RNA–Protein interactions for RNA: ENST00000426253.5

NIF3L1-207, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-207ENST00000426253 LMX1AQ8TE12 382 aa6.15□□□□□ -1.42
NIF3L1-207ENST00000426253 RAPGEF5Q92565 580 aa6.15□□□□□ -1.42
NIF3L1-207ENST00000426253 ECHDC3Q96DC8 303 aa6.15□□□□□ -1.42
NIF3L1-207ENST00000426253 APOLD1Q96LR9 279 aa6.15□□□□□ -1.42
NIF3L1-207ENST00000426253 RNF157Q96PX1 679 aa6.15□□□□□ -1.42
NIF3L1-207ENST00000426253 APOOQ9BUR5 198 aa6.15□□□□□ -1.42
NIF3L1-207ENST00000426253 BTBD2Q9BX70 525 aa6.15□□□□□ -1.42
NIF3L1-207ENST00000426253 POLR1BQ9H9Y6 1135 aa6.15□□□□□ -1.42
NIF3L1-207ENST00000426253 NOD2Q9HC29 1040 aa6.15□□□□□ -1.42
NIF3L1-207ENST00000426253 NT5MQ9NPB1 228 aa6.15□□□□□ -1.42
NIF3L1-207ENST00000426253 ASCL3Q9NQ33 180 aa6.15□□□□□ -1.42
NIF3L1-207ENST00000426253 RBM22Q9NW64 420 aaKnown RBP eCLIP6.15□□□□□ -1.42
NIF3L1-207ENST00000426253 SPASTQ9UBP0 616 aa6.15□□□□□ -1.42
NIF3L1-207ENST00000426253 ANAPC2Q9UJX6 822 aa6.15□□□□□ -1.42
NIF3L1-207ENST00000426253 TMPRSS11EQ9UL52 423 aa6.15□□□□□ -1.42
NIF3L1-207ENST00000426253 PHTF1Q9UMS5 762 aa6.15□□□□□ -1.42
NIF3L1-207ENST00000426253 CSNK1G3Q9Y6M4 447 aa6.15□□□□□ -1.42
NIF3L1-207ENST00000426253 MED13Q9UHV7 2174 aa6.14□□□□□ -1.43
NIF3L1-207ENST00000426253 LRRD1A4D1F6 860 aa6.14□□□□□ -1.43
NIF3L1-207ENST00000426253 K7ESM1 405 aa6.14□□□□□ -1.43
NIF3L1-207ENST00000426253 MTSS1O43312 755 aa6.14□□□□□ -1.43
NIF3L1-207ENST00000426253 AQP9O43315 295 aa6.14□□□□□ -1.43
NIF3L1-207ENST00000426253 HTRA2O43464 458 aaPredicted RBP6.14□□□□□ -1.43
NIF3L1-207ENST00000426253 NEBLO76041 1014 aa6.14□□□□□ -1.43
NIF3L1-207ENST00000426253 RECQL5O94762 991 aaPredicted RBP6.14□□□□□ -1.43
NIF3L1-207ENST00000426253 MTA2O94776 668 aa6.14□□□□□ -1.43
NIF3L1-207ENST00000426253 TNFP01375 233 aa6.14□□□□□ -1.43
NIF3L1-207ENST00000426253 GIMD1P0DJR0 217 aa6.14□□□□□ -1.43
NIF3L1-207ENST00000426253 PF4V1P10720 104 aa6.14□□□□□ -1.43
NIF3L1-207ENST00000426253 CYP2A6P11509 494 aaPredicted RBP6.14□□□□□ -1.43
NIF3L1-207ENST00000426253 TNNT1P13805 278 aa6.14□□□□□ -1.43
NIF3L1-207ENST00000426253 CTSEP14091 401 aa6.14□□□□□ -1.43
NIF3L1-207ENST00000426253 CCNB1P14635 433 aa6.14□□□□□ -1.43
NIF3L1-207ENST00000426253 ACP1P24666 158 aa6.14□□□□□ -1.43
NIF3L1-207ENST00000426253 NFKBIAP25963 317 aa6.14□□□□□ -1.43
NIF3L1-207ENST00000426253 HTR1BP28222 390 aa6.14□□□□□ -1.43
NIF3L1-207ENST00000426253 MC4RP32245 332 aa6.14□□□□□ -1.43
NIF3L1-207ENST00000426253 MAN1A1P33908 653 aa6.14□□□□□ -1.43
NIF3L1-207ENST00000426253 MMP12P39900 470 aa6.14□□□□□ -1.43
NIF3L1-207ENST00000426253 GARSP41250 739 aaKnown RBP6.14□□□□□ -1.43
NIF3L1-207ENST00000426253 SLC1A1P43005 524 aa6.14□□□□□ -1.43
NIF3L1-207ENST00000426253 UQCRFS1P47985 274 aa6.14□□□□□ -1.43
NIF3L1-207ENST00000426253 BLKP51451 505 aa6.14□□□□□ -1.43
NIF3L1-207ENST00000426253 SRSF3P84103 164 aaKnown RBP6.14□□□□□ -1.43
NIF3L1-207ENST00000426253 PPARDQ03181 441 aa6.14□□□□□ -1.43
NIF3L1-207ENST00000426253 GBE1Q04446 702 aa6.14□□□□□ -1.43
NIF3L1-207ENST00000426253 GALNT2Q10471 571 aa6.14□□□□□ -1.43
NIF3L1-207ENST00000426253 SLC10A2Q12908 348 aaPredicted RBP6.14□□□□□ -1.43
NIF3L1-207ENST00000426253 ILKQ13418 452 aa6.14□□□□□ -1.43
NIF3L1-207ENST00000426253 C1orf61Q13536 156 aa6.14□□□□□ -1.43
NIF3L1-207ENST00000426253 GTF2H3Q13889 308 aa6.14□□□□□ -1.43
NIF3L1-207ENST00000426253 IRF4Q15306 451 aa6.14□□□□□ -1.43
NIF3L1-207ENST00000426253 TBR1Q16650 682 aa6.14□□□□□ -1.43
NIF3L1-207ENST00000426253 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.14□□□□□ -1.43
NIF3L1-207ENST00000426253 WSCD2Q2TBF2 565 aa6.14□□□□□ -1.43
NIF3L1-207ENST00000426253 C3orf38Q5JPI3 329 aa6.14□□□□□ -1.43
NIF3L1-207ENST00000426253 ARMC12Q5T9G4 340 aa6.14□□□□□ -1.43
NIF3L1-207ENST00000426253 PRAMEF9Q5VWM5 478 aa6.14□□□□□ -1.43
NIF3L1-207ENST00000426253 DENND2CQ68D51 928 aa6.14□□□□□ -1.43
NIF3L1-207ENST00000426253 NCBP2-AS2Q69YL0 99 aa6.14□□□□□ -1.43
NIF3L1-207ENST00000426253 DPPA4Q7L190 304 aa6.14□□□□□ -1.43
NIF3L1-207ENST00000426253 RD3Q7Z3Z2 195 aa6.14□□□□□ -1.43
NIF3L1-207ENST00000426253 RHOT1Q8IXI2 618 aa6.14□□□□□ -1.43
NIF3L1-207ENST00000426253 NDUFAF2Q8N183 169 aa6.14□□□□□ -1.43
NIF3L1-207ENST00000426253 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.14□□□□□ -1.43
NIF3L1-207ENST00000426253 TEX26Q8N6G2 289 aa6.14□□□□□ -1.43
NIF3L1-207ENST00000426253 PQLC3Q8N755 202 aa6.14□□□□□ -1.43
NIF3L1-207ENST00000426253 DTX3Q8N9I9 347 aa6.14□□□□□ -1.43
NIF3L1-207ENST00000426253 TC2NQ8N9U0 490 aa6.14□□□□□ -1.43
NIF3L1-207ENST00000426253 PLA2G15Q8NCC3 412 aa6.14□□□□□ -1.43
NIF3L1-207ENST00000426253 CCNYQ8ND76 341 aa6.14□□□□□ -1.43
NIF3L1-207ENST00000426253 JADE3Q92613 823 aa6.14□□□□□ -1.43
NIF3L1-207ENST00000426253 TSACCQ96A04 125 aaPredicted RBP6.14□□□□□ -1.43
NIF3L1-207ENST00000426253 MIB2Q96AX9 1013 aa6.14□□□□□ -1.43
NIF3L1-207ENST00000426253 FAF2Q96CS3 445 aa6.14□□□□□ -1.43
NIF3L1-207ENST00000426253 HSPBAP1Q96EW2 488 aa6.14□□□□□ -1.43
NIF3L1-207ENST00000426253 SCRN2Q96FV2 425 aa6.14□□□□□ -1.43
NIF3L1-207ENST00000426253 TEKT5Q96M29 485 aa6.14□□□□□ -1.43
NIF3L1-207ENST00000426253 TSGA13Q96PP4 275 aa6.14□□□□□ -1.43
NIF3L1-207ENST00000426253 IL12RB2Q99665 862 aa6.14□□□□□ -1.43
NIF3L1-207ENST00000426253 MGME1Q9BQP7 344 aa6.14□□□□□ -1.43
NIF3L1-207ENST00000426253 ZNF670Q9BS34 389 aa6.14□□□□□ -1.43
NIF3L1-207ENST00000426253 ANP32EQ9BTT0 268 aa6.14□□□□□ -1.43
NIF3L1-207ENST00000426253 POLR1EQ9GZS1 481 aaKnown RBP6.14□□□□□ -1.43
NIF3L1-207ENST00000426253 TCEAL2Q9H3H9 227 aaPredicted RBP6.14□□□□□ -1.43
NIF3L1-207ENST00000426253 DLL4Q9NR61 685 aa6.14□□□□□ -1.43
NIF3L1-207ENST00000426253 HAUS2Q9NVX0 235 aa6.14□□□□□ -1.43
NIF3L1-207ENST00000426253 NLGN3Q9NZ94 848 aa6.14□□□□□ -1.43
NIF3L1-207ENST00000426253 INTUQ9ULD6 942 aa6.14□□□□□ -1.43
NIF3L1-207ENST00000426253 PCDHA13Q9Y5I0 950 aa6.14□□□□□ -1.43
NIF3L1-207ENST00000426253 HEY1Q9Y5J3 304 aa6.14□□□□□ -1.43
NIF3L1-207ENST00000426253 GPR45Q9Y5Y3 372 aa6.14□□□□□ -1.43
NIF3L1-207ENST00000426253 ZFC3H1O60293 1989 aaKnown RBP6.14□□□□□ -1.43
NIF3L1-207ENST00000426253 NBASA2RRP1 2371 aa6.14□□□□□ -1.43
NIF3L1-207ENST00000426253 NYNRINQ9P2P1 1898 aaKnown RBP6.13□□□□□ -1.43
NIF3L1-207ENST00000426253 PDZD2O15018 2839 aa6.13□□□□□ -1.43
NIF3L1-207ENST00000426253 CHD5Q8TDI0 1954 aa6.13□□□□□ -1.43
NIF3L1-207ENST00000426253 SVILO95425 2214 aa6.13□□□□□ -1.43
NIF3L1-207ENST00000426253 MED13LQ71F56 2210 aa6.13□□□□□ -1.43
NIF3L1-207ENST00000426253 CPED1A4D0V7 1026 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms