RNA–Protein interactions for RNA: ENST00000421999.7

CMSS1-201, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMSS1, Length 4,330 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-201ENST00000421999 MPSTP25325 297 aa9.57□□□□□ -0.88
CMSS1-201ENST00000421999 HOXD9P28356 352 aaPredicted RBP9.57□□□□□ -0.88
CMSS1-201ENST00000421999 PREPP48147 710 aa9.57□□□□□ -0.88
CMSS1-201ENST00000421999 PGGT1BP53609 377 aa9.57□□□□□ -0.88
CMSS1-201ENST00000421999 RPS7P62081 194 aaKnown RBP9.57□□□□□ -0.88
CMSS1-201ENST00000421999 CLCQ05315 142 aa9.57□□□□□ -0.88
CMSS1-201ENST00000421999 ACAP2Q15057 778 aa9.57□□□□□ -0.88
CMSS1-201ENST00000421999 TIGD2Q4W5G0 525 aa9.57□□□□□ -0.88
CMSS1-201ENST00000421999 MPP7Q5T2T1 576 aa9.57□□□□□ -0.88
CMSS1-201ENST00000421999 SULT1C3Q6IMI6 304 aa9.57□□□□□ -0.88
CMSS1-201ENST00000421999 CYP2R1Q6VVX0 501 aa9.57□□□□□ -0.88
CMSS1-201ENST00000421999 SPRED2Q7Z698 418 aa9.57□□□□□ -0.88
CMSS1-201ENST00000421999 PIM3Q86V86 326 aa9.57□□□□□ -0.88
CMSS1-201ENST00000421999 GKN2Q86XP6 184 aa9.57□□□□□ -0.88
CMSS1-201ENST00000421999 NPAS3Q8IXF0 933 aa9.57□□□□□ -0.88
CMSS1-201ENST00000421999 ATG16L2Q8NAA4 619 aa9.57□□□□□ -0.88
CMSS1-201ENST00000421999 RBM18Q96H35 190 aaKnown RBP9.57□□□□□ -0.88
CMSS1-201ENST00000421999 CCM2Q9BSQ5 444 aa9.57□□□□□ -0.88
CMSS1-201ENST00000421999 WDR55Q9H6Y2 383 aaPredicted RBP9.57□□□□□ -0.88
CMSS1-201ENST00000421999 GEMIN8Q9NWZ8 242 aaKnown RBP9.57□□□□□ -0.88
CMSS1-201ENST00000421999 FETUBQ9UGM5 382 aa9.57□□□□□ -0.88
CMSS1-201ENST00000421999 MAPRE3Q9UPY8 281 aa9.57□□□□□ -0.88
CMSS1-201ENST00000421999 POLR3HQ9Y535 204 aaPredicted RBP9.57□□□□□ -0.88
CMSS1-201ENST00000421999 EIF4E1BA6NMX2 242 aaKnown RBP9.56□□□□□ -0.88
CMSS1-201ENST00000421999 OR4F21O95013 312 aa9.56□□□□□ -0.88
CMSS1-201ENST00000421999 SRPRAP08240 638 aaKnown RBP9.56□□□□□ -0.88
CMSS1-201ENST00000421999 NT5EP21589 574 aa9.56□□□□□ -0.88
CMSS1-201ENST00000421999 CSTF2P33240 577 aaKnown RBP eCLIP9.56□□□□□ -0.88
CMSS1-201ENST00000421999 BUD31P41223 144 aaPredicted RBP9.56□□□□□ -0.88
CMSS1-201ENST00000421999 ARSDP51689 593 aa9.56□□□□□ -0.88
CMSS1-201ENST00000421999 CYP4F3Q08477 520 aa9.56□□□□□ -0.88
CMSS1-201ENST00000421999 ZNF234Q14588 700 aa9.56□□□□□ -0.88
CMSS1-201ENST00000421999 GPAT3Q53EU6 434 aa9.56□□□□□ -0.88
CMSS1-201ENST00000421999 FGD3Q5JSP0 725 aa9.56□□□□□ -0.88
CMSS1-201ENST00000421999 MLIPQ5VWP3 458 aa9.56□□□□□ -0.88
CMSS1-201ENST00000421999 GCNT7Q6ZNI0 430 aa9.56□□□□□ -0.88
CMSS1-201ENST00000421999 R3HCC1LQ7Z5L2 792 aaKnown RBP9.56□□□□□ -0.88
CMSS1-201ENST00000421999 ZC3H7AQ8IWR0 971 aaKnown RBP9.56□□□□□ -0.88
CMSS1-201ENST00000421999 SCUBE1Q8IWY4 988 aa9.56□□□□□ -0.88
CMSS1-201ENST00000421999 TTC29Q8NA56 475 aaPredicted RBP9.56□□□□□ -0.88
CMSS1-201ENST00000421999 PROX1Q92786 737 aa9.56□□□□□ -0.88
CMSS1-201ENST00000421999 FOXJ1Q92949 421 aa9.56□□□□□ -0.88
CMSS1-201ENST00000421999 ZSWIM3Q96MP5 696 aa9.56□□□□□ -0.88
CMSS1-201ENST00000421999 ITM2CQ9NQX7 267 aa9.56□□□□□ -0.88
CMSS1-201ENST00000421999 TTC3P53804 2025 aa9.56□□□□□ -0.88
CMSS1-201ENST00000421999 NUP205Q92621 2012 aa9.56□□□□□ -0.88
CMSS1-201ENST00000421999 BIRC5O15392 142 aa9.56□□□□□ -0.88
CMSS1-201ENST00000421999 ZMPSTE24O75844 475 aa9.56□□□□□ -0.88
CMSS1-201ENST00000421999 CBX6O95503 412 aa9.56□□□□□ -0.88
CMSS1-201ENST00000421999 CAPN1P07384 714 aa9.56□□□□□ -0.88
CMSS1-201ENST00000421999 JUNDP17535 347 aa9.56□□□□□ -0.88
CMSS1-201ENST00000421999 GJA4P35212 333 aa9.56□□□□□ -0.88
CMSS1-201ENST00000421999 CCNFP41002 786 aa9.56□□□□□ -0.88
CMSS1-201ENST00000421999 SLC6A11P48066 632 aa9.56□□□□□ -0.88
CMSS1-201ENST00000421999 ARL13AQ5H913 290 aaPredicted RBP9.56□□□□□ -0.88
CMSS1-201ENST00000421999 CLEC6AQ6EIG7 209 aa9.56□□□□□ -0.88
CMSS1-201ENST00000421999 TMEM135Q86UB9 458 aa9.56□□□□□ -0.88
CMSS1-201ENST00000421999 RELL1Q8IUW5 271 aa9.56□□□□□ -0.88
CMSS1-201ENST00000421999 B4GALNT2Q8NHY0 566 aa9.56□□□□□ -0.88
CMSS1-201ENST00000421999 EXOSC8Q96B26 276 aaKnown RBP9.56□□□□□ -0.88
CMSS1-201ENST00000421999 WDR92Q96MX6 357 aa9.56□□□□□ -0.88
CMSS1-201ENST00000421999 SMIM14Q96QK8 99 aa9.56□□□□□ -0.88
CMSS1-201ENST00000421999 CDRT15Q96T59 188 aa9.56□□□□□ -0.88
CMSS1-201ENST00000421999 MGME1Q9BQP7 344 aa9.56□□□□□ -0.88
CMSS1-201ENST00000421999 CABIN1Q9Y6J0 2220 aa9.56□□□□□ -0.88
CMSS1-201ENST00000421999 A0A0J9YYE9 177 aa9.56□□□□□ -0.88
CMSS1-201ENST00000421999 KRT87PA6NCN2 255 aa9.56□□□□□ -0.88
CMSS1-201ENST00000421999 TRBC1P01850 177 aa9.56□□□□□ -0.88
CMSS1-201ENST00000421999 PROCP04070 461 aa9.56□□□□□ -0.88
CMSS1-201ENST00000421999 CYP17A1P05093 508 aa9.56□□□□□ -0.88
CMSS1-201ENST00000421999 ZDHHC11BP0C7U3 371 aa9.56□□□□□ -0.88
CMSS1-201ENST00000421999 C5AR1P21730 350 aa9.56□□□□□ -0.88
CMSS1-201ENST00000421999 NOS3P29474 1203 aa9.56□□□□□ -0.88
CMSS1-201ENST00000421999 ARCN1P48444 511 aaKnown RBP9.56□□□□□ -0.88
CMSS1-201ENST00000421999 POLD2P49005 469 aa9.56□□□□□ -0.88
CMSS1-201ENST00000421999 MAPK12P53778 367 aa9.56□□□□□ -0.88
CMSS1-201ENST00000421999 PKNOX1P55347 436 aa9.56□□□□□ -0.88
CMSS1-201ENST00000421999 ARF5P84085 180 aa9.56□□□□□ -0.88
CMSS1-201ENST00000421999 OCA2Q04671 838 aa9.56□□□□□ -0.88
CMSS1-201ENST00000421999 C2orf80Q0P641 193 aa9.56□□□□□ -0.88
CMSS1-201ENST00000421999 MED21Q13503 144 aa9.56□□□□□ -0.88
CMSS1-201ENST00000421999 TDGQ13569 410 aa9.56□□□□□ -0.88
CMSS1-201ENST00000421999 SLC5A9Q2M3M2 681 aa9.56□□□□□ -0.88
CMSS1-201ENST00000421999 NCEH1Q6PIU2 408 aa9.56□□□□□ -0.88
CMSS1-201ENST00000421999 CYP2U1Q7Z449 544 aa9.56□□□□□ -0.88
CMSS1-201ENST00000421999 CILP2Q8IUL8 1156 aa9.56□□□□□ -0.88
CMSS1-201ENST00000421999 NXPE1Q8N323 547 aa9.56□□□□□ -0.88
CMSS1-201ENST00000421999 CATSPER1Q8NEC5 780 aa9.56□□□□□ -0.88
CMSS1-201ENST00000421999 OR2T3Q8NH03 318 aa9.56□□□□□ -0.88
CMSS1-201ENST00000421999 OR52E6Q96RD3 313 aa9.56□□□□□ -0.88
CMSS1-201ENST00000421999 TMEM245Q9H330 911 aa9.56□□□□□ -0.88
CMSS1-201ENST00000421999 LRTM1Q9HBL6 345 aa9.56□□□□□ -0.88
CMSS1-201ENST00000421999 KCNK4Q9NYG8 393 aa9.56□□□□□ -0.88
CMSS1-201ENST00000421999 YBX2Q9Y2T7 364 aaKnown RBP9.56□□□□□ -0.88
CMSS1-201ENST00000421999 PCDHGA11Q9Y5H2 935 aa9.56□□□□□ -0.88
CMSS1-201ENST00000421999 C15orf38-AP3S2A0A0A6YYH1 394 aa9.55□□□□□ -0.88
CMSS1-201ENST00000421999 RFXANKO14593 260 aa9.55□□□□□ -0.88
CMSS1-201ENST00000421999 ZNF217O75362 1048 aa9.55□□□□□ -0.88
CMSS1-201ENST00000421999 ALBP02768 609 aa9.55□□□□□ -0.88
CMSS1-201ENST00000421999 CCR2P41597 374 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms