RNA–Protein interactions for RNA: ENST00000413374.1

NCKIPSD-202, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-202ENST00000413374 NLRP9Q7RTR0 991 aa9.9□□□□□ -0.82
NCKIPSD-202ENST00000413374 PPP1R3BQ86XI6 285 aa9.9□□□□□ -0.82
NCKIPSD-202ENST00000413374 MPP5Q8N3R9 675 aa9.9□□□□□ -0.82
NCKIPSD-202ENST00000413374 RASGEF1CQ8N431 466 aa9.9□□□□□ -0.82
NCKIPSD-202ENST00000413374 OTUD6BQ8N6M0 293 aa9.9□□□□□ -0.82
NCKIPSD-202ENST00000413374 EXD3Q8N9H8 876 aa9.9□□□□□ -0.82
NCKIPSD-202ENST00000413374 LMNTD1Q8N9Z9 388 aa9.9□□□□□ -0.82
NCKIPSD-202ENST00000413374 ACVR1CQ8NER5 493 aa9.9□□□□□ -0.82
NCKIPSD-202ENST00000413374 OR5AR1Q8NGP9 310 aa9.9□□□□□ -0.82
NCKIPSD-202ENST00000413374 CFAP61Q8NHU2 1237 aa9.9□□□□□ -0.82
NCKIPSD-202ENST00000413374 LKAAEAR1Q8TD35 194 aa9.9□□□□□ -0.82
NCKIPSD-202ENST00000413374 SNRNP27Q8WVK2 155 aaKnown RBP9.9□□□□□ -0.82
NCKIPSD-202ENST00000413374 ZFPM2Q8WW38 1151 aa9.9□□□□□ -0.82
NCKIPSD-202ENST00000413374 UBXN4Q92575 508 aa9.9□□□□□ -0.82
NCKIPSD-202ENST00000413374 MFSD3Q96ES6 412 aa9.9□□□□□ -0.82
NCKIPSD-202ENST00000413374 SLC41A2Q96JW4 573 aa9.9□□□□□ -0.82
NCKIPSD-202ENST00000413374 TRIM56Q9BRZ2 755 aaKnown RBP9.9□□□□□ -0.82
NCKIPSD-202ENST00000413374 ZPBPQ9BS86 351 aa9.9□□□□□ -0.82
NCKIPSD-202ENST00000413374 GPN2Q9H9Y4 310 aaPredicted RBP9.9□□□□□ -0.82
NCKIPSD-202ENST00000413374 PDE7BQ9NP56 450 aa9.9□□□□□ -0.82
NCKIPSD-202ENST00000413374 EIF2B3Q9NR50 452 aaKnown RBP9.9□□□□□ -0.82
NCKIPSD-202ENST00000413374 CATSPERZQ9NTU4 200 aa9.9□□□□□ -0.82
NCKIPSD-202ENST00000413374 SOHLH2Q9NX45 425 aa9.9□□□□□ -0.82
NCKIPSD-202ENST00000413374 CIDEBQ9UHD4 219 aa9.9□□□□□ -0.82
NCKIPSD-202ENST00000413374 IL17BQ9UHF5 180 aa9.9□□□□□ -0.82
NCKIPSD-202ENST00000413374 LNPEPQ9UIQ6 1025 aa9.9□□□□□ -0.82
NCKIPSD-202ENST00000413374 ASF1AQ9Y294 204 aa9.9□□□□□ -0.82
NCKIPSD-202ENST00000413374 MRPS18BQ9Y676 258 aaKnown RBP9.9□□□□□ -0.82
NCKIPSD-202ENST00000413374 NBEAQ8NFP9 2946 aa9.89□□□□□ -0.83
NCKIPSD-202ENST00000413374 SLC5A10A0PJK1 596 aa9.89□□□□□ -0.83
NCKIPSD-202ENST00000413374 BHMG1C9JSJ3 638 aaPredicted RBP9.89□□□□□ -0.83
NCKIPSD-202ENST00000413374 BTN3A1O00481 513 aa9.89□□□□□ -0.83
NCKIPSD-202ENST00000413374 LIN7AO14910 233 aaPredicted RBP9.89□□□□□ -0.83
NCKIPSD-202ENST00000413374 ZSCAN12O43309 604 aa9.89□□□□□ -0.83
NCKIPSD-202ENST00000413374 KATNA1O75449 491 aa9.89□□□□□ -0.83
NCKIPSD-202ENST00000413374 NDUFS3O75489 264 aa9.89□□□□□ -0.83
NCKIPSD-202ENST00000413374 VAPBO95292 243 aa9.89□□□□□ -0.83
NCKIPSD-202ENST00000413374 DLGAP3O95886 979 aa9.89□□□□□ -0.83
NCKIPSD-202ENST00000413374 F7P08709 466 aaPredicted RBP9.89□□□□□ -0.83
NCKIPSD-202ENST00000413374 ATXN8OSP0DMR3 200 aa9.89□□□□□ -0.83
NCKIPSD-202ENST00000413374 FGF5P12034 268 aa9.89□□□□□ -0.83
NCKIPSD-202ENST00000413374 PVRP15151 417 aa9.89□□□□□ -0.83
NCKIPSD-202ENST00000413374 F8A1P23610 371 aa9.89□□□□□ -0.83
NCKIPSD-202ENST00000413374 PRDX3P30048 256 aaKnown RBP9.89□□□□□ -0.83
NCKIPSD-202ENST00000413374 CD151P48509 253 aa9.89□□□□□ -0.83
NCKIPSD-202ENST00000413374 HSD11B2P80365 405 aa9.89□□□□□ -0.83
NCKIPSD-202ENST00000413374 ACVR1Q04771 509 aa9.89□□□□□ -0.83
NCKIPSD-202ENST00000413374 C19orf57Q0VDD7 668 aa9.89□□□□□ -0.83
NCKIPSD-202ENST00000413374 RPA4Q13156 261 aa9.89□□□□□ -0.83
NCKIPSD-202ENST00000413374 IL11RAQ14626 422 aa9.89□□□□□ -0.83
NCKIPSD-202ENST00000413374 ATP1A1-AS1Q5TC04 95 aa9.89□□□□□ -0.83
NCKIPSD-202ENST00000413374 PRAMEF17Q5VTA0 474 aa9.89□□□□□ -0.83
NCKIPSD-202ENST00000413374 PTRHD1Q6GMV3 140 aaKnown RBP9.89□□□□□ -0.83
NCKIPSD-202ENST00000413374 PWWP2BQ6NUJ5 590 aa9.89□□□□□ -0.83
NCKIPSD-202ENST00000413374 CASC4Q6P4E1 433 aa9.89□□□□□ -0.83
NCKIPSD-202ENST00000413374 FAM199XQ6PEV8 388 aaPredicted RBP9.89□□□□□ -0.83
NCKIPSD-202ENST00000413374 CCDC137Q6PK04 289 aaKnown RBP9.89□□□□□ -0.83
NCKIPSD-202ENST00000413374 TRIM73Q86UV7 250 aa9.89□□□□□ -0.83
NCKIPSD-202ENST00000413374 AMIGO1Q86WK6 493 aa9.89□□□□□ -0.83
NCKIPSD-202ENST00000413374 VRK3Q8IV63 474 aa9.89□□□□□ -0.83
NCKIPSD-202ENST00000413374 ZNF843Q8N446 348 aa9.89□□□□□ -0.83
NCKIPSD-202ENST00000413374 C2orf73Q8N5S3 287 aaPredicted RBP9.89□□□□□ -0.83
NCKIPSD-202ENST00000413374 KIAA1143Q96AT1 154 aaPredicted RBP9.89□□□□□ -0.83
NCKIPSD-202ENST00000413374 STAMBPL1Q96FJ0 436 aa9.89□□□□□ -0.83
NCKIPSD-202ENST00000413374 OSBPL9Q96SU4 736 aa9.89□□□□□ -0.83
NCKIPSD-202ENST00000413374 SLC12A9Q9BXP2 914 aa9.89□□□□□ -0.83
NCKIPSD-202ENST00000413374 IL22Q9GZX6 179 aa9.89□□□□□ -0.83
NCKIPSD-202ENST00000413374 MVB12BQ9H7P6 319 aa9.89□□□□□ -0.83
NCKIPSD-202ENST00000413374 AKIRIN1Q9H9L7 192 aaPredicted RBP9.89□□□□□ -0.83
NCKIPSD-202ENST00000413374 FGF21Q9NSA1 209 aa9.89□□□□□ -0.83
NCKIPSD-202ENST00000413374 TREX1Q9NSU2 369 aa9.89□□□□□ -0.83
NCKIPSD-202ENST00000413374 IL1RAPL1Q9NZN1 696 aa9.89□□□□□ -0.83
NCKIPSD-202ENST00000413374 TSR3Q9UJK0 312 aaKnown RBP9.89□□□□□ -0.83
NCKIPSD-202ENST00000413374 RARRES3Q9UL19 164 aa9.89□□□□□ -0.83
NCKIPSD-202ENST00000413374 RIMKLBQ9ULI2 386 aa9.89□□□□□ -0.83
NCKIPSD-202ENST00000413374 TMEM184BQ9Y519 407 aaPredicted RBP9.89□□□□□ -0.83
NCKIPSD-202ENST00000413374 RPS6KL1Q9Y6S9 549 aa9.89□□□□□ -0.83
NCKIPSD-202ENST00000413374 ZFYVE26Q68DK2 2539 aa9.88□□□□□ -0.83
NCKIPSD-202ENST00000413374 TLCD2A6NGC4 264 aa9.88□□□□□ -0.83
NCKIPSD-202ENST00000413374 USP27XA6NNY8 438 aa9.88□□□□□ -0.83
NCKIPSD-202ENST00000413374 TK2O00142 265 aa9.88□□□□□ -0.83
NCKIPSD-202ENST00000413374 QSOX1O00391 747 aa9.88□□□□□ -0.83
NCKIPSD-202ENST00000413374 KIF5CO60282 957 aa9.88□□□□□ -0.83
NCKIPSD-202ENST00000413374 FAM87AP0C7U9 286 aa9.88□□□□□ -0.83
NCKIPSD-202ENST00000413374 CCNYL3P0C7X3 344 aa9.88□□□□□ -0.83
NCKIPSD-202ENST00000413374 TPBGLP0DKB5 382 aa9.88□□□□□ -0.83
NCKIPSD-202ENST00000413374 TPSB2P20231 275 aa9.88□□□□□ -0.83
NCKIPSD-202ENST00000413374 ACADLP28330 430 aa9.88□□□□□ -0.83
NCKIPSD-202ENST00000413374 FMO4P31512 558 aa9.88□□□□□ -0.83
NCKIPSD-202ENST00000413374 DLSTP36957 453 aa9.88□□□□□ -0.83
NCKIPSD-202ENST00000413374 PPARGP37231 505 aaPredicted RBP9.88□□□□□ -0.83
NCKIPSD-202ENST00000413374 ACY1Q03154 408 aa9.88□□□□□ -0.83
NCKIPSD-202ENST00000413374 ABHD18Q0P651 414 aa9.88□□□□□ -0.83
NCKIPSD-202ENST00000413374 KCNJ11Q14654 390 aa9.88□□□□□ -0.83
NCKIPSD-202ENST00000413374 TPSAB1Q15661 275 aa9.88□□□□□ -0.83
NCKIPSD-202ENST00000413374 TMTC4Q5T4D3 741 aa9.88□□□□□ -0.83
NCKIPSD-202ENST00000413374 PACS1Q6VY07 963 aa9.88□□□□□ -0.83
NCKIPSD-202ENST00000413374 UNC5AQ6ZN44 842 aa9.88□□□□□ -0.83
NCKIPSD-202ENST00000413374 SPNS2Q8IVW8 549 aa9.88□□□□□ -0.83
NCKIPSD-202ENST00000413374 FAM20CQ8IXL6 584 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms