RNA–Protein interactions for RNA: ENST00000396366.6

FXN-203, Transcript of frataxin, humanhuman

TSL 2 BASIC

Gene FXN, Length 922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-203ENST00000396366 SRMSQ9H3Y6 488 aa17.79■□□□□ 0.44
FXN-203ENST00000396366 LZTFL1Q9NQ48 299 aa17.79■□□□□ 0.44
FXN-203ENST00000396366 LHX9Q9NQ69 397 aa17.79■□□□□ 0.44
FXN-203ENST00000396366 RAB6BQ9NRW1 208 aa17.79■□□□□ 0.44
FXN-203ENST00000396366 HEBP2Q9Y5Z4 205 aa17.79■□□□□ 0.44
FXN-203ENST00000396366 SPTA1P02549 2419 aa17.79■□□□□ 0.44
FXN-203ENST00000396366 SPTBP11277 2137 aa17.78■□□□□ 0.44
FXN-203ENST00000396366 GSAPA4D1B5 854 aa17.78■□□□□ 0.44
FXN-203ENST00000396366 ERI2A8K979 691 aaKnown RBP17.78■□□□□ 0.44
FXN-203ENST00000396366 E7EVH7 732 aa17.78■□□□□ 0.44
FXN-203ENST00000396366 IFRD1O00458 451 aaPredicted RBP17.78■□□□□ 0.44
FXN-203ENST00000396366 BTN3A1O00481 513 aa17.78■□□□□ 0.44
FXN-203ENST00000396366 SUV39H1O43463 412 aa17.78■□□□□ 0.44
FXN-203ENST00000396366 ZBTB11O95625 1053 aaPredicted RBP17.78■□□□□ 0.44
FXN-203ENST00000396366 GOT2P00505 430 aaKnown RBP17.78■□□□□ 0.44
FXN-203ENST00000396366 RPL22P35268 128 aaKnown RBP17.78■□□□□ 0.44
FXN-203ENST00000396366 FDFT1P37268 417 aa17.78■□□□□ 0.44
FXN-203ENST00000396366 CD151P48509 253 aa17.78■□□□□ 0.44
FXN-203ENST00000396366 TUBB4BP68371 445 aa17.78■□□□□ 0.44
FXN-203ENST00000396366 TUBB2AQ13885 445 aa17.78■□□□□ 0.44
FXN-203ENST00000396366 BOP1Q14137 746 aaKnown RBP17.78■□□□□ 0.44
FXN-203ENST00000396366 SLC38A9Q8NBW4 561 aa17.78■□□□□ 0.44
FXN-203ENST00000396366 TFGQ92734 400 aaPredicted RBP17.78■□□□□ 0.44
FXN-203ENST00000396366 HGH1Q9BTY7 390 aa17.78■□□□□ 0.44
FXN-203ENST00000396366 TUBB2BQ9BVA1 445 aa17.78■□□□□ 0.44
FXN-203ENST00000396366 TLR10Q9BXR5 811 aa17.78■□□□□ 0.44
FXN-203ENST00000396366 FRMD8P1Q9BZ68 369 aaPredicted RBP17.78■□□□□ 0.44
FXN-203ENST00000396366 ADNPQ9H2P0 1102 aa17.78■□□□□ 0.44
FXN-203ENST00000396366 CASS4Q9NQ75 786 aa17.78■□□□□ 0.44
FXN-203ENST00000396366 ZNF71Q9NQZ8 489 aaPredicted RBP17.78■□□□□ 0.44
FXN-203ENST00000396366 SOHLH2Q9NX45 425 aa17.78■□□□□ 0.44
FXN-203ENST00000396366 POMT2Q9UKY4 750 aa17.78■□□□□ 0.44
FXN-203ENST00000396366 GOLGA6L6A8MZA4 724 aa17.77■□□□□ 0.44
FXN-203ENST00000396366 ARHGAP6O43182 974 aa17.77■□□□□ 0.44
FXN-203ENST00000396366 AP2A2O94973 939 aa17.77■□□□□ 0.44
FXN-203ENST00000396366 TPBGLP0DKB5 382 aa17.77■□□□□ 0.44
FXN-203ENST00000396366 PVRP15151 417 aa17.77■□□□□ 0.44
FXN-203ENST00000396366 CDH3P22223 829 aa17.77■□□□□ 0.44
FXN-203ENST00000396366 ADRA1DP25100 572 aa17.77■□□□□ 0.44
FXN-203ENST00000396366 PRDX3P30048 256 aaKnown RBP17.77■□□□□ 0.44
FXN-203ENST00000396366 NSG1P42857 185 aa17.77■□□□□ 0.44
FXN-203ENST00000396366 GSDMDP57764 484 aa17.77■□□□□ 0.44
FXN-203ENST00000396366 MC1RQ01726 317 aa17.77■□□□□ 0.44
FXN-203ENST00000396366 PRKAA1Q13131 559 aa17.77■□□□□ 0.44
FXN-203ENST00000396366 SEMA5AQ13591 1074 aa17.77■□□□□ 0.44
FXN-203ENST00000396366 DNASE1L3Q13609 305 aa17.77■□□□□ 0.44
FXN-203ENST00000396366 SEMA3AQ14563 771 aa17.77■□□□□ 0.44
FXN-203ENST00000396366 TSTD2Q5T7W7 516 aa17.77■□□□□ 0.44
FXN-203ENST00000396366 ZNF534Q76KX8 674 aa17.77■□□□□ 0.44
FXN-203ENST00000396366 BPHLQ86WA6 291 aaPredicted RBP17.77■□□□□ 0.44
FXN-203ENST00000396366 OR5AR1Q8NGP9 310 aa17.77■□□□□ 0.44
FXN-203ENST00000396366 APOBEC4Q8WW27 367 aaKnown RBP17.77■□□□□ 0.44
FXN-203ENST00000396366 ELMO1Q92556 727 aa17.77■□□□□ 0.44
FXN-203ENST00000396366 TFB2MQ9H5Q4 396 aaKnown RBP17.77■□□□□ 0.44
FXN-203ENST00000396366 VPS37BQ9H9H4 285 aa17.77■□□□□ 0.44
FXN-203ENST00000396366 KCND1Q9NSA2 647 aa17.77■□□□□ 0.44
FXN-203ENST00000396366 BTRCQ9Y297 605 aa17.77■□□□□ 0.44
FXN-203ENST00000396366 MYO18BQ8IUG5 2567 aa17.77■□□□□ 0.43
FXN-203ENST00000396366 HEATR9A2RTY3 570 aa17.76■□□□□ 0.43
FXN-203ENST00000396366 CDC14CA4D256 554 aa17.76■□□□□ 0.43
FXN-203ENST00000396366 BHMG1C9JSJ3 638 aaPredicted RBP17.76■□□□□ 0.43
FXN-203ENST00000396366 SCRG1O75711 98 aa17.76■□□□□ 0.43
FXN-203ENST00000396366 MT-ND3P03897 115 aa17.76■□□□□ 0.43
FXN-203ENST00000396366 APRTP07741 180 aa17.76■□□□□ 0.43
FXN-203ENST00000396366 ST6GAL1P15907 406 aa17.76■□□□□ 0.43
FXN-203ENST00000396366 RPS18P62269 152 aaKnown RBP17.76■□□□□ 0.43
FXN-203ENST00000396366 RPA4Q13156 261 aa17.76■□□□□ 0.43
FXN-203ENST00000396366 ITIH4Q14624 930 aa17.76■□□□□ 0.43
FXN-203ENST00000396366 TMTC4Q5T4D3 741 aa17.76■□□□□ 0.43
FXN-203ENST00000396366 CYB5D1Q6P9G0 228 aa17.76■□□□□ 0.43
FXN-203ENST00000396366 LDB1Q86U70 411 aaPredicted RBP17.76■□□□□ 0.43
FXN-203ENST00000396366 AMIGO1Q86WK6 493 aa17.76■□□□□ 0.43
FXN-203ENST00000396366 TMEM126BQ8IUX1 230 aa17.76■□□□□ 0.43
FXN-203ENST00000396366 ADGRF3Q8IZF5 1079 aa17.76■□□□□ 0.43
FXN-203ENST00000396366 CCDC89Q8N998 374 aa17.76■□□□□ 0.43
FXN-203ENST00000396366 FCRL4Q96PJ5 515 aa17.76■□□□□ 0.43
FXN-203ENST00000396366 RANBP9Q96S59 729 aa17.76■□□□□ 0.43
FXN-203ENST00000396366 MVB12BQ9H7P6 319 aa17.76■□□□□ 0.43
FXN-203ENST00000396366 CHRAC1Q9NRG0 131 aa17.76■□□□□ 0.43
FXN-203ENST00000396366 ICKQ9UPZ9 632 aa17.76■□□□□ 0.43
FXN-203ENST00000396366 PCDHB3Q9Y5E6 796 aa17.76■□□□□ 0.43
FXN-203ENST00000396366 KCNMB2Q9Y691 235 aa17.76■□□□□ 0.43
FXN-203ENST00000396366 FLNBO75369 2602 aaKnown RBP17.76■□□□□ 0.43
FXN-203ENST00000396366 PIPSLA2A3N6 862 aa17.75■□□□□ 0.43
FXN-203ENST00000396366 LIN7AO14910 233 aaPredicted RBP17.75■□□□□ 0.43
FXN-203ENST00000396366 CREG1O75629 220 aa17.75■□□□□ 0.43
FXN-203ENST00000396366 GAS8O95995 478 aa17.75■□□□□ 0.43
FXN-203ENST00000396366 ACADLP28330 430 aa17.75■□□□□ 0.43
FXN-203ENST00000396366 KCNJ1P48048 391 aa17.75■□□□□ 0.43
FXN-203ENST00000396366 CSE1LP55060 971 aaKnown RBP17.75■□□□□ 0.43
FXN-203ENST00000396366 CRADDP78560 199 aa17.75■□□□□ 0.43
FXN-203ENST00000396366 ACVR1Q04771 509 aa17.75■□□□□ 0.43
FXN-203ENST00000396366 GPS2Q13227 327 aa17.75■□□□□ 0.43
FXN-203ENST00000396366 CCNG2Q16589 344 aa17.75■□□□□ 0.43
FXN-203ENST00000396366 CRTC2Q53ET0 693 aaPredicted RBP17.75■□□□□ 0.43
FXN-203ENST00000396366 COLEC12Q5KU26 742 aa17.75■□□□□ 0.43
FXN-203ENST00000396366 LCN10Q6JVE6 187 aa17.75■□□□□ 0.43
FXN-203ENST00000396366 ZNF449Q6P9G9 518 aa17.75■□□□□ 0.43
FXN-203ENST00000396366 PACS1Q6VY07 963 aa17.75■□□□□ 0.43
FXN-203ENST00000396366 OR6P1Q8NGX9 317 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms