RNA–Protein interactions for RNA: ENST00000412828.1

AC003087.1-201, humanhuman

TSL 3 BASIC

Gene AC003087.1, Length 499 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC003087.1-201ENST00000412828 CAPRIN1Q14444 709 aaKnown RBP8.49□□□□□ -1.05
AC003087.1-201ENST00000412828 TFDP3Q5H9I0 405 aa8.49□□□□□ -1.05
AC003087.1-201ENST00000412828 TLDC1Q6P9B6 456 aa8.49□□□□□ -1.05
AC003087.1-201ENST00000412828 CRTC3Q6UUV7 619 aa8.49□□□□□ -1.05
AC003087.1-201ENST00000412828 SHISA6Q6ZSJ9 500 aa8.49□□□□□ -1.05
AC003087.1-201ENST00000412828 CDHR3Q6ZTQ4 885 aa8.49□□□□□ -1.05
AC003087.1-201ENST00000412828 NDUFAF7Q7L592 441 aa8.49□□□□□ -1.05
AC003087.1-201ENST00000412828 WDR53Q7Z5U6 358 aaPredicted RBP8.49□□□□□ -1.05
AC003087.1-201ENST00000412828 FAM131BQ86XD5 332 aa8.49□□□□□ -1.05
AC003087.1-201ENST00000412828 SLC13A5Q86YT5 568 aaPredicted RBP8.49□□□□□ -1.05
AC003087.1-201ENST00000412828 LGI4Q8N135 537 aa8.49□□□□□ -1.05
AC003087.1-201ENST00000412828 LIX1Q8N485 282 aa8.49□□□□□ -1.05
AC003087.1-201ENST00000412828 MDS2Q8NDY4 140 aa8.49□□□□□ -1.05
AC003087.1-201ENST00000412828 MCUQ8NE86 351 aa8.49□□□□□ -1.05
AC003087.1-201ENST00000412828 ZSCAN31Q96LW9 406 aaPredicted RBP8.49□□□□□ -1.05
AC003087.1-201ENST00000412828 MCCC1Q96RQ3 725 aaPredicted RBP8.49□□□□□ -1.05
AC003087.1-201ENST00000412828 YIPF4Q9BSR8 244 aa8.49□□□□□ -1.05
AC003087.1-201ENST00000412828 BEX2Q9BXY8 128 aa8.49□□□□□ -1.05
AC003087.1-201ENST00000412828 SOX17Q9H6I2 414 aaPredicted RBP8.49□□□□□ -1.05
AC003087.1-201ENST00000412828 PLSCR2Q9NRY7 297 aa8.49□□□□□ -1.05
AC003087.1-201ENST00000412828 TRIM10Q9UDY6 481 aa8.49□□□□□ -1.05
AC003087.1-201ENST00000412828 CCDC88CQ9P219 2028 aa8.48□□□□□ -1.05
AC003087.1-201ENST00000412828 A0A1W2PPR1 153 aa8.48□□□□□ -1.05
AC003087.1-201ENST00000412828 FAM72CH0Y354 149 aa8.48□□□□□ -1.05
AC003087.1-201ENST00000412828 J3KR12 359 aa8.48□□□□□ -1.05
AC003087.1-201ENST00000412828 PALMO75781 387 aa8.48□□□□□ -1.05
AC003087.1-201ENST00000412828 SOX30O94993 753 aa8.48□□□□□ -1.05
AC003087.1-201ENST00000412828 ONECUT2O95948 504 aa8.48□□□□□ -1.05
AC003087.1-201ENST00000412828 STATHP02808 62 aa8.48□□□□□ -1.05
AC003087.1-201ENST00000412828 PRKCSHP14314 528 aaPredicted RBP8.48□□□□□ -1.05
AC003087.1-201ENST00000412828 POLR2CP19387 275 aaPredicted RBP8.48□□□□□ -1.05
AC003087.1-201ENST00000412828 SNX16P57768 344 aa8.48□□□□□ -1.05
AC003087.1-201ENST00000412828 GALNT3Q14435 633 aa8.48□□□□□ -1.05
AC003087.1-201ENST00000412828 PTPRRQ15256 657 aa8.48□□□□□ -1.05
AC003087.1-201ENST00000412828 RPE65Q16518 533 aa8.48□□□□□ -1.05
AC003087.1-201ENST00000412828 FAM174BQ3ZCQ3 159 aa8.48□□□□□ -1.05
AC003087.1-201ENST00000412828 GPRC6AQ5T6X5 926 aa8.48□□□□□ -1.05
AC003087.1-201ENST00000412828 FAM72AQ5TYM5 149 aa8.48□□□□□ -1.05
AC003087.1-201ENST00000412828 LRRC66Q68CR7 880 aa8.48□□□□□ -1.05
AC003087.1-201ENST00000412828 FAM72DQ6L9T8 149 aa8.48□□□□□ -1.05
AC003087.1-201ENST00000412828 CNSTQ6PJW8 725 aa8.48□□□□□ -1.05
AC003087.1-201ENST00000412828 NEK10Q6ZWH5 1172 aa8.48□□□□□ -1.05
AC003087.1-201ENST00000412828 BRAPQ7Z569 592 aa8.48□□□□□ -1.05
AC003087.1-201ENST00000412828 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.48□□□□□ -1.05
AC003087.1-201ENST00000412828 LRRTM4Q86VH4 590 aa8.48□□□□□ -1.05
AC003087.1-201ENST00000412828 FAM72BQ86X60 149 aa8.48□□□□□ -1.05
AC003087.1-201ENST00000412828 RAVER1Q8IY67 606 aaKnown RBP8.48□□□□□ -1.05
AC003087.1-201ENST00000412828 PPM1KQ8N3J5 372 aa8.48□□□□□ -1.05
AC003087.1-201ENST00000412828 RTL3Q8N8U3 475 aaKnown RBP8.48□□□□□ -1.05
AC003087.1-201ENST00000412828 MAPK1IP1LQ8NDC0 245 aa8.48□□□□□ -1.05
AC003087.1-201ENST00000412828 ZNF606Q8WXB4 792 aa8.48□□□□□ -1.05
AC003087.1-201ENST00000412828 CCL19Q99731 98 aa8.48□□□□□ -1.05
AC003087.1-201ENST00000412828 MESP1Q9BRJ9 268 aa8.48□□□□□ -1.05
AC003087.1-201ENST00000412828 TTYH2Q9BSA4 534 aa8.48□□□□□ -1.05
AC003087.1-201ENST00000412828 CINPQ9BW66 212 aaPredicted RBP8.48□□□□□ -1.05
AC003087.1-201ENST00000412828 HES7Q9BYE0 225 aa8.48□□□□□ -1.05
AC003087.1-201ENST00000412828 OR2AG1Q9H205 316 aa8.48□□□□□ -1.05
AC003087.1-201ENST00000412828 BLZF1Q9H2G9 400 aa8.48□□□□□ -1.05
AC003087.1-201ENST00000412828 TRIM39Q9HCM9 518 aa8.48□□□□□ -1.05
AC003087.1-201ENST00000412828 LPAR3Q9UBY5 353 aa8.48□□□□□ -1.05
AC003087.1-201ENST00000412828 PPIL1Q9Y3C6 166 aa8.48□□□□□ -1.05
AC003087.1-201ENST00000412828 CLIC4Q9Y696 253 aa8.48□□□□□ -1.05
AC003087.1-201ENST00000412828 A0A0G2JNJ9 132 aa8.47□□□□□ -1.05
AC003087.1-201ENST00000412828 FADS2P1A8MWK0 482 aa8.47□□□□□ -1.05
AC003087.1-201ENST00000412828 PRAMEF11O60813 436 aa8.47□□□□□ -1.05
AC003087.1-201ENST00000412828 LETM1O95202 739 aaPredicted RBP8.47□□□□□ -1.05
AC003087.1-201ENST00000412828 CYP1A1P04798 512 aaPredicted RBP8.47□□□□□ -1.05
AC003087.1-201ENST00000412828 COX6A1P12074 109 aa8.47□□□□□ -1.05
AC003087.1-201ENST00000412828 VCLP18206 1134 aa8.47□□□□□ -1.05
AC003087.1-201ENST00000412828 FPR1P21462 350 aa8.47□□□□□ -1.05
AC003087.1-201ENST00000412828 ALAS2P22557 587 aa8.47□□□□□ -1.05
AC003087.1-201ENST00000412828 CASP1P29466 404 aa8.47□□□□□ -1.05
AC003087.1-201ENST00000412828 PRDX3P30048 256 aaKnown RBP8.47□□□□□ -1.05
AC003087.1-201ENST00000412828 SOX5P35711 763 aa8.47□□□□□ -1.05
AC003087.1-201ENST00000412828 PTH2RP49190 550 aa8.47□□□□□ -1.05
AC003087.1-201ENST00000412828 EMC4Q5J8M3 183 aa8.47□□□□□ -1.05
AC003087.1-201ENST00000412828 RNFT1Q5M7Z0 435 aa8.47□□□□□ -1.05
AC003087.1-201ENST00000412828 BNIPLQ7Z465 357 aa8.47□□□□□ -1.05
AC003087.1-201ENST00000412828 GALNTL5Q7Z4T8 443 aa8.47□□□□□ -1.05
AC003087.1-201ENST00000412828 ZDHHC17Q8IUH5 632 aa8.47□□□□□ -1.05
AC003087.1-201ENST00000412828 WDTC1Q8N5D0 677 aa8.47□□□□□ -1.05
AC003087.1-201ENST00000412828 ZNF655Q8N720 491 aaPredicted RBP8.47□□□□□ -1.05
AC003087.1-201ENST00000412828 C1orf131Q8NDD1 294 aaKnown RBP8.47□□□□□ -1.05
AC003087.1-201ENST00000412828 DENND1AQ8TEH3 1009 aa8.47□□□□□ -1.05
AC003087.1-201ENST00000412828 KAT5Q92993 513 aa8.47□□□□□ -1.05
AC003087.1-201ENST00000412828 RNASE6Q93091 150 aaKnown RBP8.47□□□□□ -1.05
AC003087.1-201ENST00000412828 DHX58Q96C10 678 aa8.47□□□□□ -1.05
AC003087.1-201ENST00000412828 C8orf44Q96CB5 159 aa8.47□□□□□ -1.05
AC003087.1-201ENST00000412828 OLFM1Q99784 485 aa8.47□□□□□ -1.05
AC003087.1-201ENST00000412828 CRB3Q9BUF7 120 aa8.47□□□□□ -1.05
AC003087.1-201ENST00000412828 PITPNM3Q9BZ71 974 aa8.47□□□□□ -1.05
AC003087.1-201ENST00000412828 METTL14Q9HCE5 456 aaKnown RBP8.47□□□□□ -1.05
AC003087.1-201ENST00000412828 B4GALT7Q9UBV7 327 aa8.47□□□□□ -1.05
AC003087.1-201ENST00000412828 Q9UFV3 132 aa8.47□□□□□ -1.05
AC003087.1-201ENST00000412828 FOXD3Q9UJU5 478 aaPredicted RBP8.47□□□□□ -1.05
AC003087.1-201ENST00000412828 MGAM2Q2M2H8 2515 aa8.47□□□□□ -1.05
AC003087.1-201ENST00000412828 A0A1W2PQ72 361 aa8.46□□□□□ -1.06
AC003087.1-201ENST00000412828 VSTM2BA6NLU5 285 aa8.46□□□□□ -1.06
AC003087.1-201ENST00000412828 RNF223E7ERA6 249 aa8.46□□□□□ -1.06
AC003087.1-201ENST00000412828 ACTN4O43707 911 aaKnown RBP8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms