RNA–Protein interactions for RNA: ENST00000396653.2

AP1S3-202, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 4 BASIC

Gene AP1S3, Length 589 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-202ENST00000396653 ASXL3Q9C0F0 2248 aa16.03■□□□□ 0.16
AP1S3-202ENST00000396653 CCDC151A5D8V7 595 aa16.03■□□□□ 0.16
AP1S3-202ENST00000396653 LILRA5A6NI73 299 aa16.03■□□□□ 0.16
AP1S3-202ENST00000396653 ZW10O43264 779 aa16.03■□□□□ 0.16
AP1S3-202ENST00000396653 FAM155BO75949 473 aa16.03■□□□□ 0.16
AP1S3-202ENST00000396653 MPC1LP0DKB6 136 aa16.03■□□□□ 0.16
AP1S3-202ENST00000396653 CDK4P11802 303 aa16.03■□□□□ 0.16
AP1S3-202ENST00000396653 CNTFP26441 200 aa16.03■□□□□ 0.16
AP1S3-202ENST00000396653 HSD17B3P37058 310 aa16.03■□□□□ 0.16
AP1S3-202ENST00000396653 MSH2P43246 934 aa16.03■□□□□ 0.16
AP1S3-202ENST00000396653 GPR3P46089 330 aa16.03■□□□□ 0.16
AP1S3-202ENST00000396653 RGS4P49798 205 aa16.03■□□□□ 0.16
AP1S3-202ENST00000396653 NOVA1P51513 510 aaKnown RBP16.03■□□□□ 0.16
AP1S3-202ENST00000396653 EPHA4P54764 986 aa16.03■□□□□ 0.16
AP1S3-202ENST00000396653 SLC12A2P55011 1212 aa16.03■□□□□ 0.16
AP1S3-202ENST00000396653 TAS2R39P59534 338 aa16.03■□□□□ 0.16
AP1S3-202ENST00000396653 BIRC2Q13490 618 aa16.03■□□□□ 0.16
AP1S3-202ENST00000396653 ZKSCAN8Q15776 578 aaPredicted RBP16.03■□□□□ 0.16
AP1S3-202ENST00000396653 ACSBG2Q5FVE4 666 aa16.03■□□□□ 0.16
AP1S3-202ENST00000396653 EFL1Q7Z2Z2 1120 aaKnown RBP16.03■□□□□ 0.16
AP1S3-202ENST00000396653 PIM3Q86V86 326 aa16.03■□□□□ 0.16
AP1S3-202ENST00000396653 UHMK1Q8TAS1 419 aaKnown RBP16.03■□□□□ 0.16
AP1S3-202ENST00000396653 IFI44Q8TCB0 444 aa16.03■□□□□ 0.16
AP1S3-202ENST00000396653 TFGQ92734 400 aaPredicted RBP16.03■□□□□ 0.16
AP1S3-202ENST00000396653 FAM136AQ96C01 138 aa16.03■□□□□ 0.16
AP1S3-202ENST00000396653 CCDC77Q9BR77 488 aa16.03■□□□□ 0.16
AP1S3-202ENST00000396653 LRIT1Q9P2V4 623 aa16.03■□□□□ 0.16
AP1S3-202ENST00000396653 SLC24A2Q9UI40 661 aa16.03■□□□□ 0.16
AP1S3-202ENST00000396653 MTO1Q9Y2Z2 717 aaKnown RBP16.03■□□□□ 0.16
AP1S3-202ENST00000396653 RNF215Q9Y6U7 377 aa16.03■□□□□ 0.16
AP1S3-202ENST00000396653 COLEC10Q9Y6Z7 277 aa16.03■□□□□ 0.16
AP1S3-202ENST00000396653 TRBV23OR9-2A0A075B6M9 112 aa16.02■□□□□ 0.16
AP1S3-202ENST00000396653 CPED1A4D0V7 1026 aa16.02■□□□□ 0.16
AP1S3-202ENST00000396653 RHPN2P1A8MT19 583 aa16.02■□□□□ 0.16
AP1S3-202ENST00000396653 POC1B-GALNT4F8VUJ3 575 aa16.02■□□□□ 0.16
AP1S3-202ENST00000396653 PPM1DO15297 605 aa16.02■□□□□ 0.16
AP1S3-202ENST00000396653 ERLIN1O75477 346 aa16.02■□□□□ 0.16
AP1S3-202ENST00000396653 RFPL3O75679 317 aa16.02■□□□□ 0.16
AP1S3-202ENST00000396653 KRT38O76015 456 aa16.02■□□□□ 0.16
AP1S3-202ENST00000396653 DKK1O94907 266 aa16.02■□□□□ 0.16
AP1S3-202ENST00000396653 KCNK5O95279 499 aa16.02■□□□□ 0.16
AP1S3-202ENST00000396653 RPN2P04844 631 aa16.02■□□□□ 0.16
AP1S3-202ENST00000396653 NUDT17P0C025 328 aa16.02■□□□□ 0.16
AP1S3-202ENST00000396653 ZNF37AP17032 561 aaPredicted RBP16.02■□□□□ 0.16
AP1S3-202ENST00000396653 DNAJC3Q13217 504 aa16.02■□□□□ 0.16
AP1S3-202ENST00000396653 PUM1Q14671 1186 aaKnown RBP eCLIP16.02■□□□□ 0.16
AP1S3-202ENST00000396653 USP10Q14694 798 aaKnown RBP16.02■□□□□ 0.16
AP1S3-202ENST00000396653 PAQR3Q6TCH7 311 aa16.02■□□□□ 0.16
AP1S3-202ENST00000396653 TMEM26Q6ZUK4 368 aa16.02■□□□□ 0.16
AP1S3-202ENST00000396653 CCDC91Q7Z6B0 441 aa16.02■□□□□ 0.16
AP1S3-202ENST00000396653 CPNE9Q8IYJ1 553 aa16.02■□□□□ 0.16
AP1S3-202ENST00000396653 TBC1D21Q8IYX1 336 aa16.02■□□□□ 0.16
AP1S3-202ENST00000396653 ACVR1CQ8NER5 493 aa16.02■□□□□ 0.16
AP1S3-202ENST00000396653 MYRIPQ8NFW9 859 aa16.02■□□□□ 0.16
AP1S3-202ENST00000396653 WDR48Q8TAF3 677 aa16.02■□□□□ 0.16
AP1S3-202ENST00000396653 DCAKDQ8WVC6 231 aa16.02■□□□□ 0.16
AP1S3-202ENST00000396653 CCDC74AQ96AQ1 378 aa16.02■□□□□ 0.16
AP1S3-202ENST00000396653 FOPNLQ96NB1 174 aa16.02■□□□□ 0.16
AP1S3-202ENST00000396653 EPB41L1Q9H4G0 881 aa16.02■□□□□ 0.16
AP1S3-202ENST00000396653 SYTL2Q9HCH5 934 aa16.02■□□□□ 0.16
AP1S3-202ENST00000396653 SLC40A1Q9NP59 571 aa16.02■□□□□ 0.16
AP1S3-202ENST00000396653 TOR4AQ9NXH8 423 aa16.02■□□□□ 0.16
AP1S3-202ENST00000396653 SLC39A10Q9ULF5 831 aa16.02■□□□□ 0.16
AP1S3-202ENST00000396653 ASF1AQ9Y294 204 aa16.02■□□□□ 0.16
AP1S3-202ENST00000396653 COL27A1Q8IZC6 1860 aaPredicted RBP16.01■□□□□ 0.15
AP1S3-202ENST00000396653 WISP3O95389 354 aaPredicted RBP16.01■□□□□ 0.15
AP1S3-202ENST00000396653 MATN4O95460 622 aa16.01■□□□□ 0.15
AP1S3-202ENST00000396653 MYF5P13349 255 aa16.01■□□□□ 0.15
AP1S3-202ENST00000396653 STMN1P16949 149 aa16.01■□□□□ 0.15
AP1S3-202ENST00000396653 RASA2Q15283 850 aa16.01■□□□□ 0.15
AP1S3-202ENST00000396653 PERM1Q5SV97 790 aa16.01■□□□□ 0.15
AP1S3-202ENST00000396653 DUS1LQ6P1R4 473 aaKnown RBP16.01■□□□□ 0.15
AP1S3-202ENST00000396653 ADGRD1Q6QNK2 874 aa16.01■□□□□ 0.15
AP1S3-202ENST00000396653 RASGRP3Q8IV61 690 aa16.01■□□□□ 0.15
AP1S3-202ENST00000396653 NKAPQ8N5F7 415 aaKnown RBP16.01■□□□□ 0.15
AP1S3-202ENST00000396653 OR5K2Q8NHB8 316 aa16.01■□□□□ 0.15
AP1S3-202ENST00000396653 ISL2Q96A47 359 aa16.01■□□□□ 0.15
AP1S3-202ENST00000396653 MRRFQ96E11 262 aaKnown RBP16.01■□□□□ 0.15
AP1S3-202ENST00000396653 PDLIM5Q96HC4 596 aaKnown RBP16.01■□□□□ 0.15
AP1S3-202ENST00000396653 SLC38A3Q99624 504 aa16.01■□□□□ 0.15
AP1S3-202ENST00000396653 TRIT1Q9H3H1 467 aaKnown RBP16.01■□□□□ 0.15
AP1S3-202ENST00000396653 KIR3DX1Q9H7L2 352 aa16.01■□□□□ 0.15
AP1S3-202ENST00000396653 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.01■□□□□ 0.15
AP1S3-202ENST00000396653 POLG2Q9UHN1 485 aa16.01■□□□□ 0.15
AP1S3-202ENST00000396653 APOBEC2Q9Y235 224 aaKnown RBP16.01■□□□□ 0.15
AP1S3-202ENST00000396653 CFAP20Q9Y6A4 193 aaKnown RBP16.01■□□□□ 0.15
AP1S3-202ENST00000396653 HMX2A2RU54 273 aa16■□□□□ 0.15
AP1S3-202ENST00000396653 FAM221BA6H8Z2 402 aa16■□□□□ 0.15
AP1S3-202ENST00000396653 KDM1AO60341 852 aa16■□□□□ 0.15
AP1S3-202ENST00000396653 PSIP1O75475 530 aaKnown RBP16■□□□□ 0.15
AP1S3-202ENST00000396653 TCEA3O75764 348 aa16■□□□□ 0.15
AP1S3-202ENST00000396653 KRT37O76014 449 aa16■□□□□ 0.15
AP1S3-202ENST00000396653 TSPAN12O95859 305 aa16■□□□□ 0.15
AP1S3-202ENST00000396653 SAT1P21673 171 aa16■□□□□ 0.15
AP1S3-202ENST00000396653 GCAP28676 217 aa16■□□□□ 0.15
AP1S3-202ENST00000396653 CRABP2P29373 138 aa16■□□□□ 0.15
AP1S3-202ENST00000396653 CCNFP41002 786 aa16■□□□□ 0.15
AP1S3-202ENST00000396653 SERPINB8P50452 374 aa16■□□□□ 0.15
AP1S3-202ENST00000396653 CSRP3P50461 194 aa16■□□□□ 0.15
AP1S3-202ENST00000396653 IL2P60568 153 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms