RNA–Protein interactions for RNA: ENST00000413333.1

HMGB3P31-201, Transcript of high mobility group box 3 pseudogene 31, humanhuman

BASIC

Gene HMGB3P31, Length 595 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P31-201ENST00000413333 MFSD12Q6NUT3 480 aa4.58□□□□□ -1.68
HMGB3P31-201ENST00000413333 ZNF549Q6P9A3 640 aa4.58□□□□□ -1.68
HMGB3P31-201ENST00000413333 ZNF704Q6ZNC4 412 aaPredicted RBP4.58□□□□□ -1.68
HMGB3P31-201ENST00000413333 TMPRSS11BQ86T26 416 aa4.58□□□□□ -1.68
HMGB3P31-201ENST00000413333 COMMD2Q86X83 199 aa4.58□□□□□ -1.68
HMGB3P31-201ENST00000413333 UNC45BQ8IWX7 931 aa4.58□□□□□ -1.68
HMGB3P31-201ENST00000413333 TUSC5Q8IXB3 177 aa4.58□□□□□ -1.68
HMGB3P31-201ENST00000413333 CFAP206Q8IYR0 622 aa4.58□□□□□ -1.68
HMGB3P31-201ENST00000413333 SYCP3Q8IZU3 236 aa4.58□□□□□ -1.68
HMGB3P31-201ENST00000413333 C1orf87Q8N0U7 546 aa4.58□□□□□ -1.68
HMGB3P31-201ENST00000413333 GRAPLQ8TC17 118 aaPredicted RBP4.58□□□□□ -1.68
HMGB3P31-201ENST00000413333 MGARPQ8TDB4 240 aa4.58□□□□□ -1.68
HMGB3P31-201ENST00000413333 TMEM255BQ8WV15 326 aa4.58□□□□□ -1.68
HMGB3P31-201ENST00000413333 NSMAFQ92636 917 aa4.58□□□□□ -1.68
HMGB3P31-201ENST00000413333 MOB3AQ96BX8 217 aa4.58□□□□□ -1.68
HMGB3P31-201ENST00000413333 HMCESQ96FZ2 354 aa4.58□□□□□ -1.68
HMGB3P31-201ENST00000413333 ERO1AQ96HE7 468 aa4.58□□□□□ -1.68
HMGB3P31-201ENST00000413333 LRRC3BQ96PB8 259 aa4.58□□□□□ -1.68
HMGB3P31-201ENST00000413333 FUT8Q9BYC5 575 aa4.58□□□□□ -1.68
HMGB3P31-201ENST00000413333 FN3KQ9H479 309 aa4.58□□□□□ -1.68
HMGB3P31-201ENST00000413333 TRPC7Q9HCX4 862 aa4.58□□□□□ -1.68
HMGB3P31-201ENST00000413333 SEPT10Q9P0V9 454 aa4.58□□□□□ -1.68
HMGB3P31-201ENST00000413333 ABT1Q9ULW3 272 aaKnown RBP4.58□□□□□ -1.68
HMGB3P31-201ENST00000413333 A0A087WV48 116 aa4.57□□□□□ -1.68
HMGB3P31-201ENST00000413333 LILRA5A6NI73 299 aa4.57□□□□□ -1.68
HMGB3P31-201ENST00000413333 C15orf62A8K5M9 175 aa4.57□□□□□ -1.68
HMGB3P31-201ENST00000413333 ANKRD66B4E2M5 251 aa4.57□□□□□ -1.68
HMGB3P31-201ENST00000413333 EIF3DO15371 548 aaKnown RBP eCLIP4.57□□□□□ -1.68
HMGB3P31-201ENST00000413333 ZNHIT1O43257 154 aa4.57□□□□□ -1.68
HMGB3P31-201ENST00000413333 OR10H2O60403 315 aa4.57□□□□□ -1.68
HMGB3P31-201ENST00000413333 CAMTA2O94983 1202 aa4.57□□□□□ -1.68
HMGB3P31-201ENST00000413333 SIX3O95343 332 aaPredicted RBP4.57□□□□□ -1.68
HMGB3P31-201ENST00000413333 LDLRP01130 860 aa4.57□□□□□ -1.68
HMGB3P31-201ENST00000413333 ITGA2P17301 1181 aa4.57□□□□□ -1.68
HMGB3P31-201ENST00000413333 ADRA2CP18825 462 aa4.57□□□□□ -1.68
HMGB3P31-201ENST00000413333 GNAZP19086 355 aa4.57□□□□□ -1.68
HMGB3P31-201ENST00000413333 ACAT1P24752 427 aaKnown RBP4.57□□□□□ -1.68
HMGB3P31-201ENST00000413333 PSMA3P25788 255 aa4.57□□□□□ -1.68
HMGB3P31-201ENST00000413333 KCNJ1P48048 391 aa4.57□□□□□ -1.68
HMGB3P31-201ENST00000413333 ASCL1P50553 236 aa4.57□□□□□ -1.68
HMGB3P31-201ENST00000413333 RUNX1T1Q06455 604 aa4.57□□□□□ -1.68
HMGB3P31-201ENST00000413333 PNRC1Q12796 327 aaPredicted RBP4.57□□□□□ -1.68
HMGB3P31-201ENST00000413333 GTF2H2Q13888 395 aa4.57□□□□□ -1.68
HMGB3P31-201ENST00000413333 RCN2Q14257 317 aa4.57□□□□□ -1.68
HMGB3P31-201ENST00000413333 ZNF234Q14588 700 aa4.57□□□□□ -1.68
HMGB3P31-201ENST00000413333 NFATC4Q14934 902 aa4.57□□□□□ -1.68
HMGB3P31-201ENST00000413333 TWIST1Q15672 202 aa4.57□□□□□ -1.68
HMGB3P31-201ENST00000413333 ANKRD20A4Q4UJ75 823 aa4.57□□□□□ -1.68
HMGB3P31-201ENST00000413333 ANKRD20A8PQ5CZ79 823 aa4.57□□□□□ -1.68
HMGB3P31-201ENST00000413333 ANKRD20A2Q5SQ80 823 aa4.57□□□□□ -1.68
HMGB3P31-201ENST00000413333 NDUFAF5Q5TEU4 345 aa4.57□□□□□ -1.68
HMGB3P31-201ENST00000413333 ANKRD20A1Q5TYW2 823 aa4.57□□□□□ -1.68
HMGB3P31-201ENST00000413333 ANKRD20A3Q5VUR7 823 aa4.57□□□□□ -1.68
HMGB3P31-201ENST00000413333 PRR27Q6MZM9 219 aa4.57□□□□□ -1.68
HMGB3P31-201ENST00000413333 TRNP1Q6NT89 227 aa4.57□□□□□ -1.68
HMGB3P31-201ENST00000413333 GTF2H2CQ6P1K8 395 aa4.57□□□□□ -1.68
HMGB3P31-201ENST00000413333 RAPH1Q70E73 1250 aa4.57□□□□□ -1.68
HMGB3P31-201ENST00000413333 DGLUCYQ7Z3D6 616 aa4.57□□□□□ -1.68
HMGB3P31-201ENST00000413333 PTOV1Q86YD1 416 aa4.57□□□□□ -1.68
HMGB3P31-201ENST00000413333 CLIP4Q8N3C7 705 aa4.57□□□□□ -1.68
HMGB3P31-201ENST00000413333 ZNF611Q8N823 705 aa4.57□□□□□ -1.68
HMGB3P31-201ENST00000413333 ARL10Q8N8L6 244 aa4.57□□□□□ -1.68
HMGB3P31-201ENST00000413333 NHLRC2Q8NBF2 726 aa4.57□□□□□ -1.68
HMGB3P31-201ENST00000413333 ZNF114Q8NC26 417 aa4.57□□□□□ -1.68
HMGB3P31-201ENST00000413333 FIBINQ8TAL6 211 aa4.57□□□□□ -1.68
HMGB3P31-201ENST00000413333 HEXDCQ8WVB3 486 aa4.57□□□□□ -1.68
HMGB3P31-201ENST00000413333 CDCA5Q96FF9 252 aa4.57□□□□□ -1.68
HMGB3P31-201ENST00000413333 BSCL2Q96G97 398 aaPredicted RBP4.57□□□□□ -1.68
HMGB3P31-201ENST00000413333 CAMK1GQ96NX5 476 aa4.57□□□□□ -1.68
HMGB3P31-201ENST00000413333 INPP5KQ9BT40 448 aa4.57□□□□□ -1.68
HMGB3P31-201ENST00000413333 MRPL44Q9H9J2 332 aaKnown RBP4.57□□□□□ -1.68
HMGB3P31-201ENST00000413333 ZNF224Q9NZL3 707 aa4.57□□□□□ -1.68
HMGB3P31-201ENST00000413333 IGSF1Q8N6C5 1336 aa4.56□□□□□ -1.68
HMGB3P31-201ENST00000413333 IGLV5-37A0A075B6J1 123 aa4.56□□□□□ -1.68
HMGB3P31-201ENST00000413333 NEMP2A6NFY4 417 aa4.56□□□□□ -1.68
HMGB3P31-201ENST00000413333 DVL1O14640 695 aa4.56□□□□□ -1.68
HMGB3P31-201ENST00000413333 IFIT3O14879 490 aaKnown RBP4.56□□□□□ -1.68
HMGB3P31-201ENST00000413333 ZNF263O14978 683 aa4.56□□□□□ -1.68
HMGB3P31-201ENST00000413333 WDR1O75083 606 aa4.56□□□□□ -1.68
HMGB3P31-201ENST00000413333 PMS2P2O95744 297 aa4.56□□□□□ -1.68
HMGB3P31-201ENST00000413333 TOMM40O96008 361 aa4.56□□□□□ -1.68
HMGB3P31-201ENST00000413333 LIPFP07098 398 aa4.56□□□□□ -1.68
HMGB3P31-201ENST00000413333 FAM106CPP0CH98 169 aa4.56□□□□□ -1.68
HMGB3P31-201ENST00000413333 SMIM18P0DKX4 95 aa4.56□□□□□ -1.68
HMGB3P31-201ENST00000413333 ACP2P11117 423 aa4.56□□□□□ -1.68
HMGB3P31-201ENST00000413333 SCP2P22307 547 aa4.56□□□□□ -1.68
HMGB3P31-201ENST00000413333 TKTP29401 623 aaKnown RBP4.56□□□□□ -1.68
HMGB3P31-201ENST00000413333 ATP6V1E1P36543 226 aa4.56□□□□□ -1.68
HMGB3P31-201ENST00000413333 HNF4AP41235 474 aa4.56□□□□□ -1.68
HMGB3P31-201ENST00000413333 NAGLUP54802 743 aa4.56□□□□□ -1.68
HMGB3P31-201ENST00000413333 UBASH3AP57075 661 aa4.56□□□□□ -1.68
HMGB3P31-201ENST00000413333 RELQ04864 619 aaPredicted RBP4.56□□□□□ -1.68
HMGB3P31-201ENST00000413333 C17orf67Q0P5P2 114 aa4.56□□□□□ -1.68
HMGB3P31-201ENST00000413333 COASYQ13057 564 aa4.56□□□□□ -1.68
HMGB3P31-201ENST00000413333 CDC37Q16543 378 aaPredicted RBP4.56□□□□□ -1.68
HMGB3P31-201ENST00000413333 MEP1BQ16820 701 aa4.56□□□□□ -1.68
HMGB3P31-201ENST00000413333 CCDC158Q5M9N0 1113 aa4.56□□□□□ -1.68
HMGB3P31-201ENST00000413333 IRAK1BP1Q5VVH5 260 aa4.56□□□□□ -1.68
HMGB3P31-201ENST00000413333 DPY19L2P1Q6NXN4 242 aa4.56□□□□□ -1.68
HMGB3P31-201ENST00000413333 ENPP7Q6UWV6 458 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms