RNA–Protein interactions for RNA: ENST00000424443.7

TSPAN3-203, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-203ENST00000424443 VRK3Q8IV63 474 aa24.77■■□□□ 1.56
TSPAN3-203ENST00000424443 SIDT2Q8NBJ9 832 aaKnown RBP24.77■■□□□ 1.56
TSPAN3-203ENST00000424443 PHC3Q8NDX5 983 aa24.77■■□□□ 1.56
TSPAN3-203ENST00000424443 CFAP61Q8NHU2 1237 aa24.77■■□□□ 1.56
TSPAN3-203ENST00000424443 FOPNLQ96NB1 174 aa24.77■■□□□ 1.56
TSPAN3-203ENST00000424443 GPR21Q99679 349 aa24.77■■□□□ 1.56
TSPAN3-203ENST00000424443 TRIT1Q9H3H1 467 aaKnown RBP24.77■■□□□ 1.56
TSPAN3-203ENST00000424443 CDC42EP4Q9H3Q1 356 aaKnown RBP24.77■■□□□ 1.56
TSPAN3-203ENST00000424443 KIR3DX1Q9H7L2 352 aa24.77■■□□□ 1.56
TSPAN3-203ENST00000424443 NINJ2Q9NZG7 142 aa24.77■■□□□ 1.56
TSPAN3-203ENST00000424443 PSAT1Q9Y617 370 aa24.77■■□□□ 1.56
TSPAN3-203ENST00000424443 FAM159BA6NKW6 160 aa24.76■■□□□ 1.55
TSPAN3-203ENST00000424443 D6RAR5 112 aa24.76■■□□□ 1.55
TSPAN3-203ENST00000424443 RPN2P04844 631 aa24.76■■□□□ 1.55
TSPAN3-203ENST00000424443 ACADLP28330 430 aa24.76■■□□□ 1.55
TSPAN3-203ENST00000424443 CD1CP29017 333 aa24.76■■□□□ 1.55
TSPAN3-203ENST00000424443 SKIV2L2P42285 1042 aaKnown RBP24.76■■□□□ 1.55
TSPAN3-203ENST00000424443 CLCN7P51798 805 aa24.76■■□□□ 1.55
TSPAN3-203ENST00000424443 ABRQ12979 859 aa24.76■■□□□ 1.55
TSPAN3-203ENST00000424443 CLPPQ16740 277 aaPredicted RBP24.76■■□□□ 1.55
TSPAN3-203ENST00000424443 FAM45BPQ6NSW5 357 aa24.76■■□□□ 1.55
TSPAN3-203ENST00000424443 FAM45AQ8TCE6 357 aa24.76■■□□□ 1.55
TSPAN3-203ENST00000424443 NCSTNQ92542 709 aa24.76■■□□□ 1.55
TSPAN3-203ENST00000424443 INPP5DQ92835 1189 aa24.76■■□□□ 1.55
TSPAN3-203ENST00000424443 CPNE1Q99829 537 aa24.76■■□□□ 1.55
TSPAN3-203ENST00000424443 DPYSL5Q9BPU6 564 aa24.76■■□□□ 1.55
TSPAN3-203ENST00000424443 RDH14Q9HBH5 336 aa24.76■■□□□ 1.55
TSPAN3-203ENST00000424443 SMYD2Q9NRG4 433 aa24.76■■□□□ 1.55
TSPAN3-203ENST00000424443 KLHL42Q9P2K6 505 aa24.76■■□□□ 1.55
TSPAN3-203ENST00000424443 GALPQ9UBC7 116 aa24.76■■□□□ 1.55
TSPAN3-203ENST00000424443 DHRS7Q9Y394 339 aa24.76■■□□□ 1.55
TSPAN3-203ENST00000424443 CASC3O15234 703 aaKnown RBP24.76■■□□□ 1.55
TSPAN3-203ENST00000424443 KDM1AO60341 852 aa24.76■■□□□ 1.55
TSPAN3-203ENST00000424443 PIAS1O75925 651 aa24.76■■□□□ 1.55
TSPAN3-203ENST00000424443 KBTBD12Q3ZCT8 623 aa24.76■■□□□ 1.55
TSPAN3-203ENST00000424443 RBM20Q5T481 1227 aaKnown RBP24.76■■□□□ 1.55
TSPAN3-203ENST00000424443 CDCP2Q5VXM1 449 aa24.76■■□□□ 1.55
TSPAN3-203ENST00000424443 TTC23LQ6PF05 361 aa24.76■■□□□ 1.55
TSPAN3-203ENST00000424443 KLHL35Q6PF15 583 aa24.76■■□□□ 1.55
TSPAN3-203ENST00000424443 TBC1D21Q8IYX1 336 aa24.76■■□□□ 1.55
TSPAN3-203ENST00000424443 PPM1NQ8N819 430 aa24.76■■□□□ 1.55
TSPAN3-203ENST00000424443 EIF1ADQ8N9N8 165 aaKnown RBP24.76■■□□□ 1.55
TSPAN3-203ENST00000424443 ACVR1CQ8NER5 493 aa24.76■■□□□ 1.55
TSPAN3-203ENST00000424443 HGH1Q9BTY7 390 aa24.76■■□□□ 1.55
TSPAN3-203ENST00000424443 SCNM1Q9BWG6 230 aa24.76■■□□□ 1.55
TSPAN3-203ENST00000424443 POLG2Q9UHN1 485 aa24.76■■□□□ 1.55
TSPAN3-203ENST00000424443 TSR3Q9UJK0 312 aaKnown RBP24.76■■□□□ 1.55
TSPAN3-203ENST00000424443 FAM149AA5PLN7 773 aa24.75■■□□□ 1.55
TSPAN3-203ENST00000424443 CXorf49A8MYA2 514 aaPredicted RBP24.75■■□□□ 1.55
TSPAN3-203ENST00000424443 ACSL3O95573 720 aa24.75■■□□□ 1.55
TSPAN3-203ENST00000424443 TOP3BO95985 862 aaKnown RBP24.75■■□□□ 1.55
TSPAN3-203ENST00000424443 PROS1P07225 676 aa24.75■■□□□ 1.55
TSPAN3-203ENST00000424443 TYRP1P17643 537 aa24.75■■□□□ 1.55
TSPAN3-203ENST00000424443 ATP5DP30049 168 aa24.75■■□□□ 1.55
TSPAN3-203ENST00000424443 PRKG2Q13237 762 aa24.75■■□□□ 1.55
TSPAN3-203ENST00000424443 NAB1Q13506 487 aa24.75■■□□□ 1.55
TSPAN3-203ENST00000424443 HECTD2Q5U5R9 776 aa24.75■■□□□ 1.55
TSPAN3-203ENST00000424443 ZC3HC1Q86WB0 502 aaKnown RBP24.75■■□□□ 1.55
TSPAN3-203ENST00000424443 CACTIN-AS1Q8N1I8 211 aa24.75■■□□□ 1.55
TSPAN3-203ENST00000424443 OR5AR1Q8NGP9 310 aa24.75■■□□□ 1.55
TSPAN3-203ENST00000424443 UBXN4Q92575 508 aa24.75■■□□□ 1.55
TSPAN3-203ENST00000424443 ELMO2Q96JJ3 720 aa24.75■■□□□ 1.55
TSPAN3-203ENST00000424443 TMEM74Q96NL1 305 aa24.75■■□□□ 1.55
TSPAN3-203ENST00000424443 RHOJQ9H4E5 214 aa24.75■■□□□ 1.55
TSPAN3-203ENST00000424443 SLC24A2Q9UI40 661 aa24.75■■□□□ 1.55
TSPAN3-203ENST00000424443 TDRKHQ9Y2W6 561 aaKnown RBP24.75■■□□□ 1.55
TSPAN3-203ENST00000424443 VWA7Q9Y334 891 aa24.75■■□□□ 1.55
TSPAN3-203ENST00000424443 UNC13CQ8NB66 2214 aa24.74■■□□□ 1.55
TSPAN3-203ENST00000424443 MED19A0JLT2 244 aaPredicted RBP24.74■■□□□ 1.55
TSPAN3-203ENST00000424443 CSO75390 466 aaKnown RBP24.74■■□□□ 1.55
TSPAN3-203ENST00000424443 TARDBPQ13148 414 aaKnown RBP eCLIP24.74■■□□□ 1.554e-14■■□□□ 14.4
TSPAN3-203ENST00000424443 PDAP1Q13442 181 aaKnown RBP24.74■■□□□ 1.55
TSPAN3-203ENST00000424443 ACSBG2Q5FVE4 666 aa24.74■■□□□ 1.55
TSPAN3-203ENST00000424443 UNC5DQ6UXZ4 953 aa24.74■■□□□ 1.55
TSPAN3-203ENST00000424443 DCBLD1Q8N8Z6 715 aa24.74■■□□□ 1.55
TSPAN3-203ENST00000424443 OR5K2Q8NHB8 316 aa24.74■■□□□ 1.55
TSPAN3-203ENST00000424443 CD200R1Q8TD46 325 aa24.74■■□□□ 1.55
TSPAN3-203ENST00000424443 JPH3Q8WXH2 748 aaPredicted RBP24.74■■□□□ 1.55
TSPAN3-203ENST00000424443 MED16Q9Y2X0 877 aa24.74■■□□□ 1.55
TSPAN3-203ENST00000424443 CACNA1AO00555 2505 aa24.74■■□□□ 1.55
TSPAN3-203ENST00000424443 SPEGQ15772 3267 aa24.73■■□□□ 1.55
TSPAN3-203ENST00000424443 ENO3P13929 434 aaPredicted RBP24.73■■□□□ 1.55
TSPAN3-203ENST00000424443 SPINK2P20155 84 aa24.73■■□□□ 1.55
TSPAN3-203ENST00000424443 SAT1P21673 171 aa24.73■■□□□ 1.55
TSPAN3-203ENST00000424443 GP5P40197 560 aa24.73■■□□□ 1.55
TSPAN3-203ENST00000424443 RGS4P49798 205 aa24.73■■□□□ 1.55
TSPAN3-203ENST00000424443 SQSTM1Q13501 440 aa24.73■■□□□ 1.55
TSPAN3-203ENST00000424443 KLHL38Q2WGJ6 581 aa24.73■■□□□ 1.55
TSPAN3-203ENST00000424443 PLXDC1Q8IUK5 500 aa24.73■■□□□ 1.55
TSPAN3-203ENST00000424443 LCN9Q8WX39 176 aa24.73■■□□□ 1.55
TSPAN3-203ENST00000424443 CYTH2Q99418 400 aa24.73■■□□□ 1.55
TSPAN3-203ENST00000424443 SLC30A3Q99726 388 aa24.73■■□□□ 1.55
TSPAN3-203ENST00000424443 NUDT22Q9BRQ3 303 aa24.73■■□□□ 1.55
TSPAN3-203ENST00000424443 KLK13Q9UKR3 277 aa24.73■■□□□ 1.55
TSPAN3-203ENST00000424443 ANGPTL2Q9UKU9 493 aa24.73■■□□□ 1.55
TSPAN3-203ENST00000424443 FAM95CA0A1B0GW59 222 aa24.72■■□□□ 1.55
TSPAN3-203ENST00000424443 TMX2-CTNND1H3BSU7 103 aa24.72■■□□□ 1.55
TSPAN3-203ENST00000424443 CBSLP0DN79 551 aa24.72■■□□□ 1.55
TSPAN3-203ENST00000424443 CBSP35520 551 aa24.72■■□□□ 1.55
TSPAN3-203ENST00000424443 SLC12A2P55011 1212 aa24.72■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms