RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 DMRT3Q9NQL9 472 aa6.09□□□□□ -1.43
SDCBP-203ENST00000424270 FANCLQ9NW38 375 aa6.09□□□□□ -1.43
SDCBP-203ENST00000424270 BEX4Q9NWD9 120 aaPredicted RBP6.09□□□□□ -1.43
SDCBP-203ENST00000424270 FAM8A1Q9UBU6 413 aa6.09□□□□□ -1.43
SDCBP-203ENST00000424270 APEX2Q9UBZ4 518 aa6.09□□□□□ -1.43
SDCBP-203ENST00000424270 TEKT2Q9UIF3 430 aa6.09□□□□□ -1.43
SDCBP-203ENST00000424270 PCDHGC3Q9UN70 934 aa6.09□□□□□ -1.43
SDCBP-203ENST00000424270 WDR37Q9Y2I8 494 aa6.09□□□□□ -1.43
SDCBP-203ENST00000424270 HS3ST3B1Q9Y662 390 aa6.09□□□□□ -1.43
SDCBP-203ENST00000424270 MORC2Q9Y6X9 1032 aaPredicted RBP6.09□□□□□ -1.43
SDCBP-203ENST00000424270 A6NNC1 897 aa6.08□□□□□ -1.44
SDCBP-203ENST00000424270 A8MUI8 341 aa6.08□□□□□ -1.44
SDCBP-203ENST00000424270 MATN2O00339 956 aa6.08□□□□□ -1.44
SDCBP-203ENST00000424270 CES2O00748 559 aa6.08□□□□□ -1.44
SDCBP-203ENST00000424270 P4HA2O15460 535 aa6.08□□□□□ -1.44
SDCBP-203ENST00000424270 CDC40O60508 579 aaKnown RBP eCLIP6.08□□□□□ -1.44
SDCBP-203ENST00000424270 SMPD2O60906 423 aa6.08□□□□□ -1.44
SDCBP-203ENST00000424270 CNOT3O75175 753 aaKnown RBP6.08□□□□□ -1.44
SDCBP-203ENST00000424270 MTX2O75431 263 aa6.08□□□□□ -1.44
SDCBP-203ENST00000424270 ST6GAL1P15907 406 aa6.08□□□□□ -1.44
SDCBP-203ENST00000424270 DESP17661 470 aa6.08□□□□□ -1.44
SDCBP-203ENST00000424270 FDXRP22570 491 aa6.08□□□□□ -1.44
SDCBP-203ENST00000424270 CXCR2P25025 360 aa6.08□□□□□ -1.44
SDCBP-203ENST00000424270 PTGS2P35354 604 aa6.08□□□□□ -1.44
SDCBP-203ENST00000424270 HSPA9P38646 679 aaKnown RBP6.08□□□□□ -1.44
SDCBP-203ENST00000424270 STC1P52823 247 aa6.08□□□□□ -1.44
SDCBP-203ENST00000424270 MAXP61244 160 aa6.08□□□□□ -1.44
SDCBP-203ENST00000424270 TFF3Q07654 80 aa6.08□□□□□ -1.44
SDCBP-203ENST00000424270 IL10RBQ08334 325 aa6.08□□□□□ -1.44
SDCBP-203ENST00000424270 SLC10A7Q0GE19 358 aa6.08□□□□□ -1.44
SDCBP-203ENST00000424270 PMPCAQ10713 525 aa6.08□□□□□ -1.44
SDCBP-203ENST00000424270 RABEP1Q15276 862 aa6.08□□□□□ -1.44
SDCBP-203ENST00000424270 FILIP1LQ4L180 1135 aa6.08□□□□□ -1.44
SDCBP-203ENST00000424270 ZCWPW2Q504Y3 356 aa6.08□□□□□ -1.44
SDCBP-203ENST00000424270 ZNF385CQ66K41 422 aaPredicted RBP6.08□□□□□ -1.44
SDCBP-203ENST00000424270 RHBDD2Q6NTF9 364 aa6.08□□□□□ -1.44
SDCBP-203ENST00000424270 TTI2Q6NXR4 508 aa6.08□□□□□ -1.44
SDCBP-203ENST00000424270 MRPL14Q6P1L8 145 aaKnown RBP6.08□□□□□ -1.44
SDCBP-203ENST00000424270 WASH2PQ6VEQ5 465 aa6.08□□□□□ -1.44
SDCBP-203ENST00000424270 CDHR3Q6ZTQ4 885 aa6.08□□□□□ -1.44
SDCBP-203ENST00000424270 TTLL10Q6ZVT0 673 aa6.08□□□□□ -1.44
SDCBP-203ENST00000424270 NEK10Q6ZWH5 1172 aa6.08□□□□□ -1.44
SDCBP-203ENST00000424270 C11orf96Q7Z7L8 435 aa6.08□□□□□ -1.44
SDCBP-203ENST00000424270 NLRP8Q86W28 1048 aa6.08□□□□□ -1.44
SDCBP-203ENST00000424270 CREBRFQ8IUR6 639 aa6.08□□□□□ -1.44
SDCBP-203ENST00000424270 TMEM151BQ8IW70 566 aa6.08□□□□□ -1.44
SDCBP-203ENST00000424270 GPT2Q8TD30 523 aa6.08□□□□□ -1.44
SDCBP-203ENST00000424270 RXFP2Q8WXD0 754 aa6.08□□□□□ -1.44
SDCBP-203ENST00000424270 DLG3Q92796 817 aa6.08□□□□□ -1.44
SDCBP-203ENST00000424270 C8orf44Q96CB5 159 aa6.08□□□□□ -1.44
SDCBP-203ENST00000424270 ZNF653Q96CK0 615 aa6.08□□□□□ -1.44
SDCBP-203ENST00000424270 FAM81BQ96LP2 452 aa6.08□□□□□ -1.44
SDCBP-203ENST00000424270 C12orf66Q96MD2 445 aa6.08□□□□□ -1.44
SDCBP-203ENST00000424270 SMIM14Q96QK8 99 aa6.08□□□□□ -1.44
SDCBP-203ENST00000424270 PSKH2Q96QS6 385 aa6.08□□□□□ -1.44
SDCBP-203ENST00000424270 MCCC1Q96RQ3 725 aaPredicted RBP6.08□□□□□ -1.44
SDCBP-203ENST00000424270 NUDCD1Q96RS6 583 aa6.08□□□□□ -1.44
SDCBP-203ENST00000424270 SLC6A16Q9GZN6 736 aa6.08□□□□□ -1.44
SDCBP-203ENST00000424270 SPRTNQ9H040 489 aaPredicted RBP6.08□□□□□ -1.44
SDCBP-203ENST00000424270 SRMSQ9H3Y6 488 aa6.08□□□□□ -1.44
SDCBP-203ENST00000424270 NXT1Q9UKK6 140 aaKnown RBP6.08□□□□□ -1.44
SDCBP-203ENST00000424270 CNOT6Q9ULM6 557 aaKnown RBP6.08□□□□□ -1.44
SDCBP-203ENST00000424270 NEU3Q9UQ49 428 aa6.08□□□□□ -1.44
SDCBP-203ENST00000424270 CNTN6Q9UQ52 1028 aa6.08□□□□□ -1.44
SDCBP-203ENST00000424270 MTMR6Q9Y217 621 aa6.08□□□□□ -1.44
SDCBP-203ENST00000424270 L3MBTL1Q9Y468 752 aa6.08□□□□□ -1.44
SDCBP-203ENST00000424270 TTLL3Q9Y4R7 772 aa6.08□□□□□ -1.44
SDCBP-203ENST00000424270 CACNA1CQ13936 2221 aa6.08□□□□□ -1.44
SDCBP-203ENST00000424270 DOCK4Q8N1I0 1966 aa6.07□□□□□ -1.44
SDCBP-203ENST00000424270 ANKRD62A6NC57 917 aa6.07□□□□□ -1.44
SDCBP-203ENST00000424270 TRIM64A6NGJ6 449 aa6.07□□□□□ -1.44
SDCBP-203ENST00000424270 TRIM64BA6NI03 449 aa6.07□□□□□ -1.44
SDCBP-203ENST00000424270 C3orf80F5H4A9 247 aa6.07□□□□□ -1.44
SDCBP-203ENST00000424270 RASGRF2O14827 1237 aa6.07□□□□□ -1.44
SDCBP-203ENST00000424270 KCNAB3O43448 404 aa6.07□□□□□ -1.44
SDCBP-203ENST00000424270 ZRANB2O95218 330 aaKnown RBP eCLIP6.07□□□□□ -1.44
SDCBP-203ENST00000424270 SIX3O95343 332 aaPredicted RBP6.07□□□□□ -1.44
SDCBP-203ENST00000424270 YEATS4O95619 227 aa6.07□□□□□ -1.44
SDCBP-203ENST00000424270 TP53P04637 393 aaPredicted RBP6.07□□□□□ -1.44
SDCBP-203ENST00000424270 SLC35G4P0C7Q5 338 aa6.07□□□□□ -1.44
SDCBP-203ENST00000424270 PRR35P0CG20 571 aa6.07□□□□□ -1.44
SDCBP-203ENST00000424270 MTHFD1P11586 935 aaKnown RBP6.07□□□□□ -1.44
SDCBP-203ENST00000424270 CD46P15529 392 aa6.07□□□□□ -1.44
SDCBP-203ENST00000424270 ZNF24P17028 368 aa6.07□□□□□ -1.44
SDCBP-203ENST00000424270 MX2P20592 715 aa6.07□□□□□ -1.44
SDCBP-203ENST00000424270 SYT1P21579 422 aa6.07□□□□□ -1.44
SDCBP-203ENST00000424270 UGT1A1P22309 533 aa6.07□□□□□ -1.44
SDCBP-203ENST00000424270 CA4P22748 312 aa6.07□□□□□ -1.44
SDCBP-203ENST00000424270 CARSP49589 748 aaKnown RBP6.07□□□□□ -1.44
SDCBP-203ENST00000424270 AP2B1P63010 937 aa6.07□□□□□ -1.44
SDCBP-203ENST00000424270 TMPRSS15P98073 1019 aa6.07□□□□□ -1.44
SDCBP-203ENST00000424270 OC90Q02509 493 aaPredicted RBP6.07□□□□□ -1.44
SDCBP-203ENST00000424270 EEF1A2Q05639 463 aaKnown RBP6.07□□□□□ -1.44
SDCBP-203ENST00000424270 CCDC14Q49A88 953 aa6.07□□□□□ -1.44
SDCBP-203ENST00000424270 ANKRD20A8PQ5CZ79 823 aa6.07□□□□□ -1.44
SDCBP-203ENST00000424270 CATSPEREQ5SY80 951 aa6.07□□□□□ -1.44
SDCBP-203ENST00000424270 C10orf62Q5T681 223 aaPredicted RBP6.07□□□□□ -1.44
SDCBP-203ENST00000424270 FOXD4L5Q5VV16 416 aaPredicted RBP6.07□□□□□ -1.44
SDCBP-203ENST00000424270 TAF3Q5VWG9 929 aa6.07□□□□□ -1.44
SDCBP-203ENST00000424270 RESP18Q5W5W9 173 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms