RNA–Protein interactions for RNA: ENST00000425444.1

SGCE-203, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 597 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-203ENST00000425444 ANKRD34CP0C6C1 535 aa12.41□□□□□ -0.42
SGCE-203ENST00000425444 MTHFD1P11586 935 aaKnown RBP12.41□□□□□ -0.42
SGCE-203ENST00000425444 ETS1P14921 441 aa12.41□□□□□ -0.42
SGCE-203ENST00000425444 MSNP26038 577 aaKnown RBP12.41□□□□□ -0.42
SGCE-203ENST00000425444 ACRV1P26436 265 aa12.41□□□□□ -0.42
SGCE-203ENST00000425444 GRNP28799 593 aaKnown RBP12.41□□□□□ -0.42
SGCE-203ENST00000425444 LEPRP48357 1165 aaKnown RBP12.41□□□□□ -0.42
SGCE-203ENST00000425444 PRLHRP49683 370 aa12.41□□□□□ -0.42
SGCE-203ENST00000425444 CACNG1Q06432 222 aa12.41□□□□□ -0.42
SGCE-203ENST00000425444 FOXM1Q08050 763 aa12.41□□□□□ -0.42
SGCE-203ENST00000425444 SEMA5AQ13591 1074 aa12.41□□□□□ -0.42
SGCE-203ENST00000425444 CCDC38Q502W7 563 aa12.41□□□□□ -0.42
SGCE-203ENST00000425444 TCTN3Q6NUS6 607 aa12.41□□□□□ -0.42
SGCE-203ENST00000425444 DUS1LQ6P1R4 473 aaKnown RBP12.41□□□□□ -0.42
SGCE-203ENST00000425444 KLHL35Q6PF15 583 aa12.41□□□□□ -0.42
SGCE-203ENST00000425444 FAM92BQ6ZTR7 304 aa12.41□□□□□ -0.42
SGCE-203ENST00000425444 MICALCLQ6ZW33 695 aa12.41□□□□□ -0.42
SGCE-203ENST00000425444 SERPINA9Q86WD7 417 aa12.41□□□□□ -0.42
SGCE-203ENST00000425444 HM13Q8TCT9 377 aa12.41□□□□□ -0.42
SGCE-203ENST00000425444 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.41□□□□□ -0.42
SGCE-203ENST00000425444 CDKN2AIPNLQ96HQ2 116 aa12.41□□□□□ -0.42
SGCE-203ENST00000425444 LINC00615Q96LM1 132 aaPredicted RBP12.41□□□□□ -0.42
SGCE-203ENST00000425444 TEFMQ96QE5 360 aaKnown RBP12.41□□□□□ -0.42
SGCE-203ENST00000425444 SMARCAL1Q9NZC9 954 aa12.41□□□□□ -0.42
SGCE-203ENST00000425444 PPP2R2CQ9Y2T4 447 aa12.41□□□□□ -0.42
SGCE-203ENST00000425444 WIPF3A6NGB9 483 aa12.4□□□□□ -0.42
SGCE-203ENST00000425444 POLR1CO15160 346 aaPredicted RBP12.4□□□□□ -0.42
SGCE-203ENST00000425444 SUN1O94901 812 aa12.4□□□□□ -0.42
SGCE-203ENST00000425444 C9P02748 559 aa12.4□□□□□ -0.42
SGCE-203ENST00000425444 ZSCAN5DPP0CG00 497 aa12.4□□□□□ -0.42
SGCE-203ENST00000425444 CXCR5P32302 372 aa12.4□□□□□ -0.42
SGCE-203ENST00000425444 CDKN1CP49918 316 aaPredicted RBP12.4□□□□□ -0.42
SGCE-203ENST00000425444 BASP1P80723 227 aaKnown RBP12.4□□□□□ -0.42
SGCE-203ENST00000425444 MC2RQ01718 297 aa12.4□□□□□ -0.42
SGCE-203ENST00000425444 MC1RQ01726 317 aa12.4□□□□□ -0.42
SGCE-203ENST00000425444 LAMB3Q13751 1172 aa12.4□□□□□ -0.42
SGCE-203ENST00000425444 CCNG2Q16589 344 aa12.4□□□□□ -0.42
SGCE-203ENST00000425444 EIF2S3LQ2VIR3 472 aaKnown RBP12.4□□□□□ -0.42
SGCE-203ENST00000425444 ATP1A1-AS1Q5TC04 95 aa12.4□□□□□ -0.42
SGCE-203ENST00000425444 CACHD1Q5VU97 1274 aa12.4□□□□□ -0.42
SGCE-203ENST00000425444 C16orf46Q6P387 395 aa12.4□□□□□ -0.42
SGCE-203ENST00000425444 ZNF449Q6P9G9 518 aa12.4□□□□□ -0.42
SGCE-203ENST00000425444 UNC5BQ8IZJ1 945 aa12.4□□□□□ -0.42
SGCE-203ENST00000425444 LILRA3Q8N6C8 439 aaPredicted RBP12.4□□□□□ -0.42
SGCE-203ENST00000425444 BMPERQ8N8U9 685 aa12.4□□□□□ -0.42
SGCE-203ENST00000425444 GLIS1Q8NBF1 620 aa12.4□□□□□ -0.42
SGCE-203ENST00000425444 SPDYE1Q8NFV5 336 aaPredicted RBP12.4□□□□□ -0.42
SGCE-203ENST00000425444 INSM2Q96T92 566 aaPredicted RBP12.4□□□□□ -0.42
SGCE-203ENST00000425444 ZPBPQ9BS86 351 aa12.4□□□□□ -0.42
SGCE-203ENST00000425444 TLR10Q9BXR5 811 aa12.4□□□□□ -0.42
SGCE-203ENST00000425444 APMAPQ9HDC9 416 aa12.4□□□□□ -0.42
SGCE-203ENST00000425444 ZKSCAN5Q9Y2L8 839 aa12.4□□□□□ -0.42
SGCE-203ENST00000425444 HEBP2Q9Y5Z4 205 aa12.4□□□□□ -0.42
SGCE-203ENST00000425444 DCHS2Q6V1P9 2916 aa12.4□□□□□ -0.42
SGCE-203ENST00000425444 MED13LQ71F56 2210 aa12.39□□□□□ -0.43
SGCE-203ENST00000425444 IGLV3-16A0A075B6K0 115 aa12.39□□□□□ -0.43
SGCE-203ENST00000425444 TRBV5-4A0A0C4DH59 114 aa12.39□□□□□ -0.43
SGCE-203ENST00000425444 MROH6A6NGR9 719 aa12.39□□□□□ -0.43
SGCE-203ENST00000425444 OR51F1A6NGY5 319 aa12.39□□□□□ -0.43
SGCE-203ENST00000425444 IFRD1O00458 451 aaPredicted RBP12.39□□□□□ -0.43
SGCE-203ENST00000425444 TOX3O15405 576 aaPredicted RBP12.39□□□□□ -0.43
SGCE-203ENST00000425444 SGTAO43765 313 aa12.39□□□□□ -0.43
SGCE-203ENST00000425444 TCN2P20062 427 aa12.39□□□□□ -0.43
SGCE-203ENST00000425444 GRIA1P42261 906 aa12.39□□□□□ -0.43
SGCE-203ENST00000425444 PRAMEP78395 509 aa12.39□□□□□ -0.43
SGCE-203ENST00000425444 SIX1Q15475 284 aaPredicted RBP12.39□□□□□ -0.43
SGCE-203ENST00000425444 DBN1Q16643 649 aa12.39□□□□□ -0.43
SGCE-203ENST00000425444 DNTTIP2Q5QJE6 756 aaKnown RBP12.39□□□□□ -0.43
SGCE-203ENST00000425444 ARMC6Q6NXE6 501 aa12.39□□□□□ -0.43
SGCE-203ENST00000425444 AFTPHQ6ULP2 937 aa12.39□□□□□ -0.43
SGCE-203ENST00000425444 PRSS42Q7Z5A4 293 aa12.39□□□□□ -0.43
SGCE-203ENST00000425444 OOSP2Q86WS3 158 aa12.39□□□□□ -0.43
SGCE-203ENST00000425444 PIANPQ8IYJ0 282 aa12.39□□□□□ -0.43
SGCE-203ENST00000425444 PPHLN1Q8NEY8 458 aaKnown RBP12.39□□□□□ -0.43
SGCE-203ENST00000425444 STARD8Q92502 1023 aa12.39□□□□□ -0.43
SGCE-203ENST00000425444 RMDN2Q96LZ7 410 aa12.39□□□□□ -0.43
SGCE-203ENST00000425444 TTC1Q99614 292 aa12.39□□□□□ -0.43
SGCE-203ENST00000425444 CCM2Q9BSQ5 444 aa12.39□□□□□ -0.43
SGCE-203ENST00000425444 EFHD1Q9BUP0 239 aa12.39□□□□□ -0.43
SGCE-203ENST00000425444 COG4Q9H9E3 785 aa12.39□□□□□ -0.43
SGCE-203ENST00000425444 GRPEL1Q9HAV7 217 aa12.39□□□□□ -0.43
SGCE-203ENST00000425444 FBXO8Q9NRD0 319 aa12.39□□□□□ -0.43
SGCE-203ENST00000425444 COLEC10Q9Y6Z7 277 aa12.39□□□□□ -0.43
SGCE-203ENST00000425444 SVILO95425 2214 aa12.39□□□□□ -0.43
SGCE-203ENST00000425444 LOC101059948A0A1B0GTJ6 334 aa12.38□□□□□ -0.43
SGCE-203ENST00000425444 C17orf113A0A1B0GUU1 675 aa12.38□□□□□ -0.43
SGCE-203ENST00000425444 CCDC162PA2VCL2 907 aa12.38□□□□□ -0.43
SGCE-203ENST00000425444 GOLGA6L3A6NEY3 463 aa12.38□□□□□ -0.43
SGCE-203ENST00000425444 QSOX1O00391 747 aa12.38□□□□□ -0.43
SGCE-203ENST00000425444 KIF1CO43896 1103 aaKnown RBP12.38□□□□□ -0.43
SGCE-203ENST00000425444 STK17BO94768 372 aa12.38□□□□□ -0.43
SGCE-203ENST00000425444 AP2A2O94973 939 aa12.38□□□□□ -0.43
SGCE-203ENST00000425444 ADRA1DP25100 572 aa12.38□□□□□ -0.43
SGCE-203ENST00000425444 NDUFS1P28331 727 aa12.38□□□□□ -0.43
SGCE-203ENST00000425444 RPL22P35268 128 aaKnown RBP12.38□□□□□ -0.43
SGCE-203ENST00000425444 NSG1P42857 185 aa12.38□□□□□ -0.43
SGCE-203ENST00000425444 ARL4DP49703 201 aa12.38□□□□□ -0.43
SGCE-203ENST00000425444 ITIH4Q14624 930 aa12.38□□□□□ -0.43
SGCE-203ENST00000425444 SYTL3Q4VX76 610 aa12.38□□□□□ -0.43
SGCE-203ENST00000425444 TSTD2Q5T7W7 516 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms