RNA–Protein interactions for RNA: ENST00000426763.3

RPL28-202, Transcript of ribosomal protein L28, humanhuman

TSL 1 (best)

Gene RPL28, Length 5,620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-202ENST00000426763 ADSLP30566 484 aaPredicted RBP13.64□□□□□ -0.23
RPL28-202ENST00000426763 LARS2Q15031 903 aaKnown RBP13.64□□□□□ -0.23
RPL28-202ENST00000426763 GPRC6AQ5T6X5 926 aa13.64□□□□□ -0.23
RPL28-202ENST00000426763 VWA5B1Q5TIE3 1220 aa13.64□□□□□ -0.23
RPL28-202ENST00000426763 BEND5Q7L4P6 421 aa13.64□□□□□ -0.23
RPL28-202ENST00000426763 RORBQ92753 470 aa13.64□□□□□ -0.23
RPL28-202ENST00000426763 HIC2Q96JB3 615 aa13.64□□□□□ -0.23
RPL28-202ENST00000426763 ZIC5Q96T25 663 aa13.64□□□□□ -0.23
RPL28-202ENST00000426763 HBEGFQ99075 208 aa13.64□□□□□ -0.23
RPL28-202ENST00000426763 ADGRE2Q9UHX3 823 aa13.64□□□□□ -0.23
RPL28-202ENST00000426763 KCTD3Q9Y597 815 aa13.64□□□□□ -0.23
RPL28-202ENST00000426763 AP2A2O94973 939 aa13.63□□□□□ -0.23
RPL28-202ENST00000426763 MATN4O95460 622 aa13.63□□□□□ -0.23
RPL28-202ENST00000426763 TPP2P29144 1249 aaPredicted RBP13.63□□□□□ -0.23
RPL28-202ENST00000426763 FBXW8Q8N3Y1 598 aa13.63□□□□□ -0.23
RPL28-202ENST00000426763 SMPDL3AQ92484 453 aa13.63□□□□□ -0.23
RPL28-202ENST00000426763 KLHDC7BQ96G42 594 aa13.63□□□□□ -0.23
RPL28-202ENST00000426763 RNPEPL1Q9HAU8 725 aa13.63□□□□□ -0.23
RPL28-202ENST00000426763 ARL8BQ9NVJ2 186 aa13.63□□□□□ -0.23
RPL28-202ENST00000426763 ADAM30Q9UKF2 790 aa13.63□□□□□ -0.23
RPL28-202ENST00000426763 TCRBV21S2A2A0A5A6 115 aa13.63□□□□□ -0.23
RPL28-202ENST00000426763 KRT33AO76009 404 aa13.63□□□□□ -0.23
RPL28-202ENST00000426763 AHSGP02765 367 aa13.63□□□□□ -0.23
RPL28-202ENST00000426763 ZNF8P17098 575 aaPredicted RBP13.63□□□□□ -0.23
RPL28-202ENST00000426763 STK19P49842 368 aaPredicted RBP13.63□□□□□ -0.23
RPL28-202ENST00000426763 GALNT18Q6P9A2 607 aa13.63□□□□□ -0.23
RPL28-202ENST00000426763 CLNKQ7Z7G1 428 aa13.63□□□□□ -0.23
RPL28-202ENST00000426763 GLIS1Q8NBF1 620 aa13.63□□□□□ -0.23
RPL28-202ENST00000426763 TOP1MTQ969P6 601 aa13.63□□□□□ -0.23
RPL28-202ENST00000426763 Q96MT0 163 aa13.63□□□□□ -0.23
RPL28-202ENST00000426763 GTPBP2Q9BX10 602 aaKnown RBP13.63□□□□□ -0.23
RPL28-202ENST00000426763 OSBPL10Q9BXB5 764 aa13.63□□□□□ -0.23
RPL28-202ENST00000426763 SLC32A1Q9H598 525 aa13.63□□□□□ -0.23
RPL28-202ENST00000426763 MAGEE1Q9HCI5 957 aa13.63□□□□□ -0.23
RPL28-202ENST00000426763 GKP32189 559 aa13.63□□□□□ -0.23
RPL28-202ENST00000426763 NRF1Q16656 503 aa13.63□□□□□ -0.23
RPL28-202ENST00000426763 LRRTM3Q86VH5 581 aa13.63□□□□□ -0.23
RPL28-202ENST00000426763 DEPDC4Q8N2C3 294 aa13.63□□□□□ -0.23
RPL28-202ENST00000426763 GLB1L3Q8NCI6 653 aaPredicted RBP13.63□□□□□ -0.23
RPL28-202ENST00000426763 PNPT1Q8TCS8 783 aaKnown RBP13.63□□□□□ -0.23
RPL28-202ENST00000426763 TFGQ92734 400 aaPredicted RBP13.63□□□□□ -0.23
RPL28-202ENST00000426763 ANKHQ9HCJ1 492 aa13.63□□□□□ -0.23
RPL28-202ENST00000426763 ARHGEF9O43307 516 aa13.63□□□□□ -0.23
RPL28-202ENST00000426763 RPS14P62263 151 aaKnown RBP13.63□□□□□ -0.23
RPL28-202ENST00000426763 RPS21P63220 83 aaKnown RBP13.63□□□□□ -0.23
RPL28-202ENST00000426763 SRSF11Q05519 484 aaKnown RBP13.63□□□□□ -0.23
RPL28-202ENST00000426763 TOP3AQ13472 1001 aaPredicted RBP13.63□□□□□ -0.23
RPL28-202ENST00000426763 SLBPQ14493 270 aaKnown RBP eCLIP13.63□□□□□ -0.23
RPL28-202ENST00000426763 SUZ12Q15022 739 aaKnown RBP13.63□□□□□ -0.23
RPL28-202ENST00000426763 MBOAT1Q6ZNC8 495 aa13.63□□□□□ -0.23
RPL28-202ENST00000426763 DPY19L3Q6ZPD9 716 aa13.63□□□□□ -0.23
RPL28-202ENST00000426763 IMP4Q96G21 291 aaKnown RBP13.63□□□□□ -0.23
RPL28-202ENST00000426763 MUC13Q9H3R2 512 aa13.63□□□□□ -0.23
RPL28-202ENST00000426763 CDC14AQ9UNH5 594 aa13.63□□□□□ -0.23
RPL28-202ENST00000426763 C2orf71A6NGG8 1288 aa13.62□□□□□ -0.23
RPL28-202ENST00000426763 CXorf49A8MYA2 514 aaPredicted RBP13.62□□□□□ -0.23
RPL28-202ENST00000426763 IGFALSP35858 605 aa13.62□□□□□ -0.23
RPL28-202ENST00000426763 USP46P62068 366 aa13.62□□□□□ -0.23
RPL28-202ENST00000426763 NFKB2Q00653 900 aa13.62□□□□□ -0.23
RPL28-202ENST00000426763 QPCTQ16769 361 aa13.62□□□□□ -0.23
RPL28-202ENST00000426763 ZNF184Q99676 751 aaPredicted RBP13.62□□□□□ -0.23
RPL28-202ENST00000426763 SGIP1Q9BQI5 828 aa13.62□□□□□ -0.23
RPL28-202ENST00000426763 FAM83CQ9BQN1 747 aa13.62□□□□□ -0.23
RPL28-202ENST00000426763 COPS7AQ9UBW8 275 aa13.62□□□□□ -0.23
RPL28-202ENST00000426763 PTGES3LE9PB15 166 aa13.62□□□□□ -0.23
RPL28-202ENST00000426763 GRID2O43424 1007 aa13.62□□□□□ -0.23
RPL28-202ENST00000426763 IL6P05231 212 aa13.62□□□□□ -0.23
RPL28-202ENST00000426763 PRDX6P30041 224 aa13.62□□□□□ -0.23
RPL28-202ENST00000426763 ELAVL3Q14576 367 aaKnown RBP13.62□□□□□ -0.23
RPL28-202ENST00000426763 CILP2Q8IUL8 1156 aa13.62□□□□□ -0.23
RPL28-202ENST00000426763 WDR36Q8NI36 951 aaKnown RBP13.62□□□□□ -0.23
RPL28-202ENST00000426763 CLN6Q9NWW5 311 aa13.62□□□□□ -0.23
RPL28-202ENST00000426763 TMEM98Q9Y2Y6 226 aa13.62□□□□□ -0.23
RPL28-202ENST00000426763 MAP4K5Q9Y4K4 846 aa13.62□□□□□ -0.23
RPL28-202ENST00000426763 GMPPBQ9Y5P6 360 aa13.62□□□□□ -0.23
RPL28-202ENST00000426763 TSPAN6O43657 245 aa13.62□□□□□ -0.23
RPL28-202ENST00000426763 TSPAN19P0C672 248 aa13.62□□□□□ -0.23
RPL28-202ENST00000426763 ZNF24P17028 368 aa13.62□□□□□ -0.23
RPL28-202ENST00000426763 DNAJB1P25685 340 aa13.62□□□□□ -0.23
RPL28-202ENST00000426763 SLC13A2Q13183 592 aa13.62□□□□□ -0.23
RPL28-202ENST00000426763 OLIG2Q13516 323 aa13.62□□□□□ -0.23
RPL28-202ENST00000426763 SLC9A5Q14940 896 aa13.62□□□□□ -0.23
RPL28-202ENST00000426763 SLC9B2Q86UD5 537 aa13.62□□□□□ -0.23
RPL28-202ENST00000426763 KIAA2013Q8IYS2 634 aa13.62□□□□□ -0.23
RPL28-202ENST00000426763 KLHDC9Q8NEP7 349 aa13.62□□□□□ -0.23
RPL28-202ENST00000426763 TRPV1Q8NER1 839 aa13.62□□□□□ -0.23
RPL28-202ENST00000426763 HM13Q8TCT9 377 aa13.62□□□□□ -0.23
RPL28-202ENST00000426763 LMX1AQ8TE12 382 aa13.62□□□□□ -0.23
RPL28-202ENST00000426763 DNASE1L2Q92874 299 aa13.62□□□□□ -0.23
RPL28-202ENST00000426763 MTERF1Q99551 399 aaKnown RBP13.62□□□□□ -0.23
RPL28-202ENST00000426763 GPR22Q99680 433 aa13.62□□□□□ -0.23
RPL28-202ENST00000426763 SLITRK2Q9H156 845 aa13.62□□□□□ -0.23
RPL28-202ENST00000426763 OXSMQ9NWU1 459 aa13.62□□□□□ -0.23
RPL28-202ENST00000426763 CALML5Q9NZT1 146 aa13.62□□□□□ -0.23
RPL28-202ENST00000426763 NPC1O15118 1278 aa13.62□□□□□ -0.23
RPL28-202ENST00000426763 UGT2B17O75795 530 aa13.62□□□□□ -0.23
RPL28-202ENST00000426763 UBXN7O94888 489 aa13.62□□□□□ -0.23
RPL28-202ENST00000426763 VIPR2P41587 438 aa13.62□□□□□ -0.23
RPL28-202ENST00000426763 MLLT3P42568 568 aaPredicted RBP13.62□□□□□ -0.23
RPL28-202ENST00000426763 MRPL28Q13084 256 aaKnown RBP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms