RNA–Protein interactions for RNA: ENST00000394573.5

SLC28A1-203, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-203ENST00000394573 SCYL2Q6P3W7 929 aa12.33□□□□□ -0.44
SLC28A1-203ENST00000394573 CLEC14AQ86T13 490 aa12.33□□□□□ -0.44
SLC28A1-203ENST00000394573 MICALL2Q8IY33 904 aa12.33□□□□□ -0.44
SLC28A1-203ENST00000394573 VWA5B2Q8N398 1253 aa12.33□□□□□ -0.44
SLC28A1-203ENST00000394573 ZNF669Q96BR6 464 aaPredicted RBP12.33□□□□□ -0.44
SLC28A1-203ENST00000394573 NPAS1Q99742 590 aa12.33□□□□□ -0.44
SLC28A1-203ENST00000394573 ITPAQ9BY32 194 aa12.33□□□□□ -0.44
SLC28A1-203ENST00000394573 POMKQ9H5K3 350 aa12.33□□□□□ -0.44
SLC28A1-203ENST00000394573 ESRP2Q9H6T0 727 aaKnown RBP12.33□□□□□ -0.44
SLC28A1-203ENST00000394573 CARS2Q9HA77 564 aaKnown RBP12.33□□□□□ -0.44
SLC28A1-203ENST00000394573 GALNT9Q9HCQ5 603 aa12.33□□□□□ -0.44
SLC28A1-203ENST00000394573 RPS10-NUDT3A0A1W2PQS6 291 aa12.33□□□□□ -0.44
SLC28A1-203ENST00000394573 OR2A25A4D2G3 310 aa12.33□□□□□ -0.44
SLC28A1-203ENST00000394573 CLDN24A6NM45 220 aa12.33□□□□□ -0.44
SLC28A1-203ENST00000394573 BTN3A1O00481 513 aa12.33□□□□□ -0.44
SLC28A1-203ENST00000394573 WDR47O94967 919 aa12.33□□□□□ -0.44
SLC28A1-203ENST00000394573 CDK1P06493 297 aa12.33□□□□□ -0.44
SLC28A1-203ENST00000394573 SPRP35270 261 aaPredicted RBP12.33□□□□□ -0.44
SLC28A1-203ENST00000394573 CYP24A1Q07973 514 aa12.33□□□□□ -0.44
SLC28A1-203ENST00000394573 NFYCQ13952 458 aa12.33□□□□□ -0.44
SLC28A1-203ENST00000394573 FRG1Q14331 258 aaKnown RBP12.33□□□□□ -0.44
SLC28A1-203ENST00000394573 QPRTQ15274 297 aa12.33□□□□□ -0.44
SLC28A1-203ENST00000394573 DENND1BQ6P3S1 775 aa12.33□□□□□ -0.44
SLC28A1-203ENST00000394573 DPP8Q6V1X1 898 aaPredicted RBP12.33□□□□□ -0.44
SLC28A1-203ENST00000394573 NIPA1Q7RTP0 329 aa12.33□□□□□ -0.44
SLC28A1-203ENST00000394573 TMEM179BQ7Z7N9 219 aa12.33□□□□□ -0.44
SLC28A1-203ENST00000394573 DENND1CQ8IV53 801 aa12.33□□□□□ -0.44
SLC28A1-203ENST00000394573 WDTC1Q8N5D0 677 aa12.33□□□□□ -0.44
SLC28A1-203ENST00000394573 TXNDC5Q8NBS9 432 aaKnown RBP12.33□□□□□ -0.44
SLC28A1-203ENST00000394573 NANPQ8TBE9 248 aa12.33□□□□□ -0.44
SLC28A1-203ENST00000394573 ROPN1LQ96C74 230 aa12.33□□□□□ -0.44
SLC28A1-203ENST00000394573 WDR18Q9BV38 432 aa12.33□□□□□ -0.44
SLC28A1-203ENST00000394573 SLC22A4Q9H015 551 aa12.33□□□□□ -0.44
SLC28A1-203ENST00000394573 STARD7Q9NQZ5 370 aa12.33□□□□□ -0.44
SLC28A1-203ENST00000394573 GINS2Q9Y248 185 aa12.33□□□□□ -0.44
SLC28A1-203ENST00000394573 PCDHGB1Q9Y5G3 927 aa12.33□□□□□ -0.44
SLC28A1-203ENST00000394573 COL4A1P02462 1669 aa12.32□□□□□ -0.44
SLC28A1-203ENST00000394573 ADAMTSL3P82987 1691 aa12.32□□□□□ -0.44
SLC28A1-203ENST00000394573 SCN7AQ01118 1682 aa12.32□□□□□ -0.44
SLC28A1-203ENST00000394573 M0R082 166 aa12.32□□□□□ -0.44
SLC28A1-203ENST00000394573 FABP7O15540 132 aa12.32□□□□□ -0.44
SLC28A1-203ENST00000394573 SULT1B1O43704 296 aa12.32□□□□□ -0.44
SLC28A1-203ENST00000394573 CST1P01037 141 aa12.32□□□□□ -0.44
SLC28A1-203ENST00000394573 SOX10P56693 466 aa12.32□□□□□ -0.44
SLC28A1-203ENST00000394573 S100A12P80511 92 aa12.32□□□□□ -0.44
SLC28A1-203ENST00000394573 CNTN2Q02246 1040 aa12.32□□□□□ -0.44
SLC28A1-203ENST00000394573 EXOSC2Q13868 293 aaKnown RBP12.32□□□□□ -0.44
SLC28A1-203ENST00000394573 GRK1Q15835 563 aa12.32□□□□□ -0.44
SLC28A1-203ENST00000394573 ZNF79Q15937 498 aa12.32□□□□□ -0.44
SLC28A1-203ENST00000394573 TSTD2Q5T7W7 516 aa12.32□□□□□ -0.44
SLC28A1-203ENST00000394573 XKRXQ6PP77 449 aa12.32□□□□□ -0.44
SLC28A1-203ENST00000394573 OR10Q1Q8NGQ4 319 aa12.32□□□□□ -0.44
SLC28A1-203ENST00000394573 GOT1L1Q8NHS2 421 aaPredicted RBP12.32□□□□□ -0.44
SLC28A1-203ENST00000394573 ENKURQ8TC29 256 aa12.32□□□□□ -0.44
SLC28A1-203ENST00000394573 RXFP2Q8WXD0 754 aa12.32□□□□□ -0.44
SLC28A1-203ENST00000394573 TMEM125Q96AQ2 219 aa12.32□□□□□ -0.44
SLC28A1-203ENST00000394573 MYO19Q96H55 970 aa12.32□□□□□ -0.44
SLC28A1-203ENST00000394573 TNIP3Q96KP6 325 aa12.32□□□□□ -0.44
SLC28A1-203ENST00000394573 CCDC32Q9BV29 185 aa12.32□□□□□ -0.44
SLC28A1-203ENST00000394573 ZC3H12CQ9C0D7 883 aaKnown RBP12.32□□□□□ -0.44
SLC28A1-203ENST00000394573 ZDHHC4Q9NPG8 344 aa12.32□□□□□ -0.44
SLC28A1-203ENST00000394573 SCN3BQ9NY72 215 aa12.32□□□□□ -0.44
SLC28A1-203ENST00000394573 TPRKBQ9Y3C4 175 aa12.32□□□□□ -0.44
SLC28A1-203ENST00000394573 PTPRJQ12913 1337 aa12.32□□□□□ -0.44
SLC28A1-203ENST00000394573 MRPS14O60783 128 aaKnown RBP12.32□□□□□ -0.44
SLC28A1-203ENST00000394573 GRAP2O75791 330 aa12.32□□□□□ -0.44
SLC28A1-203ENST00000394573 HRGP04196 525 aa12.32□□□□□ -0.44
SLC28A1-203ENST00000394573 NUP62P37198 522 aaPredicted RBP12.32□□□□□ -0.44
SLC28A1-203ENST00000394573 GNPDA1P46926 289 aa12.32□□□□□ -0.44
SLC28A1-203ENST00000394573 CLCNKAP51800 687 aa12.32□□□□□ -0.44
SLC28A1-203ENST00000394573 LIMK2P53671 638 aa12.32□□□□□ -0.44
SLC28A1-203ENST00000394573 GPR19Q15760 415 aa12.32□□□□□ -0.44
SLC28A1-203ENST00000394573 TAZQ16635 292 aa12.32□□□□□ -0.44
SLC28A1-203ENST00000394573 TDRD10Q5VZ19 366 aaKnown RBP12.32□□□□□ -0.44
SLC28A1-203ENST00000394573 ERICH5Q6P6B1 374 aa12.32□□□□□ -0.44
SLC28A1-203ENST00000394573 ATRAIDQ6UW56 229 aa12.32□□□□□ -0.44
SLC28A1-203ENST00000394573 FAM183BPQ6ZVS7 135 aa12.32□□□□□ -0.44
SLC28A1-203ENST00000394573 RNF135Q8IUD6 432 aa12.32□□□□□ -0.44
SLC28A1-203ENST00000394573 LIX1LQ8IVB5 337 aa12.32□□□□□ -0.44
SLC28A1-203ENST00000394573 LAX1Q8IWV1 398 aa12.32□□□□□ -0.44
SLC28A1-203ENST00000394573 FAM217AQ8IXS0 508 aa12.32□□□□□ -0.44
SLC28A1-203ENST00000394573 YIPF5Q969M3 257 aa12.32□□□□□ -0.44
SLC28A1-203ENST00000394573 GPRASP2Q96D09 838 aa12.32□□□□□ -0.44
SLC28A1-203ENST00000394573 NSMCE2Q96MF7 247 aa12.32□□□□□ -0.44
SLC28A1-203ENST00000394573 MCCC1Q96RQ3 725 aaPredicted RBP12.32□□□□□ -0.44
SLC28A1-203ENST00000394573 MLPHQ9BV36 600 aaPredicted RBP12.32□□□□□ -0.44
SLC28A1-203ENST00000394573 ZNF768Q9H5H4 540 aaKnown RBP12.32□□□□□ -0.44
SLC28A1-203ENST00000394573 ACAD9Q9H845 621 aa12.32□□□□□ -0.44
SLC28A1-203ENST00000394573 SLC39A1Q9NY26 324 aa12.32□□□□□ -0.44
SLC28A1-203ENST00000394573 MAP3K20Q9NYL2 800 aaKnown RBP12.32□□□□□ -0.44
SLC28A1-203ENST00000394573 MGAT4AQ9UM21 535 aa12.32□□□□□ -0.44
SLC28A1-203ENST00000394573 BAIAP2Q9UQB8 552 aa12.32□□□□□ -0.44
SLC28A1-203ENST00000394573 NDUFAF1Q9Y375 327 aa12.32□□□□□ -0.44
SLC28A1-203ENST00000394573 PCDHB5Q9Y5E4 795 aa12.32□□□□□ -0.44
SLC28A1-203ENST00000394573 CNTNAP4Q9C0A0 1308 aa12.32□□□□□ -0.44
SLC28A1-203ENST00000394573 RGPD5Q99666 1765 aa12.31□□□□□ -0.44
SLC28A1-203ENST00000394573 CABYRO75952 493 aa12.31□□□□□ -0.44
SLC28A1-203ENST00000394573 PAPSS2O95340 614 aaPredicted RBP12.31□□□□□ -0.44
SLC28A1-203ENST00000394573 TNNC2P02585 160 aa12.31□□□□□ -0.44
SLC28A1-203ENST00000394573 ALPPP05187 535 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms