RNA–Protein interactions for RNA: ENST00000417268.3

SCAF8-203, Transcript of SR-related CTD associated factor 8, humanhuman

TSL 2 BASIC

Gene SCAF8, Length 4,944 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-203ENST00000417268 REXO5Q96IC2 774 aaKnown RBP12.63□□□□□ -0.39
SCAF8-203ENST00000417268 GATA5Q9BWX5 397 aaPredicted RBP12.63□□□□□ -0.39
SCAF8-203ENST00000417268 WDR6Q9NNW5 1121 aaKnown RBP12.63□□□□□ -0.39
SCAF8-203ENST00000417268 TRPC4Q9UBN4 977 aa12.63□□□□□ -0.39
SCAF8-203ENST00000417268 OR2AG2A6NM03 316 aa12.62□□□□□ -0.39
SCAF8-203ENST00000417268 OR6B1O95007 311 aa12.62□□□□□ -0.39
SCAF8-203ENST00000417268 CKMT2P17540 419 aa12.62□□□□□ -0.39
SCAF8-203ENST00000417268 TLX1P31314 330 aaPredicted RBP12.62□□□□□ -0.39
SCAF8-203ENST00000417268 AAK1Q2M2I8 961 aa12.62□□□□□ -0.39
SCAF8-203ENST00000417268 PITRM1Q5JRX3 1037 aa12.62□□□□□ -0.39
SCAF8-203ENST00000417268 EOGTQ5NDL2 527 aa12.62□□□□□ -0.39
SCAF8-203ENST00000417268 C22orf39Q6P5X5 142 aa12.62□□□□□ -0.39
SCAF8-203ENST00000417268 GATAD2AQ86YP4 633 aa12.62□□□□□ -0.39
SCAF8-203ENST00000417268 EPHX4Q8IUS5 362 aa12.62□□□□□ -0.39
SCAF8-203ENST00000417268 POLR3BQ9NW08 1133 aaPredicted RBP12.62□□□□□ -0.39
SCAF8-203ENST00000417268 AP3M1Q9Y2T2 418 aa12.62□□□□□ -0.39
SCAF8-203ENST00000417268 PAPPA2Q9BXP8 1791 aa12.62□□□□□ -0.39
SCAF8-203ENST00000417268 PHIPQ8WWQ0 1821 aa12.62□□□□□ -0.39
SCAF8-203ENST00000417268 AREL1O15033 823 aa12.62□□□□□ -0.39
SCAF8-203ENST00000417268 STC2O76061 302 aa12.62□□□□□ -0.39
SCAF8-203ENST00000417268 HPGDP15428 266 aa12.62□□□□□ -0.39
SCAF8-203ENST00000417268 SCAPQ12770 1279 aa12.62□□□□□ -0.39
SCAF8-203ENST00000417268 MPP2Q14168 576 aa12.62□□□□□ -0.39
SCAF8-203ENST00000417268 TRIM71Q2Q1W2 868 aaKnown RBP12.62□□□□□ -0.39
SCAF8-203ENST00000417268 FGD3Q5JSP0 725 aa12.62□□□□□ -0.39
SCAF8-203ENST00000417268 CCNYL2Q5T2Q4 361 aa12.62□□□□□ -0.39
SCAF8-203ENST00000417268 C11orf88Q6PI97 169 aa12.62□□□□□ -0.39
SCAF8-203ENST00000417268 UMODL1-AS1Q8N2C9 162 aa12.62□□□□□ -0.39
SCAF8-203ENST00000417268 CAMKK1Q8N5S9 505 aa12.62□□□□□ -0.39
SCAF8-203ENST00000417268 RAB2BQ8WUD1 216 aa12.62□□□□□ -0.39
SCAF8-203ENST00000417268 NARS2Q96I59 477 aaKnown RBP12.62□□□□□ -0.39
SCAF8-203ENST00000417268 TSGA13Q96PP4 275 aa12.62□□□□□ -0.39
SCAF8-203ENST00000417268 LMAN2LQ9H0V9 348 aa12.62□□□□□ -0.39
SCAF8-203ENST00000417268 NSUN3Q9H649 340 aaKnown RBP12.62□□□□□ -0.39
SCAF8-203ENST00000417268 ENTPD4Q9Y227 616 aa12.62□□□□□ -0.39
SCAF8-203ENST00000417268 GSAPA4D1B5 854 aa12.62□□□□□ -0.39
SCAF8-203ENST00000417268 BBIP1A8MTZ0 92 aa12.62□□□□□ -0.39
SCAF8-203ENST00000417268 J3QRK9 145 aa12.62□□□□□ -0.39
SCAF8-203ENST00000417268 VIPP01282 170 aa12.62□□□□□ -0.39
SCAF8-203ENST00000417268 IDO1P14902 403 aa12.62□□□□□ -0.39
SCAF8-203ENST00000417268 CDK9P50750 372 aaKnown RBP12.62□□□□□ -0.39
SCAF8-203ENST00000417268 RPL26P61254 145 aaKnown RBP12.62□□□□□ -0.39
SCAF8-203ENST00000417268 GRM2Q14416 872 aa12.62□□□□□ -0.39
SCAF8-203ENST00000417268 DSC3Q14574 896 aa12.62□□□□□ -0.39
SCAF8-203ENST00000417268 CPSF6Q16630 551 aaKnown RBP eCLIP12.62□□□□□ -0.393e-6■■□□□ 14.2
SCAF8-203ENST00000417268 ALFQ53S48 1182 aa12.62□□□□□ -0.39
SCAF8-203ENST00000417268 SNX20Q7Z614 316 aa12.62□□□□□ -0.39
SCAF8-203ENST00000417268 C3orf58Q8NDZ4 430 aa12.62□□□□□ -0.39
SCAF8-203ENST00000417268 HM13Q8TCT9 377 aa12.62□□□□□ -0.39
SCAF8-203ENST00000417268 FBXL8Q96CD0 374 aa12.62□□□□□ -0.39
SCAF8-203ENST00000417268 MTFMTQ96DP5 389 aaKnown RBP12.62□□□□□ -0.39
SCAF8-203ENST00000417268 ZDHHC7Q9NXF8 308 aa12.62□□□□□ -0.39
SCAF8-203ENST00000417268 FFAR3O14843 346 aa12.62□□□□□ -0.39
SCAF8-203ENST00000417268 GPR42O15529 346 aa12.62□□□□□ -0.39
SCAF8-203ENST00000417268 MAT2AP31153 395 aaKnown RBP12.62□□□□□ -0.39
SCAF8-203ENST00000417268 ZNF776Q68DI1 518 aaPredicted RBP12.62□□□□□ -0.39
SCAF8-203ENST00000417268 C17orf64Q86WR6 236 aa12.62□□□□□ -0.39
SCAF8-203ENST00000417268 ZNF395Q9H8N7 513 aaPredicted RBP12.62□□□□□ -0.39
SCAF8-203ENST00000417268 PMF1-BGLAPU3KQ54 211 aa12.62□□□□□ -0.39
SCAF8-203ENST00000417268 C2orf78A6NCI8 922 aa12.61□□□□□ -0.39
SCAF8-203ENST00000417268 SLC28A1O00337 649 aa12.61□□□□□ -0.39
SCAF8-203ENST00000417268 SEMA3DO95025 777 aa12.61□□□□□ -0.39
SCAF8-203ENST00000417268 THRBP10828 461 aa12.61□□□□□ -0.39
SCAF8-203ENST00000417268 XRCC1P18887 633 aaPredicted RBP12.61□□□□□ -0.39
SCAF8-203ENST00000417268 PYDC2Q56P42 97 aa12.61□□□□□ -0.39
SCAF8-203ENST00000417268 PM20D1Q6GTS8 502 aa12.61□□□□□ -0.39
SCAF8-203ENST00000417268 FSTL4Q6MZW2 842 aa12.61□□□□□ -0.39
SCAF8-203ENST00000417268 TLDC1Q6P9B6 456 aa12.61□□□□□ -0.39
SCAF8-203ENST00000417268 PROSER1Q86XN7 944 aa12.61□□□□□ -0.39
SCAF8-203ENST00000417268 CFAP206Q8IYR0 622 aa12.61□□□□□ -0.39
SCAF8-203ENST00000417268 RERGQ96A58 199 aaPredicted RBP12.61□□□□□ -0.39
SCAF8-203ENST00000417268 MRPL39Q9NYK5 338 aaKnown RBP12.61□□□□□ -0.39
SCAF8-203ENST00000417268 ATP6V1HQ9UI12 483 aa12.61□□□□□ -0.39
SCAF8-203ENST00000417268 CARD8Q9Y2G2 431 aa12.61□□□□□ -0.39
SCAF8-203ENST00000417268 COLEC10Q9Y6Z7 277 aa12.61□□□□□ -0.39
SCAF8-203ENST00000417268 ANKRD66B4E2M5 251 aa12.61□□□□□ -0.39
SCAF8-203ENST00000417268 PFKLP17858 780 aa12.61□□□□□ -0.39
SCAF8-203ENST00000417268 OR10G6Q8NH81 332 aa12.61□□□□□ -0.39
SCAF8-203ENST00000417268 HMGB4Q8WW32 186 aa12.61□□□□□ -0.39
SCAF8-203ENST00000417268 FAIM2Q9BWQ8 316 aa12.61□□□□□ -0.39
SCAF8-203ENST00000417268 SAMHD1Q9Y3Z3 626 aaKnown RBP12.61□□□□□ -0.39
SCAF8-203ENST00000417268 MYH9P35579 1960 aaKnown RBP12.61□□□□□ -0.39
SCAF8-203ENST00000417268 FAM155AB1AL88 458 aaPredicted RBP12.61□□□□□ -0.39
SCAF8-203ENST00000417268 PSMD11O00231 422 aa12.61□□□□□ -0.39
SCAF8-203ENST00000417268 CCNDBP1O95273 360 aa12.61□□□□□ -0.39
SCAF8-203ENST00000417268 ITGAXP20702 1163 aa12.61□□□□□ -0.39
SCAF8-203ENST00000417268 ALDH4A1P30038 563 aa12.61□□□□□ -0.39
SCAF8-203ENST00000417268 AFF1P51825 1210 aaKnown RBP12.61□□□□□ -0.39
SCAF8-203ENST00000417268 BNC1Q01954 994 aa12.61□□□□□ -0.39
SCAF8-203ENST00000417268 SIM2Q14190 667 aaPredicted RBP12.61□□□□□ -0.39
SCAF8-203ENST00000417268 TEAD4Q15561 434 aa12.61□□□□□ -0.39
SCAF8-203ENST00000417268 LRRC26Q2I0M4 334 aa12.61□□□□□ -0.39
SCAF8-203ENST00000417268 ZBED5Q49AG3 693 aa12.61□□□□□ -0.39
SCAF8-203ENST00000417268 VPS26BQ4G0F5 336 aa12.61□□□□□ -0.39
SCAF8-203ENST00000417268 ATAD3BQ5T9A4 648 aa12.61□□□□□ -0.39
SCAF8-203ENST00000417268 GLYATQ6IB77 296 aa12.61□□□□□ -0.39
SCAF8-203ENST00000417268 TRMT10BQ6PF06 316 aaKnown RBP12.61□□□□□ -0.39
SCAF8-203ENST00000417268 TMEM220Q6QAJ8 160 aa12.61□□□□□ -0.39
SCAF8-203ENST00000417268 ZNF614Q8N883 585 aa12.61□□□□□ -0.39
SCAF8-203ENST00000417268 NXNL1Q96CM4 212 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms