RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 BOP1Q14137 746 aaKnown RBP8.84□□□□□ -0.99
SNORD88A-201ENST00000408314 DBN1Q16643 649 aa8.84□□□□□ -0.99
SNORD88A-201ENST00000408314 LINC00303Q3SY05 128 aa8.84□□□□□ -0.99
SNORD88A-201ENST00000408314 FASTKD1Q53R41 847 aaKnown RBP8.84□□□□□ -0.99
SNORD88A-201ENST00000408314 DUS1LQ6P1R4 473 aaKnown RBP8.84□□□□□ -0.99
SNORD88A-201ENST00000408314 LRRC6Q86X45 466 aa8.84□□□□□ -0.99
SNORD88A-201ENST00000408314 TMEM126BQ8IUX1 230 aa8.84□□□□□ -0.99
SNORD88A-201ENST00000408314 D2HGDHQ8N465 521 aa8.84□□□□□ -0.99
SNORD88A-201ENST00000408314 GALNT6Q8NCL4 622 aa8.84□□□□□ -0.99
SNORD88A-201ENST00000408314 SPDYE1Q8NFV5 336 aaPredicted RBP8.84□□□□□ -0.99
SNORD88A-201ENST00000408314 OR6P1Q8NGX9 317 aa8.84□□□□□ -0.99
SNORD88A-201ENST00000408314 GSDMBQ8TAX9 411 aa8.84□□□□□ -0.99
SNORD88A-201ENST00000408314 APOBEC4Q8WW27 367 aaKnown RBP8.84□□□□□ -0.99
SNORD88A-201ENST00000408314 CPT1BQ92523 772 aa8.84□□□□□ -0.99
SNORD88A-201ENST00000408314 ELMO1Q92556 727 aa8.84□□□□□ -0.99
SNORD88A-201ENST00000408314 TFGQ92734 400 aaPredicted RBP8.84□□□□□ -0.99
SNORD88A-201ENST00000408314 SGSM3Q96HU1 749 aa8.84□□□□□ -0.99
SNORD88A-201ENST00000408314 NAP1L3Q99457 506 aaPredicted RBP8.84□□□□□ -0.99
SNORD88A-201ENST00000408314 MAP3K3Q99759 626 aa8.84□□□□□ -0.99
SNORD88A-201ENST00000408314 GPR87Q9BY21 358 aa8.84□□□□□ -0.99
SNORD88A-201ENST00000408314 IL22Q9GZX6 179 aa8.84□□□□□ -0.99
SNORD88A-201ENST00000408314 SLC25A18Q9H1K4 315 aa8.84□□□□□ -0.99
SNORD88A-201ENST00000408314 OR52A5Q9H2C5 316 aa8.84□□□□□ -0.99
SNORD88A-201ENST00000408314 PIEZO2Q9H5I5 2752 aa8.84□□□□□ -0.99
SNORD88A-201ENST00000408314 CASS4Q9NQ75 786 aa8.84□□□□□ -0.99
SNORD88A-201ENST00000408314 STARD5Q9NSY2 213 aa8.84□□□□□ -0.99
SNORD88A-201ENST00000408314 BFARQ9NZS9 450 aa8.84□□□□□ -0.99
SNORD88A-201ENST00000408314 CROTQ9UKG9 612 aa8.84□□□□□ -0.99
SNORD88A-201ENST00000408314 POLHQ9Y253 713 aa8.84□□□□□ -0.99
SNORD88A-201ENST00000408314 TCAF1Q9Y4C2 921 aa8.84□□□□□ -0.99
SNORD88A-201ENST00000408314 CFAP46Q8IYW2 2715 aa8.84□□□□□ -0.99
SNORD88A-201ENST00000408314 HELZ2Q9BYK8 2649 aaKnown RBP8.84□□□□□ -1
SNORD88A-201ENST00000408314 GCN1Q92616 2671 aaKnown RBP8.83□□□□□ -1
SNORD88A-201ENST00000408314 IGHV5-51A0A0C4DH38 117 aa8.83□□□□□ -1
SNORD88A-201ENST00000408314 SLC28A2O43868 658 aa8.83□□□□□ -1
SNORD88A-201ENST00000408314 SCRG1O75711 98 aa8.83□□□□□ -1
SNORD88A-201ENST00000408314 FGGP02679 453 aa8.83□□□□□ -1
SNORD88A-201ENST00000408314 APOA4P06727 396 aa8.83□□□□□ -1
SNORD88A-201ENST00000408314 KLK3P07288 261 aaPredicted RBP8.83□□□□□ -1
SNORD88A-201ENST00000408314 FAM87AP0C7U9 286 aa8.83□□□□□ -1
SNORD88A-201ENST00000408314 EBLN1P0CF75 366 aa8.83□□□□□ -1
SNORD88A-201ENST00000408314 WT1P19544 449 aaPredicted RBP8.83□□□□□ -1
SNORD88A-201ENST00000408314 FOXN2P32314 431 aa8.83□□□□□ -1
SNORD88A-201ENST00000408314 CA5AP35218 305 aa8.83□□□□□ -1
SNORD88A-201ENST00000408314 NPY2RP49146 381 aa8.83□□□□□ -1
SNORD88A-201ENST00000408314 POLE2P56282 527 aa8.83□□□□□ -1
SNORD88A-201ENST00000408314 BASP1P80723 227 aaKnown RBP8.83□□□□□ -1
SNORD88A-201ENST00000408314 ACVR1Q04771 509 aa8.83□□□□□ -1
SNORD88A-201ENST00000408314 NFATC3Q12968 1075 aa8.83□□□□□ -1
SNORD88A-201ENST00000408314 KCNAB2Q13303 367 aa8.83□□□□□ -1
SNORD88A-201ENST00000408314 SNX1Q13596 522 aa8.83□□□□□ -1
SNORD88A-201ENST00000408314 DNASE1L3Q13609 305 aa8.83□□□□□ -1
SNORD88A-201ENST00000408314 DNAJC21Q5F1R6 531 aaKnown RBP8.83□□□□□ -1
SNORD88A-201ENST00000408314 PCID2Q5JVF3 399 aa8.83□□□□□ -1
SNORD88A-201ENST00000408314 RNF187Q5TA31 235 aaPredicted RBP8.83□□□□□ -1
SNORD88A-201ENST00000408314 TTC23LQ6PF05 361 aa8.83□□□□□ -1
SNORD88A-201ENST00000408314 ATG14Q6ZNE5 492 aa8.83□□□□□ -1
SNORD88A-201ENST00000408314 TIPARPQ7Z3E1 657 aaKnown RBP8.83□□□□□ -1
SNORD88A-201ENST00000408314 AMIGO1Q86WK6 493 aa8.83□□□□□ -1
SNORD88A-201ENST00000408314 LRRC8AQ8IWT6 810 aa8.83□□□□□ -1
SNORD88A-201ENST00000408314 TBC1D21Q8IYX1 336 aa8.83□□□□□ -1
SNORD88A-201ENST00000408314 RAB42Q8N4Z0 105 aa8.83□□□□□ -1
SNORD88A-201ENST00000408314 TAB3Q8N5C8 712 aaPredicted RBP8.83□□□□□ -1
SNORD88A-201ENST00000408314 CLDN19Q8N6F1 224 aa8.83□□□□□ -1
SNORD88A-201ENST00000408314 OR4E2Q8NGC2 313 aa8.83□□□□□ -1
SNORD88A-201ENST00000408314 OR52E1Q8NGJ3 308 aa8.83□□□□□ -1
SNORD88A-201ENST00000408314 OR4L1Q8NH43 312 aa8.83□□□□□ -1
SNORD88A-201ENST00000408314 C1orf54Q8WWF1 131 aa8.83□□□□□ -1
SNORD88A-201ENST00000408314 ASZ1Q8WWH4 475 aa8.83□□□□□ -1
SNORD88A-201ENST00000408314 N4BP2L2Q92802 583 aaPredicted RBP8.83□□□□□ -1
SNORD88A-201ENST00000408314 ELMO2Q96JJ3 720 aa8.83□□□□□ -1
SNORD88A-201ENST00000408314 LRFN5Q96NI6 719 aa8.83□□□□□ -1
SNORD88A-201ENST00000408314 PANX3Q96QZ0 392 aa8.83□□□□□ -1
SNORD88A-201ENST00000408314 C17orf62Q9BQA9 187 aa8.83□□□□□ -1
SNORD88A-201ENST00000408314 HGH1Q9BTY7 390 aa8.83□□□□□ -1
SNORD88A-201ENST00000408314 RAB11FIP5Q9BXF6 653 aa8.83□□□□□ -1
SNORD88A-201ENST00000408314 SEMA4CQ9C0C4 833 aa8.83□□□□□ -1
SNORD88A-201ENST00000408314 SLC7A5P2Q9GIP4 190 aa8.83□□□□□ -1
SNORD88A-201ENST00000408314 LHX9Q9NQ69 397 aa8.83□□□□□ -1
SNORD88A-201ENST00000408314 KCND1Q9NSA2 647 aa8.83□□□□□ -1
SNORD88A-201ENST00000408314 CATSPERZQ9NTU4 200 aa8.83□□□□□ -1
SNORD88A-201ENST00000408314 PIH1D1Q9NWS0 290 aaKnown RBP8.83□□□□□ -1
SNORD88A-201ENST00000408314 OR6C2Q9NZP2 312 aa8.83□□□□□ -1
SNORD88A-201ENST00000408314 ASF1AQ9Y294 204 aa8.83□□□□□ -1
SNORD88A-201ENST00000408314 PCDHGA6Q9Y5G7 932 aa8.83□□□□□ -1
SNORD88A-201ENST00000408314 SMG1Q96Q15 3661 aaKnown RBP8.82□□□□□ -1
SNORD88A-201ENST00000408314 TLN1Q9Y490 2541 aaKnown RBP8.82□□□□□ -1
SNORD88A-201ENST00000408314 A0A0U1RQJ8 604 aa8.82□□□□□ -1
SNORD88A-201ENST00000408314 CCDC162PA2VCL2 907 aa8.82□□□□□ -1
SNORD88A-201ENST00000408314 MKRN2OSH3BPM6 223 aa8.82□□□□□ -1
SNORD88A-201ENST00000408314 CEP104O60308 925 aa8.82□□□□□ -1
SNORD88A-201ENST00000408314 GOT2P00505 430 aaKnown RBP8.82□□□□□ -1
SNORD88A-201ENST00000408314 CD63P08962 238 aa8.82□□□□□ -1
SNORD88A-201ENST00000408314 PRKAR1AP10644 381 aa8.82□□□□□ -1
SNORD88A-201ENST00000408314 FOLR1P15328 257 aa8.82□□□□□ -1
SNORD88A-201ENST00000408314 ZNF28P17035 718 aa8.82□□□□□ -1
SNORD88A-201ENST00000408314 PAMP19021 973 aa8.82□□□□□ -1
SNORD88A-201ENST00000408314 POLR2CP19387 275 aaPredicted RBP8.82□□□□□ -1
SNORD88A-201ENST00000408314 TPSB2P20231 275 aa8.82□□□□□ -1
SNORD88A-201ENST00000408314 CYP2A7P20853 494 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms