RNA–Protein interactions for RNA: ENST00000413593.5

TMEM248-202, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-202ENST00000413593 BBS9Q3SYG4 887 aa9.81□□□□□ -0.84
TMEM248-202ENST00000413593 DNAJC21Q5F1R6 531 aaKnown RBP9.81□□□□□ -0.84
TMEM248-202ENST00000413593 CTSL3PQ5NE16 218 aa9.81□□□□□ -0.84
TMEM248-202ENST00000413593 ZNF470Q6ECI4 717 aa9.81□□□□□ -0.84
TMEM248-202ENST00000413593 IRGCQ6NXR0 463 aa9.81□□□□□ -0.84
TMEM248-202ENST00000413593 PRSS42Q7Z5A4 293 aa9.81□□□□□ -0.84
TMEM248-202ENST00000413593 SLC22A15Q8IZD6 547 aa9.81□□□□□ -0.84
TMEM248-202ENST00000413593 KRT222Q8N1A0 295 aa9.81□□□□□ -0.84
TMEM248-202ENST00000413593 BMPERQ8N8U9 685 aa9.81□□□□□ -0.84
TMEM248-202ENST00000413593 PHC3Q8NDX5 983 aa9.81□□□□□ -0.84
TMEM248-202ENST00000413593 ASZ1Q8WWH4 475 aa9.81□□□□□ -0.84
TMEM248-202ENST00000413593 USP7Q93009 1102 aa9.81□□□□□ -0.84
TMEM248-202ENST00000413593 PMEPA1Q969W9 287 aa9.81□□□□□ -0.84
TMEM248-202ENST00000413593 ZDHHC12Q96GR4 267 aa9.81□□□□□ -0.84
TMEM248-202ENST00000413593 SNF8Q96H20 258 aa9.81□□□□□ -0.84
TMEM248-202ENST00000413593 C16orf45Q96MC5 204 aaPredicted RBP9.81□□□□□ -0.84
TMEM248-202ENST00000413593 PWWP2AQ96N64 755 aa9.81□□□□□ -0.84
TMEM248-202ENST00000413593 BIRC8Q96P09 236 aa9.81□□□□□ -0.84
TMEM248-202ENST00000413593 PANX3Q96QZ0 392 aa9.81□□□□□ -0.84
TMEM248-202ENST00000413593 FERD3LQ96RJ6 166 aa9.81□□□□□ -0.84
TMEM248-202ENST00000413593 EBNA1BP2Q99848 306 aaKnown RBP9.81□□□□□ -0.84
TMEM248-202ENST00000413593 TRIM31Q9BZY9 425 aa9.81□□□□□ -0.84
TMEM248-202ENST00000413593 B3GNT4Q9C0J1 378 aa9.81□□□□□ -0.84
TMEM248-202ENST00000413593 ZNF768Q9H5H4 540 aaKnown RBP9.81□□□□□ -0.84
TMEM248-202ENST00000413593 OCIAD1Q9NX40 245 aa9.81□□□□□ -0.84
TMEM248-202ENST00000413593 FOXJ2Q9P0K8 574 aa9.81□□□□□ -0.84
TMEM248-202ENST00000413593 ACSL6Q9UKU0 697 aa9.81□□□□□ -0.84
TMEM248-202ENST00000413593 CDYLQ9Y232 598 aa9.81□□□□□ -0.84
TMEM248-202ENST00000413593 FAM169AQ9Y6X4 670 aa9.81□□□□□ -0.84
TMEM248-202ENST00000413593 ZFC3H1O60293 1989 aaKnown RBP9.81□□□□□ -0.84
TMEM248-202ENST00000413593 ZZEF1O43149 2961 aa9.81□□□□□ -0.84
TMEM248-202ENST00000413593 UNC13CQ8NB66 2214 aa9.8□□□□□ -0.84
TMEM248-202ENST00000413593 DMXL2Q8TDJ6 3036 aa9.8□□□□□ -0.84
TMEM248-202ENST00000413593 OR6C74A6NCV1 312 aa9.8□□□□□ -0.84
TMEM248-202ENST00000413593 FAM187AA6NFU0 413 aa9.8□□□□□ -0.84
TMEM248-202ENST00000413593 EFCAB7A8K855 629 aa9.8□□□□□ -0.84
TMEM248-202ENST00000413593 SLCO2B1O94956 709 aa9.8□□□□□ -0.84
TMEM248-202ENST00000413593 TTC4O95801 387 aa9.8□□□□□ -0.84
TMEM248-202ENST00000413593 S1PR4O95977 384 aa9.8□□□□□ -0.84
TMEM248-202ENST00000413593 ESR1P03372 595 aa9.8□□□□□ -0.84
TMEM248-202ENST00000413593 APOA4P06727 396 aa9.8□□□□□ -0.84
TMEM248-202ENST00000413593 F7P08709 466 aaPredicted RBP9.8□□□□□ -0.84
TMEM248-202ENST00000413593 ITPKBP27987 946 aa9.8□□□□□ -0.84
TMEM248-202ENST00000413593 FMO4P31512 558 aa9.8□□□□□ -0.84
TMEM248-202ENST00000413593 RPL21P46778 160 aaKnown RBP9.8□□□□□ -0.84
TMEM248-202ENST00000413593 MRPS25P82663 173 aaKnown RBP9.8□□□□□ -0.84
TMEM248-202ENST00000413593 C2orf54Q08AI8 447 aa9.8□□□□□ -0.84
TMEM248-202ENST00000413593 CTBP1Q13363 440 aa9.8□□□□□ -0.84
TMEM248-202ENST00000413593 CRYMQ14894 314 aa9.8□□□□□ -0.84
TMEM248-202ENST00000413593 TMED2Q15363 201 aa9.8□□□□□ -0.84
TMEM248-202ENST00000413593 ZNF789Q5FWF6 425 aa9.8□□□□□ -0.84
TMEM248-202ENST00000413593 TMEM164Q5U3C3 297 aa9.8□□□□□ -0.84
TMEM248-202ENST00000413593 CACHD1Q5VU97 1274 aa9.8□□□□□ -0.84
TMEM248-202ENST00000413593 LRRC69Q6ZNQ3 347 aa9.8□□□□□ -0.84
TMEM248-202ENST00000413593 FAM92BQ6ZTR7 304 aa9.8□□□□□ -0.84
TMEM248-202ENST00000413593 ZNF572Q7Z3I7 529 aaPredicted RBP9.8□□□□□ -0.84
TMEM248-202ENST00000413593 OOSP2Q86WS3 158 aa9.8□□□□□ -0.84
TMEM248-202ENST00000413593 FAM129CQ86XR2 697 aa9.8□□□□□ -0.84
TMEM248-202ENST00000413593 VRK3Q8IV63 474 aa9.8□□□□□ -0.84
TMEM248-202ENST00000413593 IGDCC3Q8IVU1 814 aa9.8□□□□□ -0.84
TMEM248-202ENST00000413593 DENND6AQ8IWF6 608 aa9.8□□□□□ -0.84
TMEM248-202ENST00000413593 SPACA3Q8IXA5 215 aa9.8□□□□□ -0.84
TMEM248-202ENST00000413593 LMNTD2Q8IXW0 634 aa9.8□□□□□ -0.84
TMEM248-202ENST00000413593 TBC1D21Q8IYX1 336 aa9.8□□□□□ -0.84
TMEM248-202ENST00000413593 UNC5BQ8IZJ1 945 aa9.8□□□□□ -0.84
TMEM248-202ENST00000413593 PDIK1LQ8N165 341 aa9.8□□□□□ -0.84
TMEM248-202ENST00000413593 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.8□□□□□ -0.84
TMEM248-202ENST00000413593 OR4E2Q8NGC2 313 aa9.8□□□□□ -0.84
TMEM248-202ENST00000413593 OR52E1Q8NGJ3 308 aa9.8□□□□□ -0.84
TMEM248-202ENST00000413593 OR5AR1Q8NGP9 310 aa9.8□□□□□ -0.84
TMEM248-202ENST00000413593 KCNE4Q8WWG9 221 aa9.8□□□□□ -0.84
TMEM248-202ENST00000413593 LCN9Q8WX39 176 aa9.8□□□□□ -0.84
TMEM248-202ENST00000413593 ART4Q93070 314 aa9.8□□□□□ -0.84
TMEM248-202ENST00000413593 NAF1Q96HR8 494 aaKnown RBP9.8□□□□□ -0.84
TMEM248-202ENST00000413593 TAAR9Q96RI9 348 aa9.8□□□□□ -0.84
TMEM248-202ENST00000413593 NRTNQ99748 197 aa9.8□□□□□ -0.84
TMEM248-202ENST00000413593 WDR83Q9BRX9 315 aaKnown RBP9.8□□□□□ -0.84
TMEM248-202ENST00000413593 NAT9Q9BTE0 207 aa9.8□□□□□ -0.84
TMEM248-202ENST00000413593 HGH1Q9BTY7 390 aa9.8□□□□□ -0.84
TMEM248-202ENST00000413593 DDA1Q9BW61 102 aa9.8□□□□□ -0.84
TMEM248-202ENST00000413593 SRMSQ9H3Y6 488 aa9.8□□□□□ -0.84
TMEM248-202ENST00000413593 TFB2MQ9H5Q4 396 aaKnown RBP9.8□□□□□ -0.84
TMEM248-202ENST00000413593 C20orf96Q9NUD7 363 aaPredicted RBP9.8□□□□□ -0.84
TMEM248-202ENST00000413593 INTS10Q9NVR2 710 aaKnown RBP9.8□□□□□ -0.84
TMEM248-202ENST00000413593 HRASLS2Q9NWW9 162 aa9.8□□□□□ -0.84
TMEM248-202ENST00000413593 SIDT1Q9NXL6 827 aaKnown RBP9.8□□□□□ -0.84
TMEM248-202ENST00000413593 SLC39A1Q9NY26 324 aa9.8□□□□□ -0.84
TMEM248-202ENST00000413593 SEMA5BQ9P283 1151 aa9.8□□□□□ -0.84
TMEM248-202ENST00000413593 ASF1AQ9Y294 204 aa9.8□□□□□ -0.84
TMEM248-202ENST00000413593 VPS9D1Q9Y2B5 631 aa9.8□□□□□ -0.84
TMEM248-202ENST00000413593 CRYL1Q9Y2S2 319 aa9.8□□□□□ -0.84
TMEM248-202ENST00000413593 SNX24Q9Y343 169 aa9.8□□□□□ -0.84
TMEM248-202ENST00000413593 PCDHGA3Q9Y5H0 932 aa9.8□□□□□ -0.84
TMEM248-202ENST00000413593 URB1O60287 2271 aaKnown RBP9.8□□□□□ -0.84
TMEM248-202ENST00000413593 H3BMM5 538 aa9.79□□□□□ -0.84
TMEM248-202ENST00000413593 BTN3A3O00478 584 aa9.79□□□□□ -0.84
TMEM248-202ENST00000413593 KPNA5O15131 536 aa9.79□□□□□ -0.84
TMEM248-202ENST00000413593 RAD51CO43502 376 aa9.79□□□□□ -0.84
TMEM248-202ENST00000413593 NIPSNAP2O75323 286 aa9.79□□□□□ -0.84
TMEM248-202ENST00000413593 RASSF9O75901 435 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms