RNA–Protein interactions for RNA: ENST00000422770.5

HERC3-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 4

Gene HERC3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-204ENST00000422770 KRT222Q8N1A0 295 aa9.45□□□□□ -0.9
HERC3-204ENST00000422770 AGGF1Q8N302 714 aaeCLIP9.45□□□□□ -0.9
HERC3-204ENST00000422770 KDF1Q8NAX2 398 aaPredicted RBP9.45□□□□□ -0.9
HERC3-204ENST00000422770 OR4D9Q8NGE8 314 aa9.45□□□□□ -0.9
HERC3-204ENST00000422770 CFAP61Q8NHU2 1237 aa9.45□□□□□ -0.9
HERC3-204ENST00000422770 PYROXD1Q8WU10 500 aa9.45□□□□□ -0.9
HERC3-204ENST00000422770 ANKRD7Q92527 254 aa9.45□□□□□ -0.9
HERC3-204ENST00000422770 RSC1A1Q92681 617 aa9.45□□□□□ -0.9
HERC3-204ENST00000422770 PEX13Q92968 403 aa9.45□□□□□ -0.9
HERC3-204ENST00000422770 FAM136AQ96C01 138 aa9.45□□□□□ -0.9
HERC3-204ENST00000422770 DPYSL5Q9BPU6 564 aa9.45□□□□□ -0.9
HERC3-204ENST00000422770 HGH1Q9BTY7 390 aa9.45□□□□□ -0.9
HERC3-204ENST00000422770 TSPYL1Q9H0U9 437 aa9.45□□□□□ -0.9
HERC3-204ENST00000422770 SLC40A1Q9NP59 571 aa9.45□□□□□ -0.9
HERC3-204ENST00000422770 THSD1Q9NS62 852 aa9.45□□□□□ -0.9
HERC3-204ENST00000422770 C20orf96Q9NUD7 363 aaPredicted RBP9.45□□□□□ -0.9
HERC3-204ENST00000422770 ZC3H7BQ9UGR2 993 aaKnown RBP9.45□□□□□ -0.9
HERC3-204ENST00000422770 GNPTGQ9UJJ9 305 aa9.45□□□□□ -0.9
HERC3-204ENST00000422770 TDRKHQ9Y2W6 561 aaKnown RBP9.45□□□□□ -0.9
HERC3-204ENST00000422770 HEBP2Q9Y5Z4 205 aa9.45□□□□□ -0.9
HERC3-204ENST00000422770 COLEC10Q9Y6Z7 277 aa9.45□□□□□ -0.9
HERC3-204ENST00000422770 SPEGQ15772 3267 aa9.45□□□□□ -0.9
HERC3-204ENST00000422770 BPTFQ12830 3046 aa9.45□□□□□ -0.9
HERC3-204ENST00000422770 ADAMTS20P59510 1910 aa9.44□□□□□ -0.9
HERC3-204ENST00000422770 KNTC1P50748 2209 aa9.44□□□□□ -0.9
HERC3-204ENST00000422770 C17orf113A0A1B0GUU1 675 aa9.44□□□□□ -0.9
HERC3-204ENST00000422770 FAM237BA0A1B0GVD1 139 aa9.44□□□□□ -0.9
HERC3-204ENST00000422770 A0A1W2PNU3 283 aaPredicted RBP9.44□□□□□ -0.9
HERC3-204ENST00000422770 EFCAB7A8K855 629 aa9.44□□□□□ -0.9
HERC3-204ENST00000422770 IQCF5A8MTL0 148 aa9.44□□□□□ -0.9
HERC3-204ENST00000422770 E5RI56 91 aa9.44□□□□□ -0.9
HERC3-204ENST00000422770 PRMT5O14744 637 aaPredicted RBP9.44□□□□□ -0.9
HERC3-204ENST00000422770 LIN7AO14910 233 aaPredicted RBP9.44□□□□□ -0.9
HERC3-204ENST00000422770 RRP8O43159 456 aaKnown RBP9.44□□□□□ -0.9
HERC3-204ENST00000422770 APOA4P06727 396 aa9.44□□□□□ -0.9
HERC3-204ENST00000422770 F7P08709 466 aaPredicted RBP9.44□□□□□ -0.9
HERC3-204ENST00000422770 PDHA2P29803 388 aa9.44□□□□□ -0.9
HERC3-204ENST00000422770 FMO4P31512 558 aa9.44□□□□□ -0.9
HERC3-204ENST00000422770 SEPHS1P49903 392 aa9.44□□□□□ -0.9
HERC3-204ENST00000422770 LIMK2P53671 638 aa9.44□□□□□ -0.9
HERC3-204ENST00000422770 PCBP4P57723 403 aaKnown RBP9.44□□□□□ -0.9
HERC3-204ENST00000422770 HSPA14Q0VDF9 509 aa9.44□□□□□ -0.9
HERC3-204ENST00000422770 PRKG2Q13237 762 aa9.44□□□□□ -0.9
HERC3-204ENST00000422770 CRYMQ14894 314 aa9.44□□□□□ -0.9
HERC3-204ENST00000422770 EFTUD2Q15029 972 aaKnown RBP eCLIP9.44□□□□□ -0.9
HERC3-204ENST00000422770 UAP1Q16222 522 aaPredicted RBP9.44□□□□□ -0.9
HERC3-204ENST00000422770 CLPPQ16740 277 aaPredicted RBP9.44□□□□□ -0.9
HERC3-204ENST00000422770 LONRF1Q17RB8 773 aa9.44□□□□□ -0.9
HERC3-204ENST00000422770 TBC1D25Q3MII6 688 aa9.44□□□□□ -0.9
HERC3-204ENST00000422770 ANKRD20A4Q4UJ75 823 aa9.44□□□□□ -0.9
HERC3-204ENST00000422770 KIAA0930Q6ICG6 404 aaPredicted RBP9.44□□□□□ -0.9
HERC3-204ENST00000422770 KLHL35Q6PF15 583 aa9.44□□□□□ -0.9
HERC3-204ENST00000422770 ZNF574Q6ZN55 896 aaPredicted RBP9.44□□□□□ -0.9
HERC3-204ENST00000422770 FAM92BQ6ZTR7 304 aa9.44□□□□□ -0.9
HERC3-204ENST00000422770 IGDCC3Q8IVU1 814 aa9.44□□□□□ -0.9
HERC3-204ENST00000422770 AGBL5Q8NDL9 886 aa9.44□□□□□ -0.9
HERC3-204ENST00000422770 PHC3Q8NDX5 983 aa9.44□□□□□ -0.9
HERC3-204ENST00000422770 LKAAEAR1Q8TD35 194 aa9.44□□□□□ -0.9
HERC3-204ENST00000422770 LRRC39Q96DD0 335 aa9.44□□□□□ -0.9
HERC3-204ENST00000422770 PRR11Q96HE9 360 aaPredicted RBP9.44□□□□□ -0.9
HERC3-204ENST00000422770 LINC00615Q96LM1 132 aaPredicted RBP9.44□□□□□ -0.9
HERC3-204ENST00000422770 ZNF578Q96N58 590 aaPredicted RBP9.44□□□□□ -0.9
HERC3-204ENST00000422770 RUFY1Q96T51 708 aa9.44□□□□□ -0.9
HERC3-204ENST00000422770 CCDC68Q9H2F9 335 aa9.44□□□□□ -0.9
HERC3-204ENST00000422770 EPB41L1Q9H4G0 881 aa9.44□□□□□ -0.9
HERC3-204ENST00000422770 PPANQ9NQ55 473 aaKnown RBP9.44□□□□□ -0.9
HERC3-204ENST00000422770 ASF1AQ9Y294 204 aa9.44□□□□□ -0.9
HERC3-204ENST00000422770 CRYL1Q9Y2S2 319 aa9.44□□□□□ -0.9
HERC3-204ENST00000422770 AKAP13Q12802 2813 aa9.43□□□□□ -0.9
HERC3-204ENST00000422770 MAGEB16A2A368 324 aa9.43□□□□□ -0.9
HERC3-204ENST00000422770 GSAPA4D1B5 854 aa9.43□□□□□ -0.9
HERC3-204ENST00000422770 OR6C74A6NCV1 312 aa9.43□□□□□ -0.9
HERC3-204ENST00000422770 PRR19A6NJB7 356 aa9.43□□□□□ -0.9
HERC3-204ENST00000422770 SMIM23A6NLE4 172 aa9.43□□□□□ -0.9
HERC3-204ENST00000422770 SRRM3A6NNA2 597 aaPredicted RBP9.43□□□□□ -0.9
HERC3-204ENST00000422770 HGSO14964 777 aaPredicted RBP9.43□□□□□ -0.9
HERC3-204ENST00000422770 CAPN5O15484 640 aaPredicted RBP9.43□□□□□ -0.9
HERC3-204ENST00000422770 RIPK2O43353 540 aa9.43□□□□□ -0.9
HERC3-204ENST00000422770 TLX3O43711 291 aaPredicted RBP9.43□□□□□ -0.9
HERC3-204ENST00000422770 USP1O94782 785 aa9.43□□□□□ -0.9
HERC3-204ENST00000422770 ITGA2BP08514 1039 aa9.43□□□□□ -0.9
HERC3-204ENST00000422770 GSTM1P09488 218 aa9.43□□□□□ -0.9
HERC3-204ENST00000422770 THRAP10827 490 aa9.43□□□□□ -0.9
HERC3-204ENST00000422770 CCL4P13236 92 aa9.43□□□□□ -0.9
HERC3-204ENST00000422770 PSMA3P25788 255 aa9.43□□□□□ -0.9
HERC3-204ENST00000422770 NDUFS1P28331 727 aa9.43□□□□□ -0.9
HERC3-204ENST00000422770 SLC5A2P31639 672 aa9.43□□□□□ -0.9
HERC3-204ENST00000422770 PHBP35232 272 aa9.43□□□□□ -0.9
HERC3-204ENST00000422770 HSD17B3P37058 310 aa9.43□□□□□ -0.9
HERC3-204ENST00000422770 ETV5P41161 510 aa9.43□□□□□ -0.9
HERC3-204ENST00000422770 CAPZBP47756 277 aa9.43□□□□□ -0.9
HERC3-204ENST00000422770 LEPRP48357 1165 aaKnown RBP9.43□□□□□ -0.9
HERC3-204ENST00000422770 ARL4DP49703 201 aa9.43□□□□□ -0.9
HERC3-204ENST00000422770 GSTM4Q03013 218 aa9.43□□□□□ -0.9
HERC3-204ENST00000422770 CFHR1Q03591 330 aa9.43□□□□□ -0.9
HERC3-204ENST00000422770 ZFP36L1Q07352 338 aaKnown RBP9.43□□□□□ -0.9
HERC3-204ENST00000422770 FOXM1Q08050 763 aa9.43□□□□□ -0.9
HERC3-204ENST00000422770 PRKAA1Q13131 559 aa9.43□□□□□ -0.9
HERC3-204ENST00000422770 RPA4Q13156 261 aa9.43□□□□□ -0.9
HERC3-204ENST00000422770 TRA2AQ13595 282 aaKnown RBP eCLIP9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms