RNA–Protein interactions for RNA: ENST00000416571.5

MDC1-202, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-202ENST00000416571 SSPNQ14714 243 aa9.73□□□□□ -0.85
MDC1-202ENST00000416571 DCAF10Q5QP82 559 aa9.73□□□□□ -0.85
MDC1-202ENST00000416571 C1QL3Q5VWW1 255 aa9.73□□□□□ -0.85
MDC1-202ENST00000416571 ZNF449Q6P9G9 518 aa9.73□□□□□ -0.85
MDC1-202ENST00000416571 CFAP206Q8IYR0 622 aa9.73□□□□□ -0.85
MDC1-202ENST00000416571 IPMKQ8NFU5 416 aa9.73□□□□□ -0.85
MDC1-202ENST00000416571 TFB1MQ8WVM0 346 aaKnown RBP9.73□□□□□ -0.85
MDC1-202ENST00000416571 RNF25Q96BH1 459 aaPredicted RBP9.73□□□□□ -0.85
MDC1-202ENST00000416571 IQCDQ96DY2 449 aa9.73□□□□□ -0.85
MDC1-202ENST00000416571 RBM41Q96IZ5 413 aaKnown RBP9.73□□□□□ -0.85
MDC1-202ENST00000416571 RMDN2Q96LZ7 410 aa9.73□□□□□ -0.85
MDC1-202ENST00000416571 PHF12Q96QT6 1004 aa9.73□□□□□ -0.85
MDC1-202ENST00000416571 FERD3LQ96RJ6 166 aa9.73□□□□□ -0.85
MDC1-202ENST00000416571 FSD1LQ9BXM9 530 aa9.73□□□□□ -0.85
MDC1-202ENST00000416571 ASB8Q9H765 288 aa9.73□□□□□ -0.85
MDC1-202ENST00000416571 KLHL8Q9P2G9 620 aaPredicted RBP9.73□□□□□ -0.85
MDC1-202ENST00000416571 NDOR1Q9UHB4 597 aa9.73□□□□□ -0.85
MDC1-202ENST00000416571 PTRH2Q9Y3E5 179 aaKnown RBP9.73□□□□□ -0.85
MDC1-202ENST00000416571 C2orf81A6NN90 581 aa9.72□□□□□ -0.85
MDC1-202ENST00000416571 C2orf74A8MZ97 194 aa9.72□□□□□ -0.85
MDC1-202ENST00000416571 HNRNPRO43390 633 aaKnown RBP9.72□□□□□ -0.85
MDC1-202ENST00000416571 ELAVL4P26378 380 aaKnown RBP9.72□□□□□ -0.85
MDC1-202ENST00000416571 CHRNA4P43681 627 aa9.72□□□□□ -0.85
MDC1-202ENST00000416571 NR2C2P49116 596 aa9.72□□□□□ -0.85
MDC1-202ENST00000416571 MPP3Q13368 585 aa9.72□□□□□ -0.85
MDC1-202ENST00000416571 SLC1A5Q15758 541 aa9.72□□□□□ -0.85
MDC1-202ENST00000416571 CYP2A13Q16696 494 aa9.72□□□□□ -0.85
MDC1-202ENST00000416571 ZNF789Q5FWF6 425 aa9.72□□□□□ -0.85
MDC1-202ENST00000416571 KDELC1Q6UW63 502 aa9.72□□□□□ -0.85
MDC1-202ENST00000416571 IGFL3Q6UXB1 125 aa9.72□□□□□ -0.85
MDC1-202ENST00000416571 HM13Q8TCT9 377 aa9.72□□□□□ -0.85
MDC1-202ENST00000416571 NAT14Q8WUY8 206 aa9.72□□□□□ -0.85
MDC1-202ENST00000416571 UBE2Q2Q8WVN8 375 aa9.72□□□□□ -0.85
MDC1-202ENST00000416571 RANBP9Q96S59 729 aa9.72□□□□□ -0.85
MDC1-202ENST00000416571 PACSIN1Q9BY11 444 aa9.72□□□□□ -0.85
MDC1-202ENST00000416571 KLHL25Q9H0H3 589 aa9.72□□□□□ -0.85
MDC1-202ENST00000416571 DEF6Q9H4E7 631 aa9.72□□□□□ -0.85
MDC1-202ENST00000416571 TXLNGQ9NUQ3 528 aa9.72□□□□□ -0.85
MDC1-202ENST00000416571 IRAK4Q9NWZ3 460 aa9.72□□□□□ -0.85
MDC1-202ENST00000416571 IFT80Q9P2H3 777 aaPredicted RBP9.72□□□□□ -0.85
MDC1-202ENST00000416571 CRLS1Q9UJA2 301 aa9.72□□□□□ -0.85
MDC1-202ENST00000416571 CAPN11Q9UMQ6 739 aa9.72□□□□□ -0.85
MDC1-202ENST00000416571 AP1M2Q9Y6Q5 423 aa9.72□□□□□ -0.85
MDC1-202ENST00000416571 DNHD1Q96M86 4753 aa9.72□□□□□ -0.85
MDC1-202ENST00000416571 CSMD1Q96PZ7 3565 aa9.72□□□□□ -0.85
MDC1-202ENST00000416571 CELSR2Q9HCU4 2923 aa9.72□□□□□ -0.85
MDC1-202ENST00000416571 CRYBG3Q68DQ2 2970 aa9.72□□□□□ -0.85
MDC1-202ENST00000416571 PCNX1Q96RV3 2341 aa9.71□□□□□ -0.85
MDC1-202ENST00000416571 PCSK5Q92824 1860 aa9.71□□□□□ -0.85
MDC1-202ENST00000416571 ARHGAP10A1A4S6 786 aa9.71□□□□□ -0.86
MDC1-202ENST00000416571 CCDC66A2RUB6 948 aa9.71□□□□□ -0.86
MDC1-202ENST00000416571 C3orf70A6NLC5 250 aaPredicted RBP9.71□□□□□ -0.86
MDC1-202ENST00000416571 CFAP99D6REC4 459 aa9.71□□□□□ -0.86
MDC1-202ENST00000416571 BTN3A1O00481 513 aa9.71□□□□□ -0.86
MDC1-202ENST00000416571 GAPDHSO14556 408 aaPredicted RBP9.71□□□□□ -0.86
MDC1-202ENST00000416571 KLF7O75840 302 aaPredicted RBP9.71□□□□□ -0.86
MDC1-202ENST00000416571 OR2B3O76000 313 aa9.71□□□□□ -0.86
MDC1-202ENST00000416571 SRP72O76094 671 aaKnown RBP9.71□□□□□ -0.86
MDC1-202ENST00000416571 TNNT1P13805 278 aa9.71□□□□□ -0.86
MDC1-202ENST00000416571 PVRP15151 417 aa9.71□□□□□ -0.86
MDC1-202ENST00000416571 ITGA3P26006 1051 aa9.71□□□□□ -0.86
MDC1-202ENST00000416571 HNRNPH3P31942 346 aaKnown RBP9.71□□□□□ -0.86
MDC1-202ENST00000416571 CD68P34810 354 aaPredicted RBP9.71□□□□□ -0.86
MDC1-202ENST00000416571 CA5AP35218 305 aa9.71□□□□□ -0.86
MDC1-202ENST00000416571 DCDP81605 110 aaKnown RBP9.71□□□□□ -0.86
MDC1-202ENST00000416571 TFDP2Q14188 446 aa9.71□□□□□ -0.86
MDC1-202ENST00000416571 PRKD1Q15139 912 aaPredicted RBP9.71□□□□□ -0.86
MDC1-202ENST00000416571 LLGL1Q15334 1064 aa9.71□□□□□ -0.86
MDC1-202ENST00000416571 BCL7AQ4VC05 210 aa9.71□□□□□ -0.86
MDC1-202ENST00000416571 C1orf189Q5VU69 101 aa9.71□□□□□ -0.86
MDC1-202ENST00000416571 IRAK1BP1Q5VVH5 260 aa9.71□□□□□ -0.86
MDC1-202ENST00000416571 SARM1Q6SZW1 724 aa9.71□□□□□ -0.86
MDC1-202ENST00000416571 Q6ZS92 163 aa9.71□□□□□ -0.86
MDC1-202ENST00000416571 CDHR3Q6ZTQ4 885 aa9.71□□□□□ -0.86
MDC1-202ENST00000416571 PID1Q7Z2X4 250 aa9.71□□□□□ -0.86
MDC1-202ENST00000416571 DAAM2Q86T65 1068 aa9.71□□□□□ -0.86
MDC1-202ENST00000416571 AMIGO1Q86WK6 493 aa9.71□□□□□ -0.86
MDC1-202ENST00000416571 ST6GALNAC3Q8NDV1 305 aa9.71□□□□□ -0.86
MDC1-202ENST00000416571 OR52E1Q8NGJ3 308 aa9.71□□□□□ -0.86
MDC1-202ENST00000416571 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.71□□□□□ -0.861e-6■■■■■ 31.4
MDC1-202ENST00000416571 MARVELD3Q96A59 401 aa9.71□□□□□ -0.86
MDC1-202ENST00000416571 ULK4Q96C45 1275 aa9.71□□□□□ -0.86
MDC1-202ENST00000416571 MRGPRX2Q96LB1 330 aa9.71□□□□□ -0.86
MDC1-202ENST00000416571 LINC00615Q96LM1 132 aaPredicted RBP9.71□□□□□ -0.86
MDC1-202ENST00000416571 TRAPPC9Q96Q05 1148 aa9.71□□□□□ -0.86
MDC1-202ENST00000416571 FCRL5Q96RD9 977 aa9.71□□□□□ -0.86
MDC1-202ENST00000416571 VAT1Q99536 393 aa9.71□□□□□ -0.86
MDC1-202ENST00000416571 WDR77Q9BQA1 342 aaPredicted RBP9.71□□□□□ -0.86
MDC1-202ENST00000416571 AP1M1Q9BXS5 423 aa9.71□□□□□ -0.86
MDC1-202ENST00000416571 PITPNM3Q9BZ71 974 aa9.71□□□□□ -0.86
MDC1-202ENST00000416571 ZNF552Q9H707 407 aaPredicted RBP9.71□□□□□ -0.86
MDC1-202ENST00000416571 RUBCNLQ9H714 662 aa9.71□□□□□ -0.86
MDC1-202ENST00000416571 VPS37BQ9H9H4 285 aa9.71□□□□□ -0.86
MDC1-202ENST00000416571 ATP13A2Q9NQ11 1180 aa9.71□□□□□ -0.86
MDC1-202ENST00000416571 P4HTMQ9NXG6 502 aa9.71□□□□□ -0.86
MDC1-202ENST00000416571 DDX56Q9NY93 547 aaKnown RBP9.71□□□□□ -0.86
MDC1-202ENST00000416571 RSPH14Q9UHP6 348 aa9.71□□□□□ -0.86
MDC1-202ENST00000416571 PCDHGA10Q9Y5H3 936 aa9.71□□□□□ -0.86
MDC1-202ENST00000416571 NUP210LQ5VU65 1888 aa9.7□□□□□ -0.86
MDC1-202ENST00000416571 CCDC88CQ9P219 2028 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms