1-205ENST00000427506 BTN3A3O00478 584 aa17.89■□□□□ 0.45
GPC1-205ENST00000427506 NTRK1P04629 796 aa17.89■□□□□ 0.45
GPC1-205ENST00000427506 PRDX3P30048 256 aaKnown RBP17.89■□□□□ 0.45
GPC1-205ENST00000427506 CCR10P46092 362 aa17.89■□□□□ 0.45
GPC1-205ENST00000427506 VPS41P49754 854 aa17.89■□□□□ 0.45
GPC1-205ENST00000427506 TUBB4BP68371 445 aa17.89■□□□□ 0.45
GPC1-205ENST00000427506 CDC20Q12834 499 aa17.89■□□□□ 0.45
GPC1-205ENST00000427506 NFATC3Q12968 1075 aa17.89■□□□□ 0.45
GPC1-205ENST00000427506 TUBB2AQ13885 445 aa17.89■□□□□ 0.45
GPC1-205ENST00000427506 SEMA3AQ14563 771 aa17.89■□□□□ 0.45
GPC1-205ENST00000427506 KCTD19Q17RG1 926 aaPredicted RBP17.89■□□□□ 0.45
GPC1-205ENST00000427506 LDB1Q86U70 411 aaPredicted RBP17.89■□□□□ 0.45
GPC1-205ENST00000427506 HOOK3Q86VS8 718 aa17.89■□□□□ 0.45
GPC1-205ENST00000427506 TMEM126BQ8IUX1 230 aa17.89■□□□□ 0.45
GPC1-205ENST00000427506 TBC1D21Q8IYX1 336 aa17.89■□□□□ 0.45
GPC1-205ENST00000427506 PRELID2Q8N945 189 aa17.89■□□□□ 0.45
GPC1-205ENST00000427506 SGSM3Q96HU1 749 aa17.89■□□□□ 0.45
GPC1-205ENST00000427506 NRTNQ99748 197 aa17.89■□□□□ 0.45
GPC1-205ENST00000427506 TUBB2BQ9BVA1 445 aa17.89■□□□□ 0.45
GPC1-205ENST00000427506 GRPEL1Q9HAV7 217 aa17.89■□□□□ 0.45
GPC1-205ENST00000427506 KCND1Q9NSA2 647 aa17.89■□□□□ 0.45
GPC1-205ENST00000427506 POLG2Q9UHN1 485 aa17.89■□□□□ 0.45
GPC1-205ENST00000427506 SMG1Q96Q15 3661 aaKnown RBP17.89■□□□□ 0.45
GPC1-205ENST00000427506 SLC5A10A0PJK1 596 aa17.88■□□□□ 0.45
GPC1-205ENST00000427506 CD3EAPO15446 510 aaKnown RBP17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms