RNA–Protein interactions for RNA: ENST00000396682.6

RPA3-202, Transcript of replication protein A3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RPA3, Length 847 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-202ENST00000396682 PREPP48147 710 aa12.88□□□□□ -0.35
RPA3-202ENST00000396682 LMAN1P49257 510 aa12.88□□□□□ -0.35
RPA3-202ENST00000396682 CDKN1CP49918 316 aaPredicted RBP12.88□□□□□ -0.35
RPA3-202ENST00000396682 VAV2P52735 878 aa12.88□□□□□ -0.35
RPA3-202ENST00000396682 ZNF140P52738 457 aaPredicted RBP12.88□□□□□ -0.35
RPA3-202ENST00000396682 GEMP55040 296 aa12.88□□□□□ -0.35
RPA3-202ENST00000396682 TMPRSS15P98073 1019 aa12.88□□□□□ -0.35
RPA3-202ENST00000396682 NCF4Q15080 339 aa12.88□□□□□ -0.35
RPA3-202ENST00000396682 ZNF385CQ66K41 422 aaPredicted RBP12.88□□□□□ -0.35
RPA3-202ENST00000396682 DENND5AQ6IQ26 1287 aa12.88□□□□□ -0.35
RPA3-202ENST00000396682 CCDC50Q8IVM0 306 aa12.88□□□□□ -0.35
RPA3-202ENST00000396682 RCOR2Q8IZ40 523 aa12.88□□□□□ -0.35
RPA3-202ENST00000396682 NXPE1Q8N323 547 aa12.88□□□□□ -0.35
RPA3-202ENST00000396682 RBMXL3Q8N7X1 1067 aaKnown RBP12.88□□□□□ -0.35
RPA3-202ENST00000396682 SSC4DQ8WTU2 575 aa12.88□□□□□ -0.35
RPA3-202ENST00000396682 LCN9Q8WX39 176 aa12.88□□□□□ -0.35
RPA3-202ENST00000396682 CCM2Q9BSQ5 444 aa12.88□□□□□ -0.35
RPA3-202ENST00000396682 MFRPQ9BY79 579 aa12.88□□□□□ -0.35
RPA3-202ENST00000396682 KLHL25Q9H0H3 589 aa12.88□□□□□ -0.35
RPA3-202ENST00000396682 SRMSQ9H3Y6 488 aa12.88□□□□□ -0.35
RPA3-202ENST00000396682 COG4Q9H9E3 785 aa12.88□□□□□ -0.35
RPA3-202ENST00000396682 FANCEQ9HB96 536 aa12.88□□□□□ -0.35
RPA3-202ENST00000396682 CRLS1Q9UJA2 301 aa12.88□□□□□ -0.35
RPA3-202ENST00000396682 PCDHGB7Q9Y5F8 929 aa12.88□□□□□ -0.35
RPA3-202ENST00000396682 HEBP2Q9Y5Z4 205 aa12.88□□□□□ -0.35
RPA3-202ENST00000396682 PIKFYVEQ9Y2I7 2098 aa12.87□□□□□ -0.35
RPA3-202ENST00000396682 IGLV3-16A0A075B6K0 115 aa12.87□□□□□ -0.35
RPA3-202ENST00000396682 CCDC66A2RUB6 948 aa12.87□□□□□ -0.35
RPA3-202ENST00000396682 A6NL46 340 aa12.87□□□□□ -0.35
RPA3-202ENST00000396682 H7C0C1 242 aa12.87□□□□□ -0.35
RPA3-202ENST00000396682 APOC4-APOC2K7ER74 178 aa12.87□□□□□ -0.35
RPA3-202ENST00000396682 MATN2O00339 956 aa12.87□□□□□ -0.35
RPA3-202ENST00000396682 APOC2P02655 101 aa12.87□□□□□ -0.35
RPA3-202ENST00000396682 ATP1B2P14415 290 aaPredicted RBP12.87□□□□□ -0.35
RPA3-202ENST00000396682 CYP2A7P20853 494 aa12.87□□□□□ -0.35
RPA3-202ENST00000396682 PDHA2P29803 388 aa12.87□□□□□ -0.35
RPA3-202ENST00000396682 ATP5OP48047 213 aa12.87□□□□□ -0.35
RPA3-202ENST00000396682 MRPL49Q13405 166 aaKnown RBP12.87□□□□□ -0.35
RPA3-202ENST00000396682 ATP1A4Q13733 1029 aa12.87□□□□□ -0.35
RPA3-202ENST00000396682 KRT33BQ14525 404 aa12.87□□□□□ -0.35
RPA3-202ENST00000396682 SLC6A19Q695T7 634 aa12.87□□□□□ -0.35
RPA3-202ENST00000396682 CDHR3Q6ZTQ4 885 aa12.87□□□□□ -0.35
RPA3-202ENST00000396682 ADGRF3Q8IZF5 1079 aa12.87□□□□□ -0.35
RPA3-202ENST00000396682 GLIS1Q8NBF1 620 aa12.87□□□□□ -0.35
RPA3-202ENST00000396682 PHC3Q8NDX5 983 aa12.87□□□□□ -0.35
RPA3-202ENST00000396682 OR52E1Q8NGJ3 308 aa12.87□□□□□ -0.35
RPA3-202ENST00000396682 ACTL9Q8TC94 416 aa12.87□□□□□ -0.35
RPA3-202ENST00000396682 DCUN1D1Q96GG9 259 aa12.87□□□□□ -0.35
RPA3-202ENST00000396682 TRAPPC9Q96Q05 1148 aa12.87□□□□□ -0.35
RPA3-202ENST00000396682 FERD3LQ96RJ6 166 aa12.87□□□□□ -0.35
RPA3-202ENST00000396682 COPS8Q99627 209 aa12.87□□□□□ -0.35
RPA3-202ENST00000396682 TFB2MQ9H5Q4 396 aaKnown RBP12.87□□□□□ -0.35
RPA3-202ENST00000396682 SYTL2Q9HCH5 934 aa12.87□□□□□ -0.35
RPA3-202ENST00000396682 CCDC88CQ9P219 2028 aa12.86□□□□□ -0.35
RPA3-202ENST00000396682 C17orf113A0A1B0GUU1 675 aa12.86□□□□□ -0.35
RPA3-202ENST00000396682 H3BMH7 237 aa12.86□□□□□ -0.35
RPA3-202ENST00000396682 ZNF749O43361 778 aa12.86□□□□□ -0.35
RPA3-202ENST00000396682 HCRTR1O43613 425 aa12.86□□□□□ -0.35
RPA3-202ENST00000396682 LDB2O43679 373 aa12.86□□□□□ -0.35
RPA3-202ENST00000396682 DPM1O60762 260 aa12.86□□□□□ -0.35
RPA3-202ENST00000396682 KLF7O75840 302 aaPredicted RBP12.86□□□□□ -0.35
RPA3-202ENST00000396682 TPM1P09493 284 aa12.86□□□□□ -0.35
RPA3-202ENST00000396682 PRSS56P0CW18 603 aa12.86□□□□□ -0.35
RPA3-202ENST00000396682 RALBP11234 206 aa12.86□□□□□ -0.35
RPA3-202ENST00000396682 OTUD4Q01804 1114 aaKnown RBP12.86□□□□□ -0.35
RPA3-202ENST00000396682 TBX2Q13207 712 aaPredicted RBP12.86□□□□□ -0.35
RPA3-202ENST00000396682 RAPSNQ13702 412 aa12.86□□□□□ -0.35
RPA3-202ENST00000396682 EIF2S3LQ2VIR3 472 aaKnown RBP12.86□□□□□ -0.35
RPA3-202ENST00000396682 ANKRD20A2Q5SQ80 823 aa12.86□□□□□ -0.35
RPA3-202ENST00000396682 ANKRD20A1Q5TYW2 823 aa12.86□□□□□ -0.35
RPA3-202ENST00000396682 ANKRD20A3Q5VUR7 823 aa12.86□□□□□ -0.35
RPA3-202ENST00000396682 ITPRIPL1Q6GPH6 555 aa12.86□□□□□ -0.35
RPA3-202ENST00000396682 C11orf63Q6NUN7 778 aa12.86□□□□□ -0.35
RPA3-202ENST00000396682 MED25Q71SY5 747 aa12.86□□□□□ -0.35
RPA3-202ENST00000396682 SNX20Q7Z614 316 aa12.86□□□□□ -0.35
RPA3-202ENST00000396682 TMEM102Q8N9M5 508 aaPredicted RBP12.86□□□□□ -0.35
RPA3-202ENST00000396682 PNPLA2Q96AD5 504 aa12.86□□□□□ -0.35
RPA3-202ENST00000396682 ULK4Q96C45 1275 aa12.86□□□□□ -0.35
RPA3-202ENST00000396682 RBM41Q96IZ5 413 aaKnown RBP12.86□□□□□ -0.35
RPA3-202ENST00000396682 SMAD5Q99717 465 aaKnown RBP12.86□□□□□ -0.35
RPA3-202ENST00000396682 FAM118BQ9BPY3 351 aa12.86□□□□□ -0.35
RPA3-202ENST00000396682 ANP32EQ9BTT0 268 aa12.86□□□□□ -0.35
RPA3-202ENST00000396682 XKR8Q9H6D3 395 aa12.86□□□□□ -0.35
RPA3-202ENST00000396682 FAM60AQ9NP50 221 aa12.86□□□□□ -0.35
RPA3-202ENST00000396682 GPR83Q9NYM4 423 aa12.86□□□□□ -0.35
RPA3-202ENST00000396682 SNRNP200O75643 2136 aaKnown RBP12.85□□□□□ -0.35
RPA3-202ENST00000396682 TRBV5-4A0A0C4DH59 114 aa12.85□□□□□ -0.35
RPA3-202ENST00000396682 A1L4Q6 167 aa12.85□□□□□ -0.35
RPA3-202ENST00000396682 E7EQ34 232 aa12.85□□□□□ -0.35
RPA3-202ENST00000396682 KRT86O43790 486 aa12.85□□□□□ -0.35
RPA3-202ENST00000396682 CRTAMO95727 393 aa12.85□□□□□ -0.35
RPA3-202ENST00000396682 CTSBP07858 339 aa12.85□□□□□ -0.35
RPA3-202ENST00000396682 ITGALP20701 1170 aa12.85□□□□□ -0.35
RPA3-202ENST00000396682 MC4RP32245 332 aa12.85□□□□□ -0.35
RPA3-202ENST00000396682 MAGEA1P43355 309 aa12.85□□□□□ -0.35
RPA3-202ENST00000396682 CD151P48509 253 aa12.85□□□□□ -0.35
RPA3-202ENST00000396682 PRKG2Q13237 762 aa12.85□□□□□ -0.35
RPA3-202ENST00000396682 BOP1Q14137 746 aaKnown RBP12.85□□□□□ -0.35
RPA3-202ENST00000396682 SPARCL1Q14515 664 aa12.85□□□□□ -0.35
RPA3-202ENST00000396682 ZIC1Q15915 447 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms