RNA–Protein interactions for RNA: ENST00000415395.6

RFFL-205, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 1,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-205ENST00000415395 E7ENX8 843 aa11.38□□□□□ -0.59
RFFL-205ENST00000415395 H3BNH8 94 aa11.38□□□□□ -0.59
RFFL-205ENST00000415395 STX16-NPEPL1H3BU86 382 aa11.38□□□□□ -0.59
RFFL-205ENST00000415395 PFDN1O60925 122 aa11.38□□□□□ -0.59
RFFL-205ENST00000415395 BMP2P12643 396 aa11.38□□□□□ -0.59
RFFL-205ENST00000415395 CDH2P19022 906 aaPredicted RBP11.38□□□□□ -0.59
RFFL-205ENST00000415395 IMPDH1P20839 514 aa11.38□□□□□ -0.59
RFFL-205ENST00000415395 FMO4P31512 558 aa11.38□□□□□ -0.59
RFFL-205ENST00000415395 CCR10P46092 362 aa11.38□□□□□ -0.59
RFFL-205ENST00000415395 ALDH3B2P48448 385 aa11.38□□□□□ -0.59
RFFL-205ENST00000415395 CDKN1CP49918 316 aaPredicted RBP11.38□□□□□ -0.59
RFFL-205ENST00000415395 TIAL1Q01085 375 aaKnown RBP eCLIP11.38□□□□□ -0.59
RFFL-205ENST00000415395 SMAD4Q13485 552 aaKnown RBP11.38□□□□□ -0.59
RFFL-205ENST00000415395 CSHL1Q14406 222 aa11.38□□□□□ -0.59
RFFL-205ENST00000415395 CHRNA6Q15825 494 aa11.38□□□□□ -0.59
RFFL-205ENST00000415395 INTS11Q5TA45 600 aaKnown RBP11.38□□□□□ -0.59
RFFL-205ENST00000415395 ZBTB49Q6ZSB9 765 aa11.38□□□□□ -0.59
RFFL-205ENST00000415395 PARS2Q7L3T8 475 aaKnown RBP11.38□□□□□ -0.59
RFFL-205ENST00000415395 NRSN1Q8IZ57 195 aa11.38□□□□□ -0.59
RFFL-205ENST00000415395 NXPE1Q8N323 547 aa11.38□□□□□ -0.59
RFFL-205ENST00000415395 NKAPQ8N5F7 415 aaKnown RBP11.38□□□□□ -0.59
RFFL-205ENST00000415395 GPR26Q8NDV2 337 aa11.38□□□□□ -0.59
RFFL-205ENST00000415395 ST13P5Q8NFI4 369 aaPredicted RBP11.38□□□□□ -0.59
RFFL-205ENST00000415395 L3HYPDHQ96EM0 354 aa11.38□□□□□ -0.59
RFFL-205ENST00000415395 P2RY13Q9BPV8 354 aa11.38□□□□□ -0.59
RFFL-205ENST00000415395 RPP25Q9BUL9 199 aaKnown RBP11.38□□□□□ -0.59
RFFL-205ENST00000415395 C9orf16Q9BUW7 83 aa11.38□□□□□ -0.59
RFFL-205ENST00000415395 CLPBQ9H078 707 aa11.38□□□□□ -0.59
RFFL-205ENST00000415395 COQ10BQ9H8M1 238 aa11.38□□□□□ -0.59
RFFL-205ENST00000415395 PFDN4Q9NQP4 134 aa11.38□□□□□ -0.59
RFFL-205ENST00000415395 CD300AQ9UGN4 299 aa11.38□□□□□ -0.59
RFFL-205ENST00000415395 GNPTGQ9UJJ9 305 aa11.38□□□□□ -0.59
RFFL-205ENST00000415395 A0A1B0GVG6 124 aa11.37□□□□□ -0.59
RFFL-205ENST00000415395 KPNA3O00505 521 aaPredicted RBP11.37□□□□□ -0.59
RFFL-205ENST00000415395 BMP1P13497 986 aa11.37□□□□□ -0.59
RFFL-205ENST00000415395 PSMA4P25789 261 aaKnown RBP11.37□□□□□ -0.59
RFFL-205ENST00000415395 IL12RB1P42701 662 aa11.37□□□□□ -0.59
RFFL-205ENST00000415395 RAB15P59190 212 aa11.37□□□□□ -0.59
RFFL-205ENST00000415395 ATP6V0D1P61421 351 aa11.37□□□□□ -0.59
RFFL-205ENST00000415395 NFKB2Q00653 900 aa11.37□□□□□ -0.59
RFFL-205ENST00000415395 RALGDSQ12967 914 aa11.37□□□□□ -0.59
RFFL-205ENST00000415395 CRY1Q16526 586 aa11.37□□□□□ -0.59
RFFL-205ENST00000415395 COQ5Q5HYK3 327 aa11.37□□□□□ -0.59
RFFL-205ENST00000415395 CTSL3PQ5NE16 218 aa11.37□□□□□ -0.59
RFFL-205ENST00000415395 FAM46CQ5VWP2 391 aa11.37□□□□□ -0.59
RFFL-205ENST00000415395 PPP4R4Q6NUP7 873 aa11.37□□□□□ -0.59
RFFL-205ENST00000415395 LPCAT2Q7L5N7 544 aa11.37□□□□□ -0.59
RFFL-205ENST00000415395 ERMP1Q7Z2K6 904 aa11.37□□□□□ -0.59
RFFL-205ENST00000415395 EFL1Q7Z2Z2 1120 aaKnown RBP11.37□□□□□ -0.59
RFFL-205ENST00000415395 AMIGO2Q86SJ2 522 aa11.37□□□□□ -0.59
RFFL-205ENST00000415395 ZNF366Q8N895 744 aa11.37□□□□□ -0.59
RFFL-205ENST00000415395 RHEBL1Q8TAI7 183 aa11.37□□□□□ -0.59
RFFL-205ENST00000415395 DNASE1L2Q92874 299 aa11.37□□□□□ -0.59
RFFL-205ENST00000415395 RAB7BQ96AH8 199 aa11.37□□□□□ -0.59
RFFL-205ENST00000415395 FAM129BQ96TA1 746 aa11.37□□□□□ -0.59
RFFL-205ENST00000415395 HDAC8Q9BY41 377 aa11.37□□□□□ -0.59
RFFL-205ENST00000415395 DERL2Q9GZP9 239 aa11.37□□□□□ -0.59
RFFL-205ENST00000415395 MTG2Q9H4K7 406 aa11.37□□□□□ -0.59
RFFL-205ENST00000415395 C8orf33Q9H7E9 229 aaPredicted RBP11.37□□□□□ -0.59
RFFL-205ENST00000415395 CAAP1Q9H8G2 361 aa11.37□□□□□ -0.59
RFFL-205ENST00000415395 DYRK4Q9NR20 520 aa11.37□□□□□ -0.59
RFFL-205ENST00000415395 ZDHHC3Q9NYG2 299 aa11.37□□□□□ -0.59
RFFL-205ENST00000415395 CCDC167Q9P0B6 97 aa11.37□□□□□ -0.59
RFFL-205ENST00000415395 CNOT6Q9ULM6 557 aaKnown RBP11.37□□□□□ -0.59
RFFL-205ENST00000415395 FNDC3AQ9Y2H6 1198 aaKnown RBP11.37□□□□□ -0.59
RFFL-205ENST00000415395 MED16Q9Y2X0 877 aa11.37□□□□□ -0.59
RFFL-205ENST00000415395 TRAF6Q9Y4K3 522 aa11.37□□□□□ -0.59
RFFL-205ENST00000415395 CEPT1Q9Y6K0 416 aa11.37□□□□□ -0.59
RFFL-205ENST00000415395 BRWD1Q9NSI6 2320 aa11.36□□□□□ -0.59
RFFL-205ENST00000415395 IGLV3-16A0A075B6K0 115 aa11.36□□□□□ -0.59
RFFL-205ENST00000415395 E5RI56 91 aa11.36□□□□□ -0.59
RFFL-205ENST00000415395 ANGPT2O15123 496 aa11.36□□□□□ -0.59
RFFL-205ENST00000415395 AKAP10O43572 662 aa11.36□□□□□ -0.59
RFFL-205ENST00000415395 JUNP05412 331 aaKnown RBP11.36□□□□□ -0.59
RFFL-205ENST00000415395 EPHX1P07099 455 aa11.36□□□□□ -0.59
RFFL-205ENST00000415395 HLA-EP13747 358 aa11.36□□□□□ -0.59
RFFL-205ENST00000415395 CD1DP15813 335 aa11.36□□□□□ -0.59
RFFL-205ENST00000415395 MSX2P35548 267 aaPredicted RBP11.36□□□□□ -0.59
RFFL-205ENST00000415395 NSG1P42857 185 aa11.36□□□□□ -0.59
RFFL-205ENST00000415395 ATXN3P54252 364 aaPredicted RBP11.36□□□□□ -0.59
RFFL-205ENST00000415395 NME5P56597 212 aa11.36□□□□□ -0.59
RFFL-205ENST00000415395 NRF1Q16656 503 aa11.36□□□□□ -0.59
RFFL-205ENST00000415395 EGFLAMQ63HQ2 1017 aa11.36□□□□□ -0.59
RFFL-205ENST00000415395 TMEM207Q6UWW9 146 aa11.36□□□□□ -0.59
RFFL-205ENST00000415395 MACC1Q6ZN28 852 aa11.36□□□□□ -0.59
RFFL-205ENST00000415395 CYP2U1Q7Z449 544 aa11.36□□□□□ -0.59
RFFL-205ENST00000415395 GPR141Q7Z602 305 aa11.36□□□□□ -0.59
RFFL-205ENST00000415395 PIM3Q86V86 326 aa11.36□□□□□ -0.59
RFFL-205ENST00000415395 RALGPS2Q86X27 583 aaPredicted RBP11.36□□□□□ -0.59
RFFL-205ENST00000415395 SFTPA1Q8IWL2 248 aa11.36□□□□□ -0.59
RFFL-205ENST00000415395 CLYBLQ8N0X4 340 aa11.36□□□□□ -0.59
RFFL-205ENST00000415395 TRAM1L1Q8N609 369 aa11.36□□□□□ -0.59
RFFL-205ENST00000415395 PNPLA1Q8N8W4 532 aa11.36□□□□□ -0.59
RFFL-205ENST00000415395 MFSD2AQ8NA29 543 aa11.36□□□□□ -0.59
RFFL-205ENST00000415395 RNF217Q8TC41 542 aa11.36□□□□□ -0.59
RFFL-205ENST00000415395 TSPEARQ8WU66 669 aa11.36□□□□□ -0.59
RFFL-205ENST00000415395 ANKRD49Q8WVL7 239 aa11.36□□□□□ -0.59
RFFL-205ENST00000415395 LRTOMTQ8WZ04 291 aa11.36□□□□□ -0.59
RFFL-205ENST00000415395 C19orf60Q96EN9 201 aa11.36□□□□□ -0.59
RFFL-205ENST00000415395 SGF29Q96ES7 293 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms