RNA–Protein interactions for RNA: ENST00000396268.7

CCHCR1-203, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCHCR1, Length 2,958 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-203ENST00000396268 ELAC1Q9H777 363 aaKnown RBP13.81□□□□□ -0.2
CCHCR1-203ENST00000396268 NLE1Q9NVX2 485 aaPredicted RBP13.81□□□□□ -0.2
CCHCR1-203ENST00000396268 C2orf81A6NN90 581 aa13.81□□□□□ -0.2
CCHCR1-203ENST00000396268 IQCF5A8MTL0 148 aa13.81□□□□□ -0.2
CCHCR1-203ENST00000396268 H0YAE9 185 aa13.81□□□□□ -0.2
CCHCR1-203ENST00000396268 STX16O14662 325 aa13.81□□□□□ -0.2
CCHCR1-203ENST00000396268 AQP9O43315 295 aa13.81□□□□□ -0.2
CCHCR1-203ENST00000396268 NOBOXO60393 691 aa13.81□□□□□ -0.2
CCHCR1-203ENST00000396268 MBL2P11226 248 aaPredicted RBP13.81□□□□□ -0.2
CCHCR1-203ENST00000396268 PKMP14618 531 aaKnown RBP13.81□□□□□ -0.2
CCHCR1-203ENST00000396268 CSF2RAP15509 400 aa13.81□□□□□ -0.2
CCHCR1-203ENST00000396268 ERVPABLB-1P60509 514 aa13.81□□□□□ -0.2
CCHCR1-203ENST00000396268 C18orf21Q32NC0 220 aaPredicted RBP13.81□□□□□ -0.2
CCHCR1-203ENST00000396268 LETMD1Q6P1Q0 360 aa13.81□□□□□ -0.2
CCHCR1-203ENST00000396268 RNF19BQ6ZMZ0 732 aa13.81□□□□□ -0.2
CCHCR1-203ENST00000396268 R3HCC1LQ7Z5L2 792 aaKnown RBP13.81□□□□□ -0.2
CCHCR1-203ENST00000396268 LGI2Q8N0V4 545 aa13.81□□□□□ -0.2
CCHCR1-203ENST00000396268 LEMD2Q8NC56 503 aa13.81□□□□□ -0.2
CCHCR1-203ENST00000396268 LPCAT1Q8NF37 534 aa13.81□□□□□ -0.2
CCHCR1-203ENST00000396268 MDGA1Q8NFP4 955 aa13.81□□□□□ -0.2
CCHCR1-203ENST00000396268 OR13F1Q8NGS4 319 aa13.81□□□□□ -0.2
CCHCR1-203ENST00000396268 PNPT1Q8TCS8 783 aaKnown RBP13.81□□□□□ -0.2
CCHCR1-203ENST00000396268 BPIFB1Q8TDL5 484 aa13.81□□□□□ -0.2
CCHCR1-203ENST00000396268 TRIM43Q96BQ3 446 aaPredicted RBP13.81□□□□□ -0.2
CCHCR1-203ENST00000396268 CCDC138Q96M89 665 aa13.81□□□□□ -0.2
CCHCR1-203ENST00000396268 CGREF1Q99674 301 aa13.81□□□□□ -0.2
CCHCR1-203ENST00000396268 THUMPD3Q9BV44 507 aaKnown RBP13.81□□□□□ -0.2
CCHCR1-203ENST00000396268 MIR1-1HGQ9H1L0 117 aa13.81□□□□□ -0.2
CCHCR1-203ENST00000396268 RAD21L1Q9H4I0 556 aa13.81□□□□□ -0.2
CCHCR1-203ENST00000396268 SMURF2Q9HAU4 748 aa13.81□□□□□ -0.2
CCHCR1-203ENST00000396268 AASSQ9UDR5 926 aa13.81□□□□□ -0.2
CCHCR1-203ENST00000396268 POLR3HQ9Y535 204 aaPredicted RBP13.81□□□□□ -0.2
CCHCR1-203ENST00000396268 UNC80Q8N2C7 3258 aa13.81□□□□□ -0.2
CCHCR1-203ENST00000396268 SOBPA7XYQ1 873 aa13.8□□□□□ -0.2
CCHCR1-203ENST00000396268 TMEM189-UBE2V1I3L0A0 370 aa13.8□□□□□ -0.2
CCHCR1-203ENST00000396268 NDUFB5O43674 189 aa13.8□□□□□ -0.2
CCHCR1-203ENST00000396268 PARNO95453 639 aaKnown RBP13.8□□□□□ -0.2
CCHCR1-203ENST00000396268 ANXA6P08133 673 aa13.8□□□□□ -0.2
CCHCR1-203ENST00000396268 CNPP09543 421 aaKnown RBP13.8□□□□□ -0.2
CCHCR1-203ENST00000396268 RAP2AP10114 183 aa13.8□□□□□ -0.2
CCHCR1-203ENST00000396268 RGRP47804 291 aa13.8□□□□□ -0.2
CCHCR1-203ENST00000396268 DMPKQ09013 629 aa13.8□□□□□ -0.2
CCHCR1-203ENST00000396268 ILF2Q12905 390 aaKnown RBP13.8□□□□□ -0.2
CCHCR1-203ENST00000396268 TAF10Q12962 218 aa13.8□□□□□ -0.2
CCHCR1-203ENST00000396268 AQP6Q13520 282 aa13.8□□□□□ -0.2
CCHCR1-203ENST00000396268 LAPTM5Q13571 262 aa13.8□□□□□ -0.2
CCHCR1-203ENST00000396268 TRIP4Q15650 581 aaPredicted RBP13.8□□□□□ -0.2
CCHCR1-203ENST00000396268 FRA10AC1Q70Z53 315 aa13.8□□□□□ -0.2
CCHCR1-203ENST00000396268 THAP5Q7Z6K1 395 aa13.8□□□□□ -0.2
CCHCR1-203ENST00000396268 HS3ST5Q8IZT8 346 aa13.8□□□□□ -0.2
CCHCR1-203ENST00000396268 ZBED2Q9BTP6 218 aa13.8□□□□□ -0.2
CCHCR1-203ENST00000396268 CINPQ9BW66 212 aaPredicted RBP13.8□□□□□ -0.2
CCHCR1-203ENST00000396268 TOR3AQ9H497 397 aa13.8□□□□□ -0.2
CCHCR1-203ENST00000396268 COMMD8Q9NX08 183 aa13.8□□□□□ -0.2
CCHCR1-203ENST00000396268 ZNF639Q9UID6 485 aa13.8□□□□□ -0.2
CCHCR1-203ENST00000396268 FKBPLQ9UIM3 349 aa13.8□□□□□ -0.2
CCHCR1-203ENST00000396268 ZMYM5Q9UJ78 669 aa13.8□□□□□ -0.2
CCHCR1-203ENST00000396268 GNPTGQ9UJJ9 305 aa13.8□□□□□ -0.2
CCHCR1-203ENST00000396268 PCDHB3Q9Y5E6 796 aa13.8□□□□□ -0.2
CCHCR1-203ENST00000396268 CPQQ9Y646 472 aa13.8□□□□□ -0.2
CCHCR1-203ENST00000396268 PDE4DIPQ5VU43 2346 aa13.8□□□□□ -0.2
CCHCR1-203ENST00000396268 H0Y858 1186 aa13.8□□□□□ -0.2
CCHCR1-203ENST00000396268 GPR39O43194 453 aa13.8□□□□□ -0.2
CCHCR1-203ENST00000396268 ALPLP05186 524 aa13.8□□□□□ -0.2
CCHCR1-203ENST00000396268 MC4RP32245 332 aa13.8□□□□□ -0.2
CCHCR1-203ENST00000396268 HPCAL1P37235 193 aa13.8□□□□□ -0.2
CCHCR1-203ENST00000396268 ZNF140P52738 457 aaPredicted RBP13.8□□□□□ -0.2
CCHCR1-203ENST00000396268 LBX1P52954 281 aa13.8□□□□□ -0.2
CCHCR1-203ENST00000396268 TPTEP56180 551 aa13.8□□□□□ -0.2
CCHCR1-203ENST00000396268 YBEYP58557 167 aaPredicted RBP13.8□□□□□ -0.2
CCHCR1-203ENST00000396268 IFITM3Q01628 133 aa13.8□□□□□ -0.2
CCHCR1-203ENST00000396268 PTPRRQ15256 657 aa13.8□□□□□ -0.2
CCHCR1-203ENST00000396268 SF3B4Q15427 424 aaKnown RBP eCLIP13.8□□□□□ -0.22e-6■■□□□ 13.8
CCHCR1-203ENST00000396268 KCNJ8Q15842 424 aa13.8□□□□□ -0.2
CCHCR1-203ENST00000396268 CRTC3Q6UUV7 619 aa13.8□□□□□ -0.2
CCHCR1-203ENST00000396268 CYP20A1Q6UW02 462 aa13.8□□□□□ -0.2
CCHCR1-203ENST00000396268 DLEU7Q6UYE1 221 aa13.8□□□□□ -0.2
CCHCR1-203ENST00000396268 TAS2R42Q7RTR8 314 aa13.8□□□□□ -0.2
CCHCR1-203ENST00000396268 C8orf59Q8N0T1 100 aaPredicted RBP13.8□□□□□ -0.2
CCHCR1-203ENST00000396268 FAM86B1Q8N7N1 296 aa13.8□□□□□ -0.2
CCHCR1-203ENST00000396268 TBCDQ9BTW9 1192 aa13.8□□□□□ -0.2
CCHCR1-203ENST00000396268 TLR9Q9NR96 1032 aa13.8□□□□□ -0.2
CCHCR1-203ENST00000396268 GIN1Q9NXP7 522 aa13.8□□□□□ -0.2
CCHCR1-203ENST00000396268 TMEM9Q9P0T7 183 aa13.8□□□□□ -0.2
CCHCR1-203ENST00000396268 KLQ9UEF7 1012 aa13.8□□□□□ -0.2
CCHCR1-203ENST00000396268 LIMD1Q9UGP4 676 aa13.8□□□□□ -0.2
CCHCR1-203ENST00000396268 PCDHGC4Q9Y5F7 938 aa13.8□□□□□ -0.2
CCHCR1-203ENST00000396268 G3V2T6 193 aa13.8□□□□□ -0.2
CCHCR1-203ENST00000396268 E2F3O00716 465 aa13.8□□□□□ -0.2
CCHCR1-203ENST00000396268 FSHRP23945 695 aa13.8□□□□□ -0.2
CCHCR1-203ENST00000396268 PLA2G16P53816 162 aa13.8□□□□□ -0.2
CCHCR1-203ENST00000396268 NFE2Q16621 373 aaPredicted RBP13.8□□□□□ -0.2
CCHCR1-203ENST00000396268 MEP1AQ16819 746 aa13.8□□□□□ -0.2
CCHCR1-203ENST00000396268 AP5B1Q2VPB7 878 aa13.8□□□□□ -0.2
CCHCR1-203ENST00000396268 PAGE2BQ5JRK9 111 aa13.8□□□□□ -0.2
CCHCR1-203ENST00000396268 RIMKLAQ8IXN7 391 aa13.8□□□□□ -0.2
CCHCR1-203ENST00000396268 ZFP90Q8TF47 636 aa13.8□□□□□ -0.2
CCHCR1-203ENST00000396268 TRUB1Q8WWH5 349 aaKnown RBP13.8□□□□□ -0.2
CCHCR1-203ENST00000396268 ALPK1Q96QP1 1244 aa13.8□□□□□ -0.2
CCHCR1-203ENST00000396268 TUBA1CQ9BQE3 449 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 134.2 ms