RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 I3L521 148 aa11.87□□□□□ -0.51
UBR4-205ENST00000417040 CDC40O60508 579 aaKnown RBP eCLIP11.87□□□□□ -0.51
UBR4-205ENST00000417040 AKR1A1P14550 325 aa11.87□□□□□ -0.51
UBR4-205ENST00000417040 PTNP21246 168 aa11.87□□□□□ -0.51
UBR4-205ENST00000417040 RYKP34925 604 aa11.87□□□□□ -0.51
UBR4-205ENST00000417040 GNALP38405 381 aa11.87□□□□□ -0.51
UBR4-205ENST00000417040 CACNG1Q06432 222 aa11.87□□□□□ -0.51
UBR4-205ENST00000417040 CRY2Q49AN0 593 aa11.87□□□□□ -0.51
UBR4-205ENST00000417040 TREML2Q5T2D2 321 aa11.87□□□□□ -0.51
UBR4-205ENST00000417040 TSTD2Q5T7W7 516 aa11.87□□□□□ -0.51
UBR4-205ENST00000417040 DTX3Q8N9I9 347 aa11.87□□□□□ -0.51
UBR4-205ENST00000417040 LEMD2Q8NC56 503 aa11.87□□□□□ -0.51
UBR4-205ENST00000417040 LRRC58Q96CX6 371 aa11.87□□□□□ -0.51
UBR4-205ENST00000417040 KCTD5Q9NXV2 234 aa11.87□□□□□ -0.51
UBR4-205ENST00000417040 PHF24Q9UPV7 400 aa11.87□□□□□ -0.51
UBR4-205ENST00000417040 CNTN6Q9UQ52 1028 aa11.87□□□□□ -0.51
UBR4-205ENST00000417040 CARD8Q9Y2G2 431 aa11.87□□□□□ -0.51
UBR4-205ENST00000417040 DGKQP52824 942 aa11.86□□□□□ -0.51
UBR4-205ENST00000417040 ZNF155Q12901 538 aaPredicted RBP11.86□□□□□ -0.51
UBR4-205ENST00000417040 CHIT1Q13231 466 aa11.86□□□□□ -0.51
UBR4-205ENST00000417040 RUNDC3AQ59EK9 446 aa11.86□□□□□ -0.51
UBR4-205ENST00000417040 RBM48Q5RL73 367 aaKnown RBP11.86□□□□□ -0.51
UBR4-205ENST00000417040 TNFAIP8L2Q6P589 184 aaPredicted RBP11.86□□□□□ -0.51
UBR4-205ENST00000417040 SERPINA13PQ6UXR4 307 aa11.86□□□□□ -0.51
UBR4-205ENST00000417040 ZNF627Q7L945 461 aa11.86□□□□□ -0.51
UBR4-205ENST00000417040 CFAP206Q8IYR0 622 aa11.86□□□□□ -0.51
UBR4-205ENST00000417040 NAT8LQ8N9F0 302 aa11.86□□□□□ -0.51
UBR4-205ENST00000417040 STYXQ8WUJ0 223 aa11.86□□□□□ -0.51
UBR4-205ENST00000417040 SMG7Q92540 1137 aaKnown RBP11.86□□□□□ -0.51
UBR4-205ENST00000417040 TMEM74Q96NL1 305 aa11.86□□□□□ -0.51
UBR4-205ENST00000417040 SLC6A15Q9H2J7 730 aa11.86□□□□□ -0.51
UBR4-205ENST00000417040 TMEM39AQ9NV64 488 aa11.86□□□□□ -0.51
UBR4-205ENST00000417040 HMGXB4Q9UGU5 601 aa11.86□□□□□ -0.51
UBR4-205ENST00000417040 SLC15A5A6NIM6 579 aa11.86□□□□□ -0.51
UBR4-205ENST00000417040 PRH1P02810 166 aa11.86□□□□□ -0.51
UBR4-205ENST00000417040 TIE1P35590 1138 aa11.86□□□□□ -0.51
UBR4-205ENST00000417040 STT3AP46977 705 aa11.86□□□□□ -0.51
UBR4-205ENST00000417040 GPX6P59796 221 aa11.86□□□□□ -0.51
UBR4-205ENST00000417040 UGT8Q16880 541 aa11.86□□□□□ -0.51
UBR4-205ENST00000417040 MAP1SQ66K74 1059 aaPredicted RBP11.86□□□□□ -0.51
UBR4-205ENST00000417040 PIM3Q86V86 326 aa11.86□□□□□ -0.51
UBR4-205ENST00000417040 SERPINA9Q86WD7 417 aa11.86□□□□□ -0.51
UBR4-205ENST00000417040 RIOX2Q8IUF8 465 aa11.86□□□□□ -0.51
UBR4-205ENST00000417040 ZNF248Q8NDW4 579 aa11.86□□□□□ -0.51
UBR4-205ENST00000417040 PSMG2Q969U7 264 aa11.86□□□□□ -0.51
UBR4-205ENST00000417040 TRIM43Q96BQ3 446 aaPredicted RBP11.86□□□□□ -0.51
UBR4-205ENST00000417040 IFT46Q9NQC8 304 aa11.86□□□□□ -0.51
UBR4-205ENST00000417040 MAU2Q9Y6X3 613 aa11.86□□□□□ -0.51
UBR4-205ENST00000417040 LOC100130705A0A1B0GUX0 176 aa11.86□□□□□ -0.51
UBR4-205ENST00000417040 RIIAD1A6NNX1 92 aa11.86□□□□□ -0.51
UBR4-205ENST00000417040 PRKCGP05129 697 aa11.86□□□□□ -0.51
UBR4-205ENST00000417040 GIMD1P0DJR0 217 aa11.86□□□□□ -0.51
UBR4-205ENST00000417040 ATF6P18850 670 aa11.86□□□□□ -0.51
UBR4-205ENST00000417040 IL1R2P27930 398 aa11.86□□□□□ -0.51
UBR4-205ENST00000417040 ENTPD1P49961 510 aa11.86□□□□□ -0.51
UBR4-205ENST00000417040 TAS2R39P59534 338 aa11.86□□□□□ -0.51
UBR4-205ENST00000417040 C1orf127Q8N9H9 656 aa11.86□□□□□ -0.51
UBR4-205ENST00000417040 GLIS1Q8NBF1 620 aa11.86□□□□□ -0.51
UBR4-205ENST00000417040 SOX17Q9H6I2 414 aaPredicted RBP11.86□□□□□ -0.51
UBR4-205ENST00000417040 TFPIP10646 304 aa11.86□□□□□ -0.51
UBR4-205ENST00000417040 TAF10Q12962 218 aa11.86□□□□□ -0.51
UBR4-205ENST00000417040 CBFBQ13951 182 aa11.86□□□□□ -0.51
UBR4-205ENST00000417040 DAG1Q14118 895 aa11.86□□□□□ -0.51
UBR4-205ENST00000417040 RTL4Q6ZR62 310 aa11.86□□□□□ -0.51
UBR4-205ENST00000417040 TOP6BLQ8N6T0 577 aa11.86□□□□□ -0.51
UBR4-205ENST00000417040 OR7D4Q8NG98 312 aa11.86□□□□□ -0.51
UBR4-205ENST00000417040 SLC13A3Q8WWT9 602 aa11.86□□□□□ -0.51
UBR4-205ENST00000417040 LOC100509620A0A075B734 347 aa11.86□□□□□ -0.51
UBR4-205ENST00000417040 PRMT5O14744 637 aaPredicted RBP11.86□□□□□ -0.51
UBR4-205ENST00000417040 XPNPEP2O43895 674 aa11.86□□□□□ -0.51
UBR4-205ENST00000417040 C22orf31O95567 290 aa11.86□□□□□ -0.51
UBR4-205ENST00000417040 CDH1P12830 882 aa11.86□□□□□ -0.51
UBR4-205ENST00000417040 CORO1AP31146 461 aaKnown RBP11.86□□□□□ -0.51
UBR4-205ENST00000417040 AVPR1BP47901 424 aa11.86□□□□□ -0.51
UBR4-205ENST00000417040 RGS8P57771 180 aaPredicted RBP11.86□□□□□ -0.51
UBR4-205ENST00000417040 CDKL1Q00532 357 aa11.86□□□□□ -0.51
UBR4-205ENST00000417040 ZNF517Q6ZMY9 492 aaPredicted RBP11.86□□□□□ -0.51
UBR4-205ENST00000417040 OR2L3Q8NG85 312 aa11.86□□□□□ -0.51
UBR4-205ENST00000417040 UROC1Q96N76 676 aa11.86□□□□□ -0.51
UBR4-205ENST00000417040 MAN2B2Q9Y2E5 1009 aa11.86□□□□□ -0.51
UBR4-205ENST00000417040 C5orf51A6NDU8 294 aa11.85□□□□□ -0.51
UBR4-205ENST00000417040 RSL1D1O76021 490 aaKnown RBP11.85□□□□□ -0.51
UBR4-205ENST00000417040 GLUD1P00367 558 aa11.85□□□□□ -0.51
UBR4-205ENST00000417040 GGT5P36269 586 aa11.85□□□□□ -0.51
UBR4-205ENST00000417040 CCL23P55773 120 aa11.85□□□□□ -0.51
UBR4-205ENST00000417040 RAB2AP61019 212 aa11.85□□□□□ -0.51
UBR4-205ENST00000417040 CHST15Q7LFX5 561 aaPredicted RBP11.85□□□□□ -0.51
UBR4-205ENST00000417040 IQCHQ86VS3 1027 aa11.85□□□□□ -0.51
UBR4-205ENST00000417040 EGFL6Q8IUX8 553 aa11.85□□□□□ -0.51
UBR4-205ENST00000417040 GALNT12Q8IXK2 581 aa11.85□□□□□ -0.51
UBR4-205ENST00000417040 C11orf65Q8NCR3 313 aa11.85□□□□□ -0.51
UBR4-205ENST00000417040 OR9I1Q8NGQ6 314 aa11.85□□□□□ -0.51
UBR4-205ENST00000417040 BPIFB1Q8TDL5 484 aa11.85□□□□□ -0.51
UBR4-205ENST00000417040 ASB12Q8WXK4 309 aa11.85□□□□□ -0.51
UBR4-205ENST00000417040 MTERF1Q99551 399 aaKnown RBP11.85□□□□□ -0.51
UBR4-205ENST00000417040 ZSCAN5AQ9BUG6 496 aa11.85□□□□□ -0.51
UBR4-205ENST00000417040 POLR3BQ9NW08 1133 aaPredicted RBP11.85□□□□□ -0.51
UBR4-205ENST00000417040 CPN2P22792 545 aa11.85□□□□□ -0.51
UBR4-205ENST00000417040 CLCNKBP51801 687 aa11.85□□□□□ -0.51
UBR4-205ENST00000417040 HMGCS1Q01581 520 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms