RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 SLC41A2Q96JW4 573 aa13.58□□□□□ -0.24
SEC13-204ENST00000397099 CATSPER2Q96P56 530 aa13.58□□□□□ -0.24
SEC13-204ENST00000397099 OR6C1Q96RD1 312 aa13.58□□□□□ -0.24
SEC13-204ENST00000397099 FERD3LQ96RJ6 166 aa13.58□□□□□ -0.24
SEC13-204ENST00000397099 TCF12Q99081 682 aa13.58□□□□□ -0.24
SEC13-204ENST00000397099 ARHGAP9Q9BRR9 750 aa13.58□□□□□ -0.24
SEC13-204ENST00000397099 KIFC1Q9BW19 673 aa13.58□□□□□ -0.24
SEC13-204ENST00000397099 CARD6Q9BX69 1037 aa13.58□□□□□ -0.24
SEC13-204ENST00000397099 SPRY4Q9C004 299 aa13.58□□□□□ -0.24
SEC13-204ENST00000397099 FAM117AQ9C073 453 aa13.58□□□□□ -0.24
SEC13-204ENST00000397099 SEMA4CQ9C0C4 833 aa13.58□□□□□ -0.24
SEC13-204ENST00000397099 SRMSQ9H3Y6 488 aa13.58□□□□□ -0.24
SEC13-204ENST00000397099 C1GALT1Q9NS00 363 aa13.58□□□□□ -0.24
SEC13-204ENST00000397099 CATSPERZQ9NTU4 200 aa13.58□□□□□ -0.24
SEC13-204ENST00000397099 FAM8A1Q9UBU6 413 aa13.58□□□□□ -0.24
SEC13-204ENST00000397099 VPS9D1Q9Y2B5 631 aa13.58□□□□□ -0.24
SEC13-204ENST00000397099 CFAP20Q9Y6A4 193 aaKnown RBP13.58□□□□□ -0.24
SEC13-204ENST00000397099 GCN1Q92616 2671 aaKnown RBP13.58□□□□□ -0.24
SEC13-204ENST00000397099 OR6C74A6NCV1 312 aa13.57□□□□□ -0.24
SEC13-204ENST00000397099 PRMT5O14744 637 aaPredicted RBP13.57□□□□□ -0.24
SEC13-204ENST00000397099 CD3EAPO15446 510 aaKnown RBP13.57□□□□□ -0.24
SEC13-204ENST00000397099 MSL3P1P0C860 447 aa13.57□□□□□ -0.24
SEC13-204ENST00000397099 PLA2G2AP14555 144 aa13.57□□□□□ -0.24
SEC13-204ENST00000397099 FNTAP49354 379 aa13.57□□□□□ -0.24
SEC13-204ENST00000397099 SESN2P58004 480 aaPredicted RBP13.57□□□□□ -0.24
SEC13-204ENST00000397099 BOP1Q14137 746 aaKnown RBP13.57□□□□□ -0.24
SEC13-204ENST00000397099 CRTC2Q53ET0 693 aaPredicted RBP13.57□□□□□ -0.24
SEC13-204ENST00000397099 DNAJC21Q5F1R6 531 aaKnown RBP13.57□□□□□ -0.24
SEC13-204ENST00000397099 CCDC137Q6PK04 289 aaKnown RBP13.57□□□□□ -0.24
SEC13-204ENST00000397099 RASGRP3Q8IV61 690 aa13.57□□□□□ -0.24
SEC13-204ENST00000397099 REXO1L1PQ8IX06 675 aa13.57□□□□□ -0.24
SEC13-204ENST00000397099 SPDYE1Q8NFV5 336 aaPredicted RBP13.57□□□□□ -0.24
SEC13-204ENST00000397099 ELMO1Q92556 727 aa13.57□□□□□ -0.24
SEC13-204ENST00000397099 MED8Q96G25 268 aa13.57□□□□□ -0.24
SEC13-204ENST00000397099 PANX3Q96QZ0 392 aa13.57□□□□□ -0.24
SEC13-204ENST00000397099 OSBPL9Q96SU4 736 aa13.57□□□□□ -0.24
SEC13-204ENST00000397099 ULBP3Q9BZM4 244 aa13.57□□□□□ -0.24
SEC13-204ENST00000397099 FANCEQ9HB96 536 aa13.57□□□□□ -0.24
SEC13-204ENST00000397099 XAB2Q9HCS7 855 aaKnown RBP13.57□□□□□ -0.24
SEC13-204ENST00000397099 CHRAC1Q9NRG0 131 aa13.57□□□□□ -0.24
SEC13-204ENST00000397099 TREX1Q9NSU2 369 aa13.57□□□□□ -0.24
SEC13-204ENST00000397099 SAMD15Q9P1V8 674 aa13.57□□□□□ -0.24
SEC13-204ENST00000397099 RARRES3Q9UL19 164 aa13.57□□□□□ -0.24
SEC13-204ENST00000397099 PCDHGA4Q9Y5G9 962 aa13.57□□□□□ -0.24
SEC13-204ENST00000397099 IGHV5-51A0A0C4DH38 117 aa13.56□□□□□ -0.24
SEC13-204ENST00000397099 SLC5A10A0PJK1 596 aa13.56□□□□□ -0.24
SEC13-204ENST00000397099 CCDC78A2IDD5 438 aa13.56□□□□□ -0.24
SEC13-204ENST00000397099 ZNF891A8MT65 544 aaPredicted RBP13.56□□□□□ -0.24
SEC13-204ENST00000397099 C2orf74A8MZ97 194 aa13.56□□□□□ -0.24
SEC13-204ENST00000397099 H3BMM5 538 aa13.56□□□□□ -0.24
SEC13-204ENST00000397099 KRT14P02533 472 aa13.56□□□□□ -0.24
SEC13-204ENST00000397099 APOA4P06727 396 aa13.56□□□□□ -0.24
SEC13-204ENST00000397099 CCNYL3P0C7X3 344 aa13.56□□□□□ -0.24
SEC13-204ENST00000397099 TCP1P17987 556 aaKnown RBP13.56□□□□□ -0.24
SEC13-204ENST00000397099 SHMT2P34897 504 aa13.56□□□□□ -0.24
SEC13-204ENST00000397099 COILP38432 576 aaPredicted RBP13.56□□□□□ -0.24
SEC13-204ENST00000397099 SEPHS1P49903 392 aa13.56□□□□□ -0.24
SEC13-204ENST00000397099 GPS1Q13098 491 aa13.56□□□□□ -0.24
SEC13-204ENST00000397099 TMED2Q15363 201 aa13.56□□□□□ -0.24
SEC13-204ENST00000397099 ZNF534Q76KX8 674 aa13.56□□□□□ -0.24
SEC13-204ENST00000397099 AMIGO1Q86WK6 493 aa13.56□□□□□ -0.24
SEC13-204ENST00000397099 D2HGDHQ8N465 521 aa13.56□□□□□ -0.24
SEC13-204ENST00000397099 MCUQ8NE86 351 aa13.56□□□□□ -0.24
SEC13-204ENST00000397099 OR4E2Q8NGC2 313 aa13.56□□□□□ -0.24
SEC13-204ENST00000397099 OR5K2Q8NHB8 316 aa13.56□□□□□ -0.24
SEC13-204ENST00000397099 GSDMBQ8TAX9 411 aa13.56□□□□□ -0.24
SEC13-204ENST00000397099 SLC45A3Q96JT2 553 aa13.56□□□□□ -0.24
SEC13-204ENST00000397099 ZNF778Q96MU6 729 aa13.56□□□□□ -0.24
SEC13-204ENST00000397099 GPN2Q9H9Y4 310 aaPredicted RBP13.56□□□□□ -0.24
SEC13-204ENST00000397099 LATS2Q9NRM7 1088 aa13.56□□□□□ -0.24
SEC13-204ENST00000397099 OR6C2Q9NZP2 312 aa13.56□□□□□ -0.24
SEC13-204ENST00000397099 SLC2A6Q9UGQ3 507 aa13.56□□□□□ -0.24
SEC13-204ENST00000397099 GNPTGQ9UJJ9 305 aa13.56□□□□□ -0.24
SEC13-204ENST00000397099 KCND3Q9UK17 655 aa13.56□□□□□ -0.24
SEC13-204ENST00000397099 POMT2Q9UKY4 750 aa13.56□□□□□ -0.24
SEC13-204ENST00000397099 SOX13Q9UN79 622 aa13.56□□□□□ -0.24
SEC13-204ENST00000397099 ASF1AQ9Y294 204 aa13.56□□□□□ -0.24
SEC13-204ENST00000397099 BTRCQ9Y297 605 aa13.56□□□□□ -0.24
SEC13-204ENST00000397099 OR51F1A6NGY5 319 aa13.55□□□□□ -0.24
SEC13-204ENST00000397099 KIF1CO43896 1103 aaKnown RBP13.55□□□□□ -0.24
SEC13-204ENST00000397099 PHF2O75151 1096 aa13.55□□□□□ -0.24
SEC13-204ENST00000397099 NDUFS3O75489 264 aa13.55□□□□□ -0.24
SEC13-204ENST00000397099 DLGAP3O95886 979 aa13.55□□□□□ -0.24
SEC13-204ENST00000397099 RECKO95980 971 aa13.55□□□□□ -0.24
SEC13-204ENST00000397099 PRSS56P0CW18 603 aa13.55□□□□□ -0.24
SEC13-204ENST00000397099 RPS3P23396 243 aaKnown RBP eCLIP13.55□□□□□ -0.248e-23■■□□□ 13.5
SEC13-204ENST00000397099 ACADLP28330 430 aa13.55□□□□□ -0.24
SEC13-204ENST00000397099 PDHA2P29803 388 aa13.55□□□□□ -0.24
SEC13-204ENST00000397099 STAT5AP42229 794 aa13.55□□□□□ -0.24
SEC13-204ENST00000397099 ADARP55265 1226 aaKnown RBP13.55□□□□□ -0.24
SEC13-204ENST00000397099 TUBB4BP68371 445 aa13.55□□□□□ -0.24
SEC13-204ENST00000397099 TUBB3Q13509 450 aa13.55□□□□□ -0.24
SEC13-204ENST00000397099 TUBB2AQ13885 445 aa13.55□□□□□ -0.24
SEC13-204ENST00000397099 KCNJ11Q14654 390 aa13.55□□□□□ -0.24
SEC13-204ENST00000397099 PTRHD1Q6GMV3 140 aaKnown RBP13.55□□□□□ -0.24
SEC13-204ENST00000397099 DUS1LQ6P1R4 473 aaKnown RBP13.55□□□□□ -0.24
SEC13-204ENST00000397099 C6orf15Q6UXA7 325 aaPredicted RBP13.55□□□□□ -0.24
SEC13-204ENST00000397099 PRUNE1Q86TP1 453 aa13.55□□□□□ -0.24
SEC13-204ENST00000397099 HOOK3Q86VS8 718 aa13.55□□□□□ -0.24
SEC13-204ENST00000397099 SLC35F6Q8N357 371 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms