RNA–Protein interactions for RNA: ENST00000404040.5

HDAC11-204, Transcript of histone deacetylase 11, humanhuman

TSL 3 BASIC

Gene HDAC11, Length 967 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-204ENST00000404040 RAB17Q9H0T7 212 aa17.53■□□□□ 0.4
HDAC11-204ENST00000404040 TRIM39Q9HCM9 518 aa17.53■□□□□ 0.4
HDAC11-204ENST00000404040 LHX9Q9NQ69 397 aa17.53■□□□□ 0.4
HDAC11-204ENST00000404040 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.53■□□□□ 0.4
HDAC11-204ENST00000404040 LRBAP50851 2863 aa17.52■□□□□ 0.4
HDAC11-204ENST00000404040 PDZK1P1A8MUH7 402 aa17.52■□□□□ 0.4
HDAC11-204ENST00000404040 TTI1O43156 1089 aa17.52■□□□□ 0.4
HDAC11-204ENST00000404040 SLC25A14O95258 325 aaPredicted RBP17.52■□□□□ 0.4
HDAC11-204ENST00000404040 BRAFP15056 766 aa17.52■□□□□ 0.4
HDAC11-204ENST00000404040 NELFEP18615 380 aaKnown RBP17.52■□□□□ 0.4
HDAC11-204ENST00000404040 HMGCLP35914 325 aa17.52■□□□□ 0.4
HDAC11-204ENST00000404040 CHRNA4P43681 627 aa17.52■□□□□ 0.4
HDAC11-204ENST00000404040 PGDP52209 483 aa17.52■□□□□ 0.4
HDAC11-204ENST00000404040 GPR18Q14330 331 aa17.52■□□□□ 0.4
HDAC11-204ENST00000404040 KCNJ11Q14654 390 aa17.52■□□□□ 0.4
HDAC11-204ENST00000404040 TAF1AQ15573 450 aaPredicted RBP17.52■□□□□ 0.4
HDAC11-204ENST00000404040 CACHD1Q5VU97 1274 aa17.52■□□□□ 0.4
HDAC11-204ENST00000404040 ALS2CLQ60I27 953 aa17.52■□□□□ 0.4
HDAC11-204ENST00000404040 FAM92BQ6ZTR7 304 aa17.52■□□□□ 0.4
HDAC11-204ENST00000404040 TMC3Q7Z5M5 1100 aa17.52■□□□□ 0.4
HDAC11-204ENST00000404040 HOOK3Q86VS8 718 aa17.52■□□□□ 0.4
HDAC11-204ENST00000404040 PPIL6Q8IXY8 311 aa17.52■□□□□ 0.4
HDAC11-204ENST00000404040 SEC14L1Q92503 715 aa17.52■□□□□ 0.4
HDAC11-204ENST00000404040 ZDHHC12Q96GR4 267 aa17.52■□□□□ 0.4
HDAC11-204ENST00000404040 APOL2Q9BQE5 337 aa17.52■□□□□ 0.4
HDAC11-204ENST00000404040 TIMM29Q9BSF4 260 aa17.52■□□□□ 0.4
HDAC11-204ENST00000404040 ZSCAN5AQ9BUG6 496 aa17.52■□□□□ 0.4
HDAC11-204ENST00000404040 SLC40A1Q9NP59 571 aa17.52■□□□□ 0.4
HDAC11-204ENST00000404040 NFKBIL1Q9UBC1 381 aaPredicted RBP17.52■□□□□ 0.4
HDAC11-204ENST00000404040 EPHA6Q9UF33 1036 aa17.52■□□□□ 0.4
HDAC11-204ENST00000404040 UTP11Q9Y3A2 253 aaKnown RBP17.52■□□□□ 0.4
HDAC11-204ENST00000404040 PKP3Q9Y446 797 aa17.52■□□□□ 0.4
HDAC11-204ENST00000404040 CELSR2Q9HCU4 2923 aa17.52■□□□□ 0.4
HDAC11-204ENST00000404040 FER1L5A0AVI2 2057 aa17.51■□□□□ 0.39
HDAC11-204ENST00000404040 DNALI1O14645 258 aaPredicted RBP17.51■□□□□ 0.39
HDAC11-204ENST00000404040 KMOO15229 486 aa17.51■□□□□ 0.39
HDAC11-204ENST00000404040 SORBS2O94875 1100 aaKnown RBP17.51■□□□□ 0.39
HDAC11-204ENST00000404040 RNF224P0DH78 156 aa17.51■□□□□ 0.39
HDAC11-204ENST00000404040 MLNP12872 115 aa17.51■□□□□ 0.39
HDAC11-204ENST00000404040 ZNF7P17097 686 aaPredicted RBP17.51■□□□□ 0.39
HDAC11-204ENST00000404040 TUBB3Q13509 450 aa17.51■□□□□ 0.39
HDAC11-204ENST00000404040 UGT8Q16880 541 aa17.51■□□□□ 0.39
HDAC11-204ENST00000404040 NADK2Q4G0N4 442 aa17.51■□□□□ 0.39
HDAC11-204ENST00000404040 CPZQ66K79 652 aa17.51■□□□□ 0.39
HDAC11-204ENST00000404040 PDPK2PQ6A1A2 396 aa17.51■□□□□ 0.39
HDAC11-204ENST00000404040 DENND5AQ6IQ26 1287 aa17.51■□□□□ 0.39
HDAC11-204ENST00000404040 IRGCQ6NXR0 463 aa17.51■□□□□ 0.39
HDAC11-204ENST00000404040 C8orf74Q6P047 294 aa17.51■□□□□ 0.39
HDAC11-204ENST00000404040 ABRAXAS1Q6UWZ7 409 aa17.51■□□□□ 0.39
HDAC11-204ENST00000404040 LRRTM4Q86VH4 590 aa17.51■□□□□ 0.39
HDAC11-204ENST00000404040 ZNF547Q8IVP9 402 aa17.51■□□□□ 0.39
HDAC11-204ENST00000404040 RBM12BQ8IXT5 1001 aaKnown RBP17.51■□□□□ 0.39
HDAC11-204ENST00000404040 GPR26Q8NDV2 337 aa17.51■□□□□ 0.39
HDAC11-204ENST00000404040 MCUQ8NE86 351 aa17.51■□□□□ 0.39
HDAC11-204ENST00000404040 GLYATL1Q969I3 302 aa17.51■□□□□ 0.39
HDAC11-204ENST00000404040 SNF8Q96H20 258 aa17.51■□□□□ 0.39
HDAC11-204ENST00000404040 RUFY1Q96T51 708 aa17.51■□□□□ 0.39
HDAC11-204ENST00000404040 RAB33BQ9H082 229 aa17.51■□□□□ 0.39
HDAC11-204ENST00000404040 XAB2Q9HCS7 855 aaKnown RBP17.51■□□□□ 0.39
HDAC11-204ENST00000404040 CASS4Q9NQ75 786 aa17.51■□□□□ 0.39
HDAC11-204ENST00000404040 SHOC2Q9UQ13 582 aa17.51■□□□□ 0.39
HDAC11-204ENST00000404040 DNAJC16Q9Y2G8 782 aa17.51■□□□□ 0.39
HDAC11-204ENST00000404040 PCDHGA9Q9Y5G4 932 aaKnown RBP17.51■□□□□ 0.39
HDAC11-204ENST00000404040 PIKFYVEQ9Y2I7 2098 aa17.51■□□□□ 0.39
HDAC11-204ENST00000404040 OR52A4PA6NMU1 304 aa17.5■□□□□ 0.39
HDAC11-204ENST00000404040 EFCAB8A8MWE9 144 aa17.5■□□□□ 0.39
HDAC11-204ENST00000404040 SEMA7AO75326 666 aa17.5■□□□□ 0.39
HDAC11-204ENST00000404040 LPOP22079 712 aaPredicted RBP17.5■□□□□ 0.39
HDAC11-204ENST00000404040 NPY2RP49146 381 aa17.5■□□□□ 0.39
HDAC11-204ENST00000404040 PPP1CAP62136 330 aa17.5■□□□□ 0.39
HDAC11-204ENST00000404040 GLE1Q53GS7 698 aaKnown RBP17.5■□□□□ 0.39
HDAC11-204ENST00000404040 AGAP9Q5VTM2 703 aa17.5■□□□□ 0.39
HDAC11-204ENST00000404040 PWWP2BQ6NUJ5 590 aa17.5■□□□□ 0.39
HDAC11-204ENST00000404040 LRRC8BQ6P9F7 803 aa17.5■□□□□ 0.39
HDAC11-204ENST00000404040 WASH2PQ6VEQ5 465 aa17.5■□□□□ 0.39
HDAC11-204ENST00000404040 NLRP9Q7RTR0 991 aa17.5■□□□□ 0.39
HDAC11-204ENST00000404040 MMGT1Q8N4V1 131 aa17.5■□□□□ 0.39
HDAC11-204ENST00000404040 TRAM1L1Q8N609 369 aa17.5■□□□□ 0.39
HDAC11-204ENST00000404040 OR52K1Q8NGK4 314 aa17.5■□□□□ 0.39
HDAC11-204ENST00000404040 THAP4Q8WY91 577 aa17.5■□□□□ 0.39
HDAC11-204ENST00000404040 CPT1BQ92523 772 aa17.5■□□□□ 0.39
HDAC11-204ENST00000404040 SLC41A2Q96JW4 573 aa17.5■□□□□ 0.39
HDAC11-204ENST00000404040 SLC25A23Q9BV35 468 aa17.5■□□□□ 0.39
HDAC11-204ENST00000404040 GPR87Q9BY21 358 aa17.5■□□□□ 0.39
HDAC11-204ENST00000404040 PDE7BQ9NP56 450 aa17.5■□□□□ 0.39
HDAC11-204ENST00000404040 MLXIPLQ9NP71 852 aa17.5■□□□□ 0.39
HDAC11-204ENST00000404040 WASH6PQ9NQA3 447 aa17.5■□□□□ 0.39
HDAC11-204ENST00000404040 CUEDC1Q9NWM3 386 aaPredicted RBP17.5■□□□□ 0.39
HDAC11-204ENST00000404040 BFARQ9NZS9 450 aa17.5■□□□□ 0.39
HDAC11-204ENST00000404040 SEMA5BQ9P283 1151 aa17.5■□□□□ 0.39
HDAC11-204ENST00000404040 RARRES3Q9UL19 164 aa17.5■□□□□ 0.39
HDAC11-204ENST00000404040 MAP4K5Q9Y4K4 846 aa17.5■□□□□ 0.39
HDAC11-204ENST00000404040 SPO11Q9Y5K1 396 aa17.5■□□□□ 0.39
HDAC11-204ENST00000404040 CCDC88CQ9P219 2028 aa17.5■□□□□ 0.39
HDAC11-204ENST00000404040 DIDO1Q9BTC0 2240 aaKnown RBP17.49■□□□□ 0.39
HDAC11-204ENST00000404040 HEATR9A2RTY3 570 aa17.49■□□□□ 0.39
HDAC11-204ENST00000404040 STX7O15400 261 aaKnown RBP17.49■□□□□ 0.39
HDAC11-204ENST00000404040 RAD51CO43502 376 aa17.49■□□□□ 0.39
HDAC11-204ENST00000404040 PIRTP0C851 137 aa17.49■□□□□ 0.39
HDAC11-204ENST00000404040 RPL10P27635 214 aaKnown RBP17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms