RNA–Protein interactions for RNA: ENST00000398510.7

CHD9-202, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best) BASIC

Gene CHD9, Length 11,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-202ENST00000398510 SH3GL2Q99962 352 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 HOPXQ9BPY8 73 aaPredicted RBP2.69□□□□□ -1.98
CHD9-202ENST00000398510 FDXACB1Q9BRP7 624 aaPredicted RBP2.69□□□□□ -1.98
CHD9-202ENST00000398510 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP2.69□□□□□ -1.98
CHD9-202ENST00000398510 ELAC1Q9H777 363 aaKnown RBP2.69□□□□□ -1.98
CHD9-202ENST00000398510 SACM1LQ9NTJ5 587 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 FAM105AQ9NUU6 356 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 TMEM45AQ9NWC5 275 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 TAS2R7Q9NYW3 318 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 DKKL1Q9UK85 242 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 STXBP5LQ9Y2K9 1186 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 GLYATL1P3A0A0U1RQE8 302 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 WRBO00258 174 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 CYP26A1O43174 497 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 CLEC3AO75596 197 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 SYNGR4O95473 234 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 CFIP05156 583 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 CDH15P55291 814 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 TUBA4AP68366 448 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 SMAD3P84022 425 aaKnown RBP2.69□□□□□ -1.98
CHD9-202ENST00000398510 PDK4Q16654 411 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 PARP6Q2NL67 630 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 CARD16Q5EG05 197 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 SNAP47Q5SQN1 464 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 STXBP5Q5T5C0 1151 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 LRRN1Q6UXK5 716 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 ZNF589Q86UQ0 364 aaPredicted RBP2.69□□□□□ -1.98
CHD9-202ENST00000398510 AMZ2Q86W34 360 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 DCUN1D3Q8IWE4 304 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 KIAA2013Q8IYS2 634 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 IZUMO1Q8IYV9 350 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 PLA2G15Q8NCC3 412 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 ZNF483Q8TF39 744 aaPredicted RBP2.69□□□□□ -1.98
CHD9-202ENST00000398510 GDPD5Q8WTR4 605 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 FCGR1BQ92637 280 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 TMEM74Q96NL1 305 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 MIR1-1HGQ9H1L0 117 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 SMURF1Q9HCE7 757 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 TRAF6Q9Y4K3 522 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 DGKBQ9Y6T7 804 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 NID2Q14112 1375 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 KLRC4-KLRK1H3BQV0 150 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 CASKO14936 926 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 NPHS1O60500 1241 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 SORBS3O60504 671 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 LDLRP01130 860 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 NR2F1P10589 423 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 ANXA3P12429 323 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 DRD1P21728 446 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 GP5P40197 560 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 ACOT2P49753 483 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 USP46P62068 366 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 FOXO4P98177 505 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 PTSQ03393 145 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 CBFBQ13951 182 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 NFYCQ13952 458 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 SLC44A4Q53GD3 710 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 CATSPERGQ6ZRH7 1159 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 MILR1Q7Z6M3 343 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 TMEM126BQ8IUX1 230 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 DDHD1Q8NEL9 900 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 IL31RAQ8NI17 732 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 HM13Q8TCT9 377 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 SNAPC3Q92966 411 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 NSMCE2Q96MF7 247 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 RTKNQ9BST9 563 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 LGR4Q9BXB1 951 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 OR2AG1Q9H205 316 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 L2HGDHQ9H9P8 463 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 PAQR5Q9NXK6 330 aaPredicted RBP2.69□□□□□ -1.98
CHD9-202ENST00000398510 SRRDQ9UH36 339 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 IL36AQ9UHA7 158 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 KCND3Q9UK17 655 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 ZNF726A6NNF4 738 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 LIN7AO14910 233 aaPredicted RBP2.69□□□□□ -1.98
CHD9-202ENST00000398510 ARPC2O15144 300 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 CLDN9O95484 217 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 C1RP00736 705 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 CHRNA1P02708 482 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 PECAM1P16284 738 aaPredicted RBP2.69□□□□□ -1.98
CHD9-202ENST00000398510 CCNCP24863 283 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 RBM34P42696 430 aaKnown RBP2.69□□□□□ -1.98
CHD9-202ENST00000398510 SSR2P43308 183 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 DMTNQ08495 405 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 HKDC1Q2TB90 917 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 GPAT3Q53EU6 434 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 C9orf57Q5W0N0 161 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 ZNF470Q6ECI4 717 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 CMTR2Q8IYT2 770 aaKnown RBP2.69□□□□□ -1.98
CHD9-202ENST00000398510 FITM2Q8N6M3 262 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 TMEM161BQ8NDZ6 487 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 SPATA4Q8NEY3 305 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 IPCEF1Q8WWN9 437 aaPredicted RBP2.69□□□□□ -1.98
CHD9-202ENST00000398510 SPOCK3Q9BQ16 436 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 ZDHHC5Q9C0B5 715 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 NXF3Q9H4D5 531 aaKnown RBP2.69□□□□□ -1.98
CHD9-202ENST00000398510 SRA1Q9HD15 236 aaKnown RBP2.69□□□□□ -1.98
CHD9-202ENST00000398510 GDAP2Q9NXN4 497 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 XPR1Q9UBH6 696 aa2.69□□□□□ -1.98
CHD9-202ENST00000398510 LEF1Q9UJU2 399 aaPredicted RBP2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms