RNA–Protein interactions for RNA: ENST00000420973.5

CHRD-204, Transcript of chordin, humanhuman

TSL 1 (best)

Gene CHRD, Length 3,492 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-204ENST00000420973 C5orf22Q49AR2 442 aa14.29□□□□□ -0.12
CHRD-204ENST00000420973 AASDHQ4L235 1098 aaPredicted RBP14.29□□□□□ -0.12
CHRD-204ENST00000420973 SLC9B1Q4ZJI4 515 aa14.29□□□□□ -0.12
CHRD-204ENST00000420973 ATAD3CQ5T2N8 411 aa14.29□□□□□ -0.12
CHRD-204ENST00000420973 ERAP2Q6P179 960 aa14.29□□□□□ -0.12
CHRD-204ENST00000420973 SH2D5Q6ZV89 423 aa14.29□□□□□ -0.12
CHRD-204ENST00000420973 SPATC1Q76KD6 591 aa14.29□□□□□ -0.12
CHRD-204ENST00000420973 AMIGO1Q86WK6 493 aa14.29□□□□□ -0.12
CHRD-204ENST00000420973 PDPRQ8NCN5 879 aa14.29□□□□□ -0.12
CHRD-204ENST00000420973 RAB2BQ8WUD1 216 aa14.29□□□□□ -0.12
CHRD-204ENST00000420973 PGAP3Q96FM1 320 aaPredicted RBP14.29□□□□□ -0.12
CHRD-204ENST00000420973 POLR1EQ9GZS1 481 aaKnown RBP14.29□□□□□ -0.12
CHRD-204ENST00000420973 EIF2B3Q9NR50 452 aaKnown RBP14.29□□□□□ -0.12
CHRD-204ENST00000420973 CPNE7Q9UBL6 633 aa14.29□□□□□ -0.12
CHRD-204ENST00000420973 PCDHB9Q9Y5E1 797 aa14.29□□□□□ -0.12
CHRD-204ENST00000420973 CHD7Q9P2D1 2997 aa14.28□□□□□ -0.12
CHRD-204ENST00000420973 K7ERQ8 282 aa14.28□□□□□ -0.12
CHRD-204ENST00000420973 PRKD3O94806 890 aa14.28□□□□□ -0.12
CHRD-204ENST00000420973 APOA1P02647 267 aa14.28□□□□□ -0.12
CHRD-204ENST00000420973 ALOX12P18054 663 aa14.28□□□□□ -0.12
CHRD-204ENST00000420973 ME2P23368 584 aa14.28□□□□□ -0.12
CHRD-204ENST00000420973 HNF1BP35680 557 aa14.28□□□□□ -0.12
CHRD-204ENST00000420973 CASP2P42575 452 aa14.28□□□□□ -0.12
CHRD-204ENST00000420973 MAGEA6P43360 314 aa14.28□□□□□ -0.12
CHRD-204ENST00000420973 GPNMBQ14956 572 aa14.28□□□□□ -0.12
CHRD-204ENST00000420973 TRIP4Q15650 581 aaPredicted RBP14.28□□□□□ -0.12
CHRD-204ENST00000420973 NADSYN1Q6IA69 706 aa14.28□□□□□ -0.12
CHRD-204ENST00000420973 SYTL1Q8IYJ3 562 aa14.28□□□□□ -0.12
CHRD-204ENST00000420973 OR4K2Q8NGD2 314 aa14.28□□□□□ -0.12
CHRD-204ENST00000420973 HEXDCQ8WVB3 486 aa14.28□□□□□ -0.12
CHRD-204ENST00000420973 MSANTD3Q96H12 275 aa14.28□□□□□ -0.12
CHRD-204ENST00000420973 FUBP3Q96I24 572 aaKnown RBP eCLIP14.28□□□□□ -0.12
CHRD-204ENST00000420973 FCRL5Q96RD9 977 aa14.28□□□□□ -0.12
CHRD-204ENST00000420973 TNKS2Q9H2K2 1166 aa14.28□□□□□ -0.12
CHRD-204ENST00000420973 IL1RL2Q9HB29 575 aa14.28□□□□□ -0.12
CHRD-204ENST00000420973 PGRP06401 933 aa14.28□□□□□ -0.12
CHRD-204ENST00000420973 GABRR2P28476 465 aa14.28□□□□□ -0.12
CHRD-204ENST00000420973 APLP1P51693 650 aa14.28□□□□□ -0.12
CHRD-204ENST00000420973 MBLAC2Q68D91 279 aa14.28□□□□□ -0.12
CHRD-204ENST00000420973 HORMAD1Q86X24 394 aa14.28□□□□□ -0.12
CHRD-204ENST00000420973 CPA6Q8N4T0 437 aa14.28□□□□□ -0.12
CHRD-204ENST00000420973 KYQ8NBH2 561 aa14.28□□□□□ -0.12
CHRD-204ENST00000420973 GTF2H4Q92759 462 aa14.28□□□□□ -0.12
CHRD-204ENST00000420973 OR52B2Q96RD2 323 aa14.28□□□□□ -0.12
CHRD-204ENST00000420973 HBEGFQ99075 208 aa14.28□□□□□ -0.12
CHRD-204ENST00000420973 USB1Q9BQ65 265 aaKnown RBP14.28□□□□□ -0.12
CHRD-204ENST00000420973 CDADC1Q9BWV3 514 aa14.28□□□□□ -0.12
CHRD-204ENST00000420973 RHOJQ9H4E5 214 aa14.28□□□□□ -0.12
CHRD-204ENST00000420973 IFT22Q9H7X7 185 aa14.28□□□□□ -0.12
CHRD-204ENST00000420973 KLF15Q9UIH9 416 aa14.28□□□□□ -0.12
CHRD-204ENST00000420973 TDRD15B5MCY1 1934 aaKnown RBP14.28□□□□□ -0.12
CHRD-204ENST00000420973 ZNF487B1APH4 448 aa14.28□□□□□ -0.12
CHRD-204ENST00000420973 ALDH1A2O94788 518 aa14.28□□□□□ -0.12
CHRD-204ENST00000420973 CD1EP15812 388 aa14.28□□□□□ -0.12
CHRD-204ENST00000420973 CBLP22681 906 aa14.28□□□□□ -0.12
CHRD-204ENST00000420973 CNTFP26441 200 aa14.28□□□□□ -0.12
CHRD-204ENST00000420973 IL12AP29459 219 aa14.28□□□□□ -0.12
CHRD-204ENST00000420973 MAPK12P53778 367 aa14.28□□□□□ -0.12
CHRD-204ENST00000420973 PLIN5Q00G26 463 aa14.28□□□□□ -0.12
CHRD-204ENST00000420973 STXBP5Q5T5C0 1151 aa14.28□□□□□ -0.12
CHRD-204ENST00000420973 C16orf89Q6UX73 402 aa14.28□□□□□ -0.12
CHRD-204ENST00000420973 PJA1Q8NG27 643 aa14.28□□□□□ -0.12
CHRD-204ENST00000420973 SH3RF2Q8TEC5 729 aa14.28□□□□□ -0.12
CHRD-204ENST00000420973 ASB12Q8WXK4 309 aa14.28□□□□□ -0.12
CHRD-204ENST00000420973 SIPA1Q96FS4 1042 aa14.28□□□□□ -0.12
CHRD-204ENST00000420973 BEX2Q9BXY8 128 aa14.28□□□□□ -0.12
CHRD-204ENST00000420973 AFF4Q9UHB7 1163 aaKnown RBP14.28□□□□□ -0.12
CHRD-204ENST00000420973 SNX8Q9Y5X2 465 aa14.28□□□□□ -0.12
CHRD-204ENST00000420973 RGS5O15539 181 aa14.27□□□□□ -0.12
CHRD-204ENST00000420973 TIPRLO75663 272 aa14.27□□□□□ -0.12
CHRD-204ENST00000420973 DHRS4L1P0CG22 281 aa14.27□□□□□ -0.12
CHRD-204ENST00000420973 CHRM3P20309 590 aa14.27□□□□□ -0.12
CHRD-204ENST00000420973 CDKN1CP49918 316 aaPredicted RBP14.27□□□□□ -0.12
CHRD-204ENST00000420973 FPGSQ05932 587 aa14.27□□□□□ -0.12
CHRD-204ENST00000420973 TOP3AQ13472 1001 aaPredicted RBP14.27□□□□□ -0.12
CHRD-204ENST00000420973 SHEQ5VZ18 495 aa14.27□□□□□ -0.12
CHRD-204ENST00000420973 CLEC6AQ6EIG7 209 aa14.27□□□□□ -0.12
CHRD-204ENST00000420973 PAGE2Q7Z2X7 111 aa14.27□□□□□ -0.12
CHRD-204ENST00000420973 GLT6D1Q7Z4J2 308 aa14.27□□□□□ -0.12
CHRD-204ENST00000420973 NECAB2Q7Z6G3 386 aa14.27□□□□□ -0.12
CHRD-204ENST00000420973 CACUL1Q86Y37 369 aa14.27□□□□□ -0.12
CHRD-204ENST00000420973 PGBD5Q8N414 524 aa14.27□□□□□ -0.12
CHRD-204ENST00000420973 MAPK15Q8TD08 544 aa14.27□□□□□ -0.12
CHRD-204ENST00000420973 FBXL20Q96IG2 436 aa14.27□□□□□ -0.12
CHRD-204ENST00000420973 SLC25A51Q9H1U9 297 aa14.27□□□□□ -0.12
CHRD-204ENST00000420973 CPNE5Q9HCH3 593 aa14.27□□□□□ -0.12
CHRD-204ENST00000420973 TMEM9Q9P0T7 183 aa14.27□□□□□ -0.12
CHRD-204ENST00000420973 SIRPGQ9P1W8 387 aa14.27□□□□□ -0.12
CHRD-204ENST00000420973 SORCS3Q9UPU3 1222 aa14.27□□□□□ -0.12
CHRD-204ENST00000420973 HEATR9A2RTY3 570 aa14.27□□□□□ -0.13
CHRD-204ENST00000420973 LRRC14BA6NHZ5 514 aa14.27□□□□□ -0.13
CHRD-204ENST00000420973 KLKB1P03952 638 aa14.27□□□□□ -0.13
CHRD-204ENST00000420973 TFEBP19484 476 aa14.27□□□□□ -0.13
CHRD-204ENST00000420973 SERPINB10P48595 397 aa14.27□□□□□ -0.13
CHRD-204ENST00000420973 PTPN5P54829 565 aa14.27□□□□□ -0.13
CHRD-204ENST00000420973 RAB10P61026 200 aa14.27□□□□□ -0.13
CHRD-204ENST00000420973 SLX4IPQ5VYV7 408 aa14.27□□□□□ -0.13
CHRD-204ENST00000420973 KCTD11Q693B1 232 aa14.27□□□□□ -0.13
CHRD-204ENST00000420973 DNAJB7Q7Z6W7 309 aaPredicted RBP14.27□□□□□ -0.13
CHRD-204ENST00000420973 RBM23Q86U06 439 aaKnown RBP14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms