RNA–Protein interactions for RNA: ENST00000399299.5

SMIM11A-203, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best) BASIC

Gene SMIM11A, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-203ENST00000399299 SPTA1P02549 2419 aa14.46□□□□□ -0.09
SMIM11A-203ENST00000399299 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.46□□□□□ -0.09
SMIM11A-203ENST00000399299 LOC101059948A0A1B0GTJ6 334 aa14.46□□□□□ -0.09
SMIM11A-203ENST00000399299 SLC5A10A0PJK1 596 aa14.46□□□□□ -0.09
SMIM11A-203ENST00000399299 ZNF891A8MT65 544 aaPredicted RBP14.46□□□□□ -0.09
SMIM11A-203ENST00000399299 SPAG6O75602 509 aa14.46□□□□□ -0.09
SMIM11A-203ENST00000399299 ZBTB11O95625 1053 aaPredicted RBP14.46□□□□□ -0.09
SMIM11A-203ENST00000399299 ZNF28P17035 718 aa14.46□□□□□ -0.09
SMIM11A-203ENST00000399299 PREPP48147 710 aa14.46□□□□□ -0.09
SMIM11A-203ENST00000399299 ARL4DP49703 201 aa14.46□□□□□ -0.09
SMIM11A-203ENST00000399299 HSD11B2P80365 405 aa14.46□□□□□ -0.09
SMIM11A-203ENST00000399299 TUBB3Q13509 450 aa14.46□□□□□ -0.09
SMIM11A-203ENST00000399299 LY6DQ14210 128 aa14.46□□□□□ -0.09
SMIM11A-203ENST00000399299 LINC00303Q3SY05 128 aa14.46□□□□□ -0.09
SMIM11A-203ENST00000399299 CRTC2Q53ET0 693 aaPredicted RBP14.46□□□□□ -0.09
SMIM11A-203ENST00000399299 ARMC3Q5W041 872 aa14.46□□□□□ -0.09
SMIM11A-203ENST00000399299 RASGRP3Q8IV61 690 aa14.46□□□□□ -0.09
SMIM11A-203ENST00000399299 OR4E2Q8NGC2 313 aa14.46□□□□□ -0.09
SMIM11A-203ENST00000399299 OR52E1Q8NGJ3 308 aa14.46□□□□□ -0.09
SMIM11A-203ENST00000399299 ELMO1Q92556 727 aa14.46□□□□□ -0.09
SMIM11A-203ENST00000399299 SRMSQ9H3Y6 488 aa14.46□□□□□ -0.09
SMIM11A-203ENST00000399299 MRM3Q9HC36 420 aaKnown RBP14.46□□□□□ -0.09
SMIM11A-203ENST00000399299 CHRAC1Q9NRG0 131 aa14.46□□□□□ -0.09
SMIM11A-203ENST00000399299 C1GALT1Q9NS00 363 aa14.46□□□□□ -0.09
SMIM11A-203ENST00000399299 TREX1Q9NSU2 369 aa14.46□□□□□ -0.09
SMIM11A-203ENST00000399299 RARRES3Q9UL19 164 aa14.46□□□□□ -0.09
SMIM11A-203ENST00000399299 BTRCQ9Y297 605 aa14.46□□□□□ -0.09
SMIM11A-203ENST00000399299 OR1I1O60431 355 aa14.45□□□□□ -0.1
SMIM11A-203ENST00000399299 KIAA0754O94854 1291 aa14.45□□□□□ -0.1
SMIM11A-203ENST00000399299 MT-ND3P03897 115 aa14.45□□□□□ -0.1
SMIM11A-203ENST00000399299 FOLR1P15328 257 aa14.45□□□□□ -0.1
SMIM11A-203ENST00000399299 POLR2CP19387 275 aaPredicted RBP14.45□□□□□ -0.1
SMIM11A-203ENST00000399299 ACADLP28330 430 aa14.45□□□□□ -0.1
SMIM11A-203ENST00000399299 MAGEA6P43360 314 aa14.45□□□□□ -0.1
SMIM11A-203ENST00000399299 TTPAP49638 278 aa14.45□□□□□ -0.1
SMIM11A-203ENST00000399299 KPNA2P52292 529 aaKnown RBP14.45□□□□□ -0.1
SMIM11A-203ENST00000399299 SESN2P58004 480 aaPredicted RBP14.45□□□□□ -0.1
SMIM11A-203ENST00000399299 SEMA3AQ14563 771 aa14.45□□□□□ -0.1
SMIM11A-203ENST00000399299 TBR1Q16650 682 aa14.45□□□□□ -0.1
SMIM11A-203ENST00000399299 LRRC8BQ6P9F7 803 aa14.45□□□□□ -0.1
SMIM11A-203ENST00000399299 C6orf15Q6UXA7 325 aaPredicted RBP14.45□□□□□ -0.1
SMIM11A-203ENST00000399299 MPP5Q8N3R9 675 aa14.45□□□□□ -0.1
SMIM11A-203ENST00000399299 OR8K5Q8NH50 307 aa14.45□□□□□ -0.1
SMIM11A-203ENST00000399299 EXTL1Q92935 676 aa14.45□□□□□ -0.1
SMIM11A-203ENST00000399299 STAMBPL1Q96FJ0 436 aa14.45□□□□□ -0.1
SMIM11A-203ENST00000399299 CATSPER2Q96P56 530 aa14.45□□□□□ -0.1
SMIM11A-203ENST00000399299 NAP1L3Q99457 506 aaPredicted RBP14.45□□□□□ -0.1
SMIM11A-203ENST00000399299 KIFC1Q9BW19 673 aa14.45□□□□□ -0.1
SMIM11A-203ENST00000399299 CARD6Q9BX69 1037 aa14.45□□□□□ -0.1
SMIM11A-203ENST00000399299 TSSK1BQ9BXA7 367 aa14.45□□□□□ -0.1
SMIM11A-203ENST00000399299 SEMA4CQ9C0C4 833 aa14.45□□□□□ -0.1
SMIM11A-203ENST00000399299 FGF21Q9NSA1 209 aa14.45□□□□□ -0.1
SMIM11A-203ENST00000399299 CATSPERZQ9NTU4 200 aa14.45□□□□□ -0.1
SMIM11A-203ENST00000399299 ANAPC5Q9UJX4 755 aa14.45□□□□□ -0.1
SMIM11A-203ENST00000399299 RPS6KL1Q9Y6S9 549 aa14.45□□□□□ -0.1
SMIM11A-203ENST00000399299 PRMT5O14744 637 aaPredicted RBP14.44□□□□□ -0.1
SMIM11A-203ENST00000399299 ZSCAN12O43309 604 aa14.44□□□□□ -0.1
SMIM11A-203ENST00000399299 MSL3P1P0C860 447 aa14.44□□□□□ -0.1
SMIM11A-203ENST00000399299 EBLN1P0CF75 366 aa14.44□□□□□ -0.1
SMIM11A-203ENST00000399299 ARCN1P48444 511 aaKnown RBP14.44□□□□□ -0.1
SMIM11A-203ENST00000399299 TUBB4BP68371 445 aa14.44□□□□□ -0.1
SMIM11A-203ENST00000399299 CYP4F2P78329 520 aa14.44□□□□□ -0.1
SMIM11A-203ENST00000399299 CRADDP78560 199 aa14.44□□□□□ -0.1
SMIM11A-203ENST00000399299 MC1RQ01726 317 aa14.44□□□□□ -0.1
SMIM11A-203ENST00000399299 TUBB2AQ13885 445 aa14.44□□□□□ -0.1
SMIM11A-203ENST00000399299 KCNJ11Q14654 390 aa14.44□□□□□ -0.1
SMIM11A-203ENST00000399299 KCNAB1Q14722 419 aa14.44□□□□□ -0.1
SMIM11A-203ENST00000399299 CYP1B1Q16678 543 aa14.44□□□□□ -0.1
SMIM11A-203ENST00000399299 SYTL3Q4VX76 610 aa14.44□□□□□ -0.1
SMIM11A-203ENST00000399299 TMTC4Q5T4D3 741 aa14.44□□□□□ -0.1
SMIM11A-203ENST00000399299 AMIGO1Q86WK6 493 aa14.44□□□□□ -0.1
SMIM11A-203ENST00000399299 REXO1L1PQ8IX06 675 aa14.44□□□□□ -0.1
SMIM11A-203ENST00000399299 TBC1D21Q8IYX1 336 aa14.44□□□□□ -0.1
SMIM11A-203ENST00000399299 EXD3Q8N9H8 876 aa14.44□□□□□ -0.1
SMIM11A-203ENST00000399299 GALNT6Q8NCL4 622 aa14.44□□□□□ -0.1
SMIM11A-203ENST00000399299 PHC3Q8NDX5 983 aa14.44□□□□□ -0.1
SMIM11A-203ENST00000399299 OR5K2Q8NHB8 316 aa14.44□□□□□ -0.1
SMIM11A-203ENST00000399299 ARHGAP9Q9BRR9 750 aa14.44□□□□□ -0.1
SMIM11A-203ENST00000399299 HGH1Q9BTY7 390 aa14.44□□□□□ -0.1
SMIM11A-203ENST00000399299 TUBB2BQ9BVA1 445 aa14.44□□□□□ -0.1
SMIM11A-203ENST00000399299 PITPNM3Q9BZ71 974 aa14.44□□□□□ -0.1
SMIM11A-203ENST00000399299 SYTL2Q9HCH5 934 aa14.44□□□□□ -0.1
SMIM11A-203ENST00000399299 LATS2Q9NRM7 1088 aa14.44□□□□□ -0.1
SMIM11A-203ENST00000399299 POLG2Q9UHN1 485 aa14.44□□□□□ -0.1
SMIM11A-203ENST00000399299 LNPEPQ9UIQ6 1025 aa14.44□□□□□ -0.1
SMIM11A-203ENST00000399299 ASF1AQ9Y294 204 aa14.44□□□□□ -0.1
SMIM11A-203ENST00000399299 GSAPA4D1B5 854 aa14.43□□□□□ -0.1
SMIM11A-203ENST00000399299 BHMG1C9JSJ3 638 aaPredicted RBP14.43□□□□□ -0.1
SMIM11A-203ENST00000399299 PGRMC1O00264 195 aaKnown RBP14.43□□□□□ -0.1
SMIM11A-203ENST00000399299 BTN3A3O00478 584 aa14.43□□□□□ -0.1
SMIM11A-203ENST00000399299 BTN3A1O00481 513 aa14.43□□□□□ -0.1
SMIM11A-203ENST00000399299 TERTO14746 1132 aaKnown RBP14.43□□□□□ -0.1
SMIM11A-203ENST00000399299 CD3EAPO15446 510 aaKnown RBP14.43□□□□□ -0.1
SMIM11A-203ENST00000399299 TIAF1O95411 115 aa14.43□□□□□ -0.1
SMIM11A-203ENST00000399299 SFTPCP11686 197 aa14.43□□□□□ -0.1
SMIM11A-203ENST00000399299 CDH3P22223 829 aa14.43□□□□□ -0.1
SMIM11A-203ENST00000399299 NMBRP28336 390 aa14.43□□□□□ -0.1
SMIM11A-203ENST00000399299 PRDX3P30048 256 aaKnown RBP14.43□□□□□ -0.1
SMIM11A-203ENST00000399299 SHMT2P34897 504 aa14.43□□□□□ -0.1
SMIM11A-203ENST00000399299 SARNPP82979 210 aaKnown RBP14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms